HEADER CELL ADHESION, CELL CYCLE 16-MAY-05 1X5Q TITLE SOLUTION STRUCTURE OF THE FIRST PDZ DOMAIN OF SCRIBBLE TITLE 2 HOMOLOG PROTEIN (HSCRIB) COMPND MOL_ID: 1; COMPND 2 MOLECULE: LAP4 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: PDZ DOMAIN; COMPND 5 SYNONYM: SCRIBBLE HOMOLOG PROTEIN, HSCRIB; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SCRIB, CRIB1, KIAA0147, LAP4, SCRB1, VARTUL; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P040628-05; SOURCE 8 OTHER_DETAILS: CELL FREE PROTEIN SYNTHESIS KEYWDS PDZ DOMAIN, LAP4 PROTEIN, SCRIBBLE HOMOLOG PROTEIN, HSCRIB, KEYWDS 2 STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN KEYWDS 3 STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL KEYWDS 4 GENOMICS/PROTEOMICS INITIATIVE, RSGI, CELL ADHESION, CELL KEYWDS 5 CYCLE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR X.R.QIN,T.NAGASHIMA,F.HAYASHI,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 2 24-FEB-09 1X5Q 1 VERSN REVDAT 1 16-NOV-05 1X5Q 0 JRNL AUTH X.R.QIN,T.NAGASHIMA,F.HAYASHI,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE FIRST PDZ DOMAIN OF JRNL TITL 2 SCRIBBLE HOMOLOG PROTEIN (HSCRIB) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 1.0.7 REMARK 3 AUTHORS : GUNTERT,P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1X5Q COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 23-MAY-05. REMARK 100 THE RCSB ID CODE IS RCSB024412. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.20MM 13C, 15N-LABELED REMARK 210 PROTEIN; 20MM D-TRIS-HCL; REMARK 210 100MM NACL; 1MM D-DTT; 0.02% REMARK 210 NAN3 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ, 900 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : VNMR 6.1C, NMRPIPE 20031121, REMARK 210 NMRVIEW 5.0.4, KUJIRA 0.9296, REMARK 210 CYANA 1.0.7 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION, STRUCTURES REMARK 210 WITH THE LOWEST ENERGY, REMARK 210 STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: SPECTROMETER_ID 1 FOR 3D_15N_SEPARATED_NOESY; REMARK 210 SPECTROMETER_ID 2 FOR 3D_13C_SEPARATED_NOESY REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 5 -58.33 -127.90 REMARK 500 1 GLU A 8 88.13 49.33 REMARK 500 1 GLU A 13 138.52 -176.91 REMARK 500 1 GLU A 14 147.71 -38.17 REMARK 500 1 GLU A 56 72.64 -105.09 REMARK 500 1 ALA A 93 135.77 -174.58 REMARK 500 1 THR A 95 -78.11 -38.20 REMARK 500 1 SER A 105 103.30 -49.82 REMARK 500 1 SER A 109 -79.42 62.82 REMARK 500 2 ALA A 10 171.12 -58.38 REMARK 500 2 GLU A 13 138.95 -176.62 REMARK 500 2 GLU A 14 155.11 -38.58 REMARK 500 2 GLN A 24 73.22 -112.20 REMARK 500 2 THR A 25 46.15 36.22 REMARK 500 2 ALA A 33 112.28 -160.15 REMARK 500 2 LYS A 42 -80.53 -104.83 REMARK 500 2 GLU A 56 42.14 -107.34 REMARK 500 2 GLN A 79 -84.05 -38.77 REMARK 500 2 THR A 95 -78.64 -41.19 REMARK 500 2 SER A 108 91.55 47.99 REMARK 500 2 SER A 109 157.97 66.27 REMARK 500 3 SER A 3 108.07 -176.67 REMARK 500 3 GLU A 13 130.22 -170.32 REMARK 500 3 GLU A 14 146.93 -38.77 REMARK 500 3 GLN A 24 116.00 171.19 REMARK 500 3 THR A 25 44.01 38.85 REMARK 500 3 LEU A 28 -179.68 73.49 REMARK 500 3 SER A 38 165.62 177.01 REMARK 500 3 LYS A 42 -84.40 -103.50 REMARK 500 3 GLU A 46 46.93 -91.05 REMARK 500 3 SER A 54 109.57 -53.40 REMARK 500 3 GLU A 56 42.29 -98.32 REMARK 500 3 THR A 95 -81.72 -39.91 REMARK 500 4 GLU A 14 145.49 -37.17 REMARK 500 4 GLN A 24 -55.13 -134.09 REMARK 500 4 LEU A 28 174.71 53.00 REMARK 500 4 LYS A 36 -107.19 -73.31 REMARK 500 4 LYS A 42 -71.88 -108.03 REMARK 500 4 SER A 54 107.36 -49.65 REMARK 500 4 GLU A 56 37.79 -96.62 REMARK 500 4 THR A 95 -81.69 -38.35 REMARK 500 5 SER A 6 159.78 -41.63 REMARK 500 5 GLU A 8 108.09 -163.80 REMARK 500 5 GLU A 13 134.92 -176.98 REMARK 500 5 GLN A 24 -59.00 -171.04 REMARK 500 5 LEU A 28 177.89 59.83 REMARK 500 5 ALA A 33 118.26 -166.35 REMARK 500 5 SER A 54 107.41 -49.82 REMARK 500 5 GLU A 56 50.25 -94.17 REMARK 500 5 LEU A 78 35.66 -92.50 REMARK 500 5 SER A 109 89.65 178.22 REMARK 500 6 SER A 5 106.66 58.09 REMARK 500 6 GLU A 13 137.76 -177.13 REMARK 500 6 GLU A 14 156.79 -39.16 REMARK 500 6 GLN A 24 -45.04 -153.69 REMARK 500 6 LEU A 28 -169.75 71.91 REMARK 500 6 GLU A 46 49.35 -84.61 REMARK 500 6 LEU A 78 41.41 -105.66 REMARK 500 6 ALA A 93 133.07 -173.05 REMARK 500 6 THR A 95 -82.10 -38.86 REMARK 500 7 GLU A 8 136.77 64.26 REMARK 500 7 GLU A 13 139.88 -177.95 REMARK 500 7 GLU A 14 149.83 -38.19 REMARK 500 7 GLN A 24 -94.49 -115.36 REMARK 500 7 THR A 25 -75.42 -93.99 REMARK 500 7 LEU A 28 127.81 62.16 REMARK 500 7 GLU A 56 51.59 -101.06 REMARK 500 7 LEU A 78 30.84 -99.77 REMARK 500 7 THR A 95 -82.33 -39.20 REMARK 500 7 SER A 108 130.29 -39.62 REMARK 500 8 SER A 2 99.58 54.01 REMARK 500 8 SER A 5 153.91 65.80 REMARK 500 8 ALA A 10 175.96 53.27 REMARK 500 8 GLU A 13 138.68 -178.06 REMARK 500 8 GLU A 14 150.58 -38.18 REMARK 500 8 ARG A 23 82.09 -60.18 REMARK 500 8 THR A 25 44.91 34.37 REMARK 500 8 LYS A 36 161.51 -49.77 REMARK 500 8 ASP A 44 78.04 -67.98 REMARK 500 8 GLU A 46 49.63 -83.40 REMARK 500 8 GLN A 79 -76.74 -36.18 REMARK 500 8 SER A 108 -55.37 -140.59 REMARK 500 8 SER A 109 -75.06 -62.18 REMARK 500 9 SER A 2 138.47 71.04 REMARK 500 9 SER A 6 124.26 -172.40 REMARK 500 9 ARG A 11 146.45 62.12 REMARK 500 9 GLU A 13 137.22 -172.43 REMARK 500 9 GLU A 14 157.36 -38.91 REMARK 500 9 THR A 25 -70.88 -176.93 REMARK 500 9 LEU A 28 174.10 55.94 REMARK 500 9 LYS A 42 -78.74 -123.89 REMARK 500 9 ASP A 44 78.19 -64.62 REMARK 500 9 SER A 54 108.80 -51.00 REMARK 500 9 ALA A 93 128.81 -174.69 REMARK 500 9 THR A 95 -74.28 -40.75 REMARK 500 9 SER A 108 -57.91 -128.93 REMARK 500 9 SER A 109 114.66 -162.87 REMARK 500 10 ARG A 11 142.10 65.66 REMARK 500 10 GLU A 13 139.92 -178.01 REMARK 500 10 GLU A 14 154.49 -37.82 REMARK 500 10 GLN A 24 -73.50 -167.45 REMARK 500 10 LEU A 28 173.61 70.09 REMARK 500 10 LYS A 36 108.97 -40.27 REMARK 500 10 SER A 38 167.85 176.90 REMARK 500 10 ASP A 44 64.75 -103.17 REMARK 500 10 SER A 54 107.59 -45.58 REMARK 500 10 GLU A 56 36.51 -97.96 REMARK 500 10 LEU A 78 31.78 -96.57 REMARK 500 10 ALA A 93 134.09 -179.19 REMARK 500 10 THR A 95 -81.39 -46.50 REMARK 500 10 SER A 105 92.64 -161.90 REMARK 500 11 SER A 6 157.75 -48.53 REMARK 500 11 GLU A 13 133.71 -176.26 REMARK 500 11 GLU A 14 156.52 -45.08 REMARK 500 11 GLN A 24 -47.20 176.99 REMARK 500 11 LEU A 28 -171.45 68.86 REMARK 500 11 SER A 38 170.25 -54.69 REMARK 500 11 LYS A 42 -78.64 -86.84 REMARK 500 11 GLU A 46 44.15 -87.76 REMARK 500 11 SER A 54 109.11 -46.07 REMARK 500 11 THR A 95 -71.40 -53.22 REMARK 500 11 SER A 108 99.39 -171.28 REMARK 500 12 SER A 3 165.05 178.42 REMARK 500 12 GLU A 13 136.99 -174.78 REMARK 500 12 GLU A 14 155.39 -37.77 REMARK 500 12 THR A 25 91.28 40.09 REMARK 500 12 SER A 54 106.87 -45.79 REMARK 500 12 GLU A 56 66.84 -108.28 REMARK 500 12 LEU A 71 -42.20 -131.53 REMARK 500 12 THR A 95 -75.88 -44.66 REMARK 500 12 SER A 109 -71.45 66.84 REMARK 500 13 SER A 3 -57.62 -121.60 REMARK 500 13 GLU A 8 115.35 65.40 REMARK 500 13 GLU A 13 136.03 -173.96 REMARK 500 13 GLU A 14 148.43 -39.18 REMARK 500 13 ARG A 23 85.43 -67.51 REMARK 500 13 THR A 25 -160.20 41.61 REMARK 500 13 LEU A 28 176.09 -50.60 REMARK 500 13 SER A 38 173.20 -59.93 REMARK 500 13 LYS A 42 -79.97 -103.61 REMARK 500 13 GLU A 56 55.09 -97.33 REMARK 500 13 GLN A 79 -97.24 -54.77 REMARK 500 13 THR A 95 -74.14 -47.66 REMARK 500 14 GLU A 8 156.35 -42.02 REMARK 500 14 ARG A 11 149.25 65.92 REMARK 500 14 GLU A 13 138.37 -177.49 REMARK 500 14 GLU A 14 153.56 -38.80 REMARK 500 14 GLU A 56 59.59 -97.22 REMARK 500 14 GLN A 79 89.91 -68.69 REMARK 500 14 ALA A 93 141.56 -173.08 REMARK 500 14 THR A 95 -79.56 -39.10 REMARK 500 14 SER A 105 100.56 -169.28 REMARK 500 14 SER A 108 133.05 -172.04 REMARK 500 15 SER A 5 156.17 62.49 REMARK 500 15 ARG A 11 145.65 65.87 REMARK 500 15 GLU A 13 139.36 -177.53 REMARK 500 15 GLU A 14 152.35 -38.00 REMARK 500 15 GLN A 24 -52.48 -161.30 REMARK 500 15 THR A 25 -49.13 -148.67 REMARK 500 15 LEU A 28 168.25 56.54 REMARK 500 15 LYS A 42 -80.84 -103.84 REMARK 500 15 LEU A 78 42.57 -108.10 REMARK 500 15 THR A 95 -73.53 -38.31 REMARK 500 15 SER A 109 166.36 56.16 REMARK 500 16 SER A 3 156.27 -42.35 REMARK 500 16 SER A 6 169.41 58.54 REMARK 500 16 GLU A 8 92.86 -166.48 REMARK 500 16 GLU A 13 140.48 -177.89 REMARK 500 16 GLU A 14 157.55 -38.38 REMARK 500 16 THR A 25 71.67 36.42 REMARK 500 16 LYS A 36 -111.28 -86.39 REMARK 500 16 SER A 54 107.18 -48.28 REMARK 500 16 GLU A 56 38.63 -94.67 REMARK 500 16 ALA A 81 136.25 -39.75 REMARK 500 16 THR A 95 -74.28 -39.64 REMARK 500 16 SER A 109 90.74 64.51 REMARK 500 17 GLU A 13 141.21 -178.04 REMARK 500 17 GLU A 14 144.90 -37.25 REMARK 500 17 GLN A 24 -59.77 -158.99 REMARK 500 17 THR A 25 -63.25 -135.98 REMARK 500 17 LEU A 28 169.23 54.93 REMARK 500 17 ALA A 33 113.10 -163.51 REMARK 500 17 SER A 38 155.64 -44.29 REMARK 500 17 LYS A 42 -86.55 -101.52 REMARK 500 17 ALA A 93 139.78 -171.29 REMARK 500 17 THR A 95 -81.99 -40.61 REMARK 500 17 SER A 105 99.02 -58.76 REMARK 500 17 SER A 108 -61.98 -161.14 REMARK 500 18 GLU A 8 83.20 -158.04 REMARK 500 18 GLU A 13 136.65 -176.02 REMARK 500 18 GLU A 14 164.24 -48.29 REMARK 500 18 GLN A 24 -63.42 -140.79 REMARK 500 18 LEU A 28 -159.27 -71.38 REMARK 500 18 SER A 54 108.61 -46.64 REMARK 500 18 GLU A 56 52.41 -98.63 REMARK 500 18 ALA A 93 144.60 -176.82 REMARK 500 18 THR A 95 -71.63 -41.96 REMARK 500 18 SER A 108 96.88 -177.48 REMARK 500 18 SER A 109 98.41 50.20 REMARK 500 19 GLU A 13 134.37 -176.89 REMARK 500 19 GLU A 14 165.69 -44.89 REMARK 500 19 GLN A 24 99.32 -166.17 REMARK 500 19 THR A 25 47.06 37.61 REMARK 500 19 THR A 95 -81.07 -38.47 REMARK 500 19 SER A 105 105.54 -161.13 REMARK 500 19 SER A 109 -59.23 -169.53 REMARK 500 20 SER A 2 113.75 59.71 REMARK 500 20 GLU A 8 82.46 58.05 REMARK 500 20 GLU A 13 135.90 -171.53 REMARK 500 20 GLU A 14 152.47 -38.26 REMARK 500 20 THR A 25 98.82 -55.49 REMARK 500 20 LYS A 42 -79.44 -105.12 REMARK 500 20 ASP A 44 -58.97 76.06 REMARK 500 20 ASP A 45 100.32 -50.03 REMARK 500 20 GLU A 56 53.58 -90.97 REMARK 500 20 GLN A 79 72.15 -104.08 REMARK 500 20 ALA A 93 137.70 -176.02 REMARK 500 20 THR A 95 -80.62 -38.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSK002300144.1 RELATED DB: TARGETDB DBREF 1X5Q A 8 104 UNP Q14160 LAP4_HUMAN 718 814 SEQADV 1X5Q GLY A 1 UNP Q14160 CLONING ARTIFACT SEQADV 1X5Q SER A 2 UNP Q14160 CLONING ARTIFACT SEQADV 1X5Q SER A 3 UNP Q14160 CLONING ARTIFACT SEQADV 1X5Q GLY A 4 UNP Q14160 CLONING ARTIFACT SEQADV 1X5Q SER A 5 UNP Q14160 CLONING ARTIFACT SEQADV 1X5Q SER A 6 UNP Q14160 CLONING ARTIFACT SEQADV 1X5Q GLY A 7 UNP Q14160 CLONING ARTIFACT SEQADV 1X5Q SER A 105 UNP Q14160 CLONING ARTIFACT SEQADV 1X5Q GLY A 106 UNP Q14160 CLONING ARTIFACT SEQADV 1X5Q PRO A 107 UNP Q14160 CLONING ARTIFACT SEQADV 1X5Q SER A 108 UNP Q14160 CLONING ARTIFACT SEQADV 1X5Q SER A 109 UNP Q14160 CLONING ARTIFACT SEQADV 1X5Q GLY A 110 UNP Q14160 CLONING ARTIFACT SEQRES 1 A 110 GLY SER SER GLY SER SER GLY GLU PRO ALA ARG ILE GLU SEQRES 2 A 110 GLU GLU GLU LEU THR LEU THR ILE LEU ARG GLN THR GLY SEQRES 3 A 110 GLY LEU GLY ILE SER ILE ALA GLY GLY LYS GLY SER THR SEQRES 4 A 110 PRO TYR LYS GLY ASP ASP GLU GLY ILE PHE ILE SER ARG SEQRES 5 A 110 VAL SER GLU GLU GLY PRO ALA ALA ARG ALA GLY VAL ARG SEQRES 6 A 110 VAL GLY ASP LYS LEU LEU GLU VAL ASN GLY VAL ALA LEU SEQRES 7 A 110 GLN GLY ALA GLU HIS HIS GLU ALA VAL GLU ALA LEU ARG SEQRES 8 A 110 GLY ALA GLY THR ALA VAL GLN MET ARG VAL TRP ARG GLU SEQRES 9 A 110 SER GLY PRO SER SER GLY HELIX 1 1 GLY A 57 GLY A 63 1 7 HELIX 2 2 GLU A 82 GLY A 92 1 11 SHEET 1 A 5 GLU A 15 LEU A 22 0 SHEET 2 A 5 ALA A 96 ARG A 103 -1 O VAL A 97 N ILE A 21 SHEET 3 A 5 LYS A 69 VAL A 73 -1 N LEU A 71 O ARG A 100 SHEET 4 A 5 ILE A 48 VAL A 53 -1 N ILE A 48 O LEU A 70 SHEET 5 A 5 ILE A 30 GLY A 34 -1 N SER A 31 O SER A 51 SHEET 1 B 4 GLU A 15 LEU A 22 0 SHEET 2 B 4 ALA A 96 ARG A 103 -1 O VAL A 97 N ILE A 21 SHEET 3 B 4 LYS A 69 VAL A 73 -1 N LEU A 71 O ARG A 100 SHEET 4 B 4 VAL A 76 ALA A 77 -1 O VAL A 76 N VAL A 73 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL MASTER 293 0 0 2 9 0 0 6 0 0 0 9 END