HEADER CELL ADHESION 15-MAY-05 1X4Z TITLE SOLUTION STRUCTURE OF THE 2ND FIBRONECTIN TYPE III DOMAIN TITLE 2 FROM MOUSE BIREGIONAL CELL ADHESION MOLECULE-RELATED/DOWN- TITLE 3 REGULATED ONCOGENES (CDON) BINDING PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: BIREGIONAL CELL ADHESION MOLECULE-RELATED/DOWN- COMPND 3 REGULATED ONCOGENES (CDON)BINDING PROTEIN; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: FIBRONECTIN TYPE III (FN3) DOMAIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: BOC; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P040719-11; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS FIBRONECTIN TYPE III, FN3, IMMUNOGLOBULIN-LIKE BETA- KEYWDS 2 SANDWICH FOLD, CELL ADHESION, STRUCTURAL GENOMICS, NPPSFA, KEYWDS 3 NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL KEYWDS 4 ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, KEYWDS 5 RSGI EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR T.TOMIZAWA,T.KIGAWA,S.KOSHIBA,M.INOUE,S.YOKOYAMA,RIKEN AUTHOR 2 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 2 24-FEB-09 1X4Z 1 VERSN REVDAT 1 15-NOV-05 1X4Z 0 JRNL AUTH T.TOMIZAWA,T.KIGAWA,S.KOSHIBA,M.INOUE,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE 2ND FIBRONECTIN TYPE III JRNL TITL 2 DOMAIN FROM MOUSE BIREGIONAL CELL ADHESION JRNL TITL 3 MOLECULE-RELATED/DOWN-REGULATED ONCOGENES (CDON) JRNL TITL 4 BINDING PROTEIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0.17 REMARK 3 AUTHORS : GUNTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1X4Z COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-MAY-05. REMARK 100 THE RCSB ID CODE IS RCSB024385. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 296 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.43MM FN3 DOMAIN U-15N,13C; REMARK 210 20MM D-TRIS-HCL; 100MM NACL; REMARK 210 1MM D-DTT; 0.02% NAN3; 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 2.6, NMRPIPE REMARK 210 20030801, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9295, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS, REMARK 210 RESTRAINTED MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION, STRUCTURES REMARK 210 WITH THE LOWEST ENERGY, REMARK 210 STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 2 42.27 38.10 REMARK 500 1 SER A 6 43.36 37.42 REMARK 500 1 PRO A 10 98.03 -69.73 REMARK 500 1 ARG A 14 90.62 -67.42 REMARK 500 1 ASP A 22 176.07 -50.45 REMARK 500 1 ASP A 63 -179.83 -52.15 REMARK 500 1 ALA A 67 -71.58 -87.92 REMARK 500 1 SER A 108 171.55 -51.31 REMARK 500 1 SER A 116 43.93 -87.41 REMARK 500 1 PRO A 118 -168.24 -69.70 REMARK 500 2 PRO A 10 96.68 -69.65 REMARK 500 2 ASP A 11 -177.87 -174.71 REMARK 500 2 HIS A 12 96.36 -40.62 REMARK 500 2 ARG A 14 91.19 -67.39 REMARK 500 2 ASP A 22 175.04 -51.57 REMARK 500 2 ARG A 41 -69.33 -94.54 REMARK 500 2 LEU A 58 -70.85 -78.67 REMARK 500 2 ALA A 67 -69.86 -95.62 REMARK 500 2 PRO A 107 94.29 -69.66 REMARK 500 2 SER A 108 165.37 -43.26 REMARK 500 2 SER A 116 50.56 -96.23 REMARK 500 2 PRO A 118 94.78 -69.73 REMARK 500 2 SER A 119 101.60 -35.89 REMARK 500 3 PRO A 10 -170.82 -69.77 REMARK 500 3 ARG A 14 79.43 -66.71 REMARK 500 3 ASP A 22 174.01 -49.78 REMARK 500 3 ARG A 41 -69.88 -107.39 REMARK 500 3 ASP A 63 177.04 -52.02 REMARK 500 3 SER A 108 170.31 -47.27 REMARK 500 3 PRO A 118 2.05 -69.74 REMARK 500 3 SER A 119 119.98 -38.57 REMARK 500 4 PRO A 10 5.56 -69.78 REMARK 500 4 ARG A 14 96.14 -47.87 REMARK 500 4 ASP A 22 175.78 -48.46 REMARK 500 4 ARG A 41 -69.48 -102.74 REMARK 500 4 ALA A 67 -71.69 -91.51 REMARK 500 4 PRO A 107 99.50 -69.77 REMARK 500 4 SER A 108 162.80 -44.80 REMARK 500 4 SER A 114 44.21 -99.89 REMARK 500 5 SER A 8 95.89 -44.77 REMARK 500 5 PRO A 10 -167.79 -69.76 REMARK 500 5 ASP A 11 48.16 -79.40 REMARK 500 5 ASP A 22 174.49 -47.36 REMARK 500 5 ALA A 70 32.83 72.01 REMARK 500 5 SER A 105 152.18 -48.21 REMARK 500 5 SER A 108 157.17 -48.45 REMARK 500 5 ARG A 109 151.60 -49.57 REMARK 500 6 PRO A 10 3.85 -69.77 REMARK 500 6 ASP A 22 177.24 -53.97 REMARK 500 6 ARG A 41 -67.76 -94.16 REMARK 500 6 LEU A 58 -71.31 -91.73 REMARK 500 6 MET A 98 1.45 -69.48 REMARK 500 6 SER A 105 150.52 -45.94 REMARK 500 6 PRO A 107 97.66 -69.72 REMARK 500 6 SER A 108 154.46 -43.53 REMARK 500 6 PRO A 118 3.96 -69.92 REMARK 500 7 GLN A 9 154.65 -39.66 REMARK 500 7 PRO A 10 3.94 -69.75 REMARK 500 7 ASP A 22 174.52 -49.39 REMARK 500 7 ARG A 41 -69.68 -103.58 REMARK 500 7 LEU A 58 -65.46 -96.31 REMARK 500 7 ASP A 63 -175.85 -59.88 REMARK 500 7 ALA A 67 -71.33 -91.41 REMARK 500 7 MET A 98 0.78 -68.98 REMARK 500 7 SER A 105 158.88 -47.95 REMARK 500 7 PRO A 107 96.89 -69.68 REMARK 500 7 SER A 108 160.04 -47.21 REMARK 500 8 PRO A 10 3.23 -69.66 REMARK 500 8 ARG A 14 89.21 -63.42 REMARK 500 8 ASP A 22 174.32 -50.42 REMARK 500 8 LYS A 59 35.11 -91.81 REMARK 500 8 ASP A 63 -175.18 -60.06 REMARK 500 8 SER A 108 163.88 -46.10 REMARK 500 8 PRO A 118 90.36 -69.74 REMARK 500 8 SER A 120 -43.78 -133.09 REMARK 500 9 PRO A 10 -175.17 -69.80 REMARK 500 9 ASP A 22 174.77 -51.27 REMARK 500 9 ARG A 41 -70.41 -93.00 REMARK 500 9 LEU A 58 -70.71 -87.48 REMARK 500 9 LYS A 59 -38.38 -34.72 REMARK 500 9 ALA A 67 -69.00 -90.19 REMARK 500 9 SER A 105 153.85 -43.93 REMARK 500 9 PRO A 107 98.05 -69.74 REMARK 500 9 SER A 108 151.24 -45.80 REMARK 500 9 ARG A 109 156.18 -45.57 REMARK 500 9 SER A 114 43.01 -104.84 REMARK 500 10 PRO A 10 82.96 -69.86 REMARK 500 10 ASP A 22 174.15 -49.51 REMARK 500 10 ARG A 41 -69.14 -109.43 REMARK 500 10 LEU A 58 -68.55 -90.37 REMARK 500 10 LYS A 59 -31.28 -39.45 REMARK 500 10 ALA A 67 -69.84 -94.16 REMARK 500 10 MET A 98 0.65 -68.72 REMARK 500 10 SER A 105 154.57 -46.32 REMARK 500 10 PRO A 107 92.98 -69.79 REMARK 500 10 ARG A 109 150.22 -44.62 REMARK 500 10 SER A 114 -60.07 -91.62 REMARK 500 10 PRO A 118 1.83 -69.77 REMARK 500 10 SER A 119 51.32 74.51 REMARK 500 11 HIS A 12 152.73 -35.86 REMARK 500 11 ARG A 14 95.73 -57.10 REMARK 500 11 ASP A 22 175.39 -52.44 REMARK 500 11 ARG A 41 -70.44 -100.32 REMARK 500 11 LYS A 59 35.54 -91.89 REMARK 500 11 ASP A 63 -179.42 -50.34 REMARK 500 11 MET A 98 0.73 -69.03 REMARK 500 11 SER A 105 151.95 -44.31 REMARK 500 11 PRO A 107 97.11 -69.79 REMARK 500 11 SER A 108 159.59 -48.30 REMARK 500 11 SER A 114 50.01 -114.67 REMARK 500 12 HIS A 12 99.53 -65.21 REMARK 500 12 ARG A 14 91.09 -48.00 REMARK 500 12 ASP A 22 177.95 -50.00 REMARK 500 12 ARG A 41 -70.45 -103.31 REMARK 500 12 LEU A 58 -61.85 -91.13 REMARK 500 12 LYS A 59 -36.45 -37.40 REMARK 500 12 ASP A 63 -176.45 -52.34 REMARK 500 12 ALA A 67 -64.71 -92.52 REMARK 500 12 MET A 98 1.56 -69.84 REMARK 500 12 PRO A 107 98.06 -69.75 REMARK 500 12 SER A 108 164.75 -45.19 REMARK 500 12 SER A 116 136.94 -36.52 REMARK 500 12 PRO A 118 -169.27 -69.66 REMARK 500 13 ASP A 22 174.26 -51.67 REMARK 500 13 ARG A 41 -70.34 -109.81 REMARK 500 13 LEU A 58 -71.25 -105.56 REMARK 500 13 ASP A 63 -178.67 -50.09 REMARK 500 13 MET A 98 1.69 -69.58 REMARK 500 13 SER A 105 150.33 -41.70 REMARK 500 13 PRO A 107 88.81 -69.76 REMARK 500 13 SER A 108 153.27 -41.06 REMARK 500 13 ARG A 109 151.81 -48.96 REMARK 500 13 SER A 116 123.33 -35.02 REMARK 500 14 SER A 6 -55.70 -132.22 REMARK 500 14 ASP A 11 100.68 -41.59 REMARK 500 14 ASP A 22 174.59 -46.88 REMARK 500 14 ARG A 41 -70.74 -111.54 REMARK 500 14 LYS A 59 36.89 -85.67 REMARK 500 14 LYS A 60 -177.67 -172.97 REMARK 500 14 ASP A 63 -73.77 -79.38 REMARK 500 14 ALA A 67 -68.35 -103.18 REMARK 500 14 MET A 98 1.13 -69.70 REMARK 500 14 PRO A 107 99.52 -69.87 REMARK 500 14 SER A 108 170.37 -47.80 REMARK 500 15 ASP A 22 174.24 -48.03 REMARK 500 15 ARG A 41 -70.51 -110.88 REMARK 500 15 VAL A 61 165.81 -46.73 REMARK 500 15 ASP A 63 176.77 -48.81 REMARK 500 15 ALA A 70 34.08 71.59 REMARK 500 15 SER A 105 157.57 -44.54 REMARK 500 15 SER A 108 159.04 -48.00 REMARK 500 16 ASP A 22 172.59 -48.41 REMARK 500 16 ARG A 41 -70.15 -95.58 REMARK 500 16 LYS A 59 48.52 -92.39 REMARK 500 16 SER A 69 -178.03 -174.29 REMARK 500 16 SER A 105 154.46 -45.82 REMARK 500 16 PRO A 107 94.74 -69.78 REMARK 500 16 SER A 108 158.79 -42.14 REMARK 500 16 SER A 116 162.71 -47.68 REMARK 500 16 PRO A 118 -164.56 -69.85 REMARK 500 17 ARG A 14 84.95 -59.55 REMARK 500 17 ASP A 22 176.62 -51.63 REMARK 500 17 ARG A 41 -70.26 -103.89 REMARK 500 17 LYS A 59 -71.54 -57.98 REMARK 500 17 VAL A 61 107.90 -32.35 REMARK 500 17 ALA A 67 -69.78 -103.31 REMARK 500 17 PRO A 107 97.42 -69.74 REMARK 500 17 SER A 108 167.49 -45.75 REMARK 500 18 SER A 2 157.18 -38.39 REMARK 500 18 ASP A 22 175.52 -51.77 REMARK 500 18 ASP A 63 177.14 -52.51 REMARK 500 18 ALA A 67 -66.90 -93.78 REMARK 500 18 ALA A 70 36.13 71.49 REMARK 500 18 SER A 105 156.61 -45.20 REMARK 500 18 PRO A 107 89.26 -69.69 REMARK 500 18 SER A 108 152.28 -40.70 REMARK 500 18 ARG A 109 153.57 -44.75 REMARK 500 19 GLN A 9 144.16 -39.86 REMARK 500 19 HIS A 12 115.78 -36.19 REMARK 500 19 ARG A 14 87.36 -61.52 REMARK 500 19 ASP A 22 172.50 -52.53 REMARK 500 19 ARG A 41 -70.63 -102.17 REMARK 500 19 LEU A 58 -60.67 -94.93 REMARK 500 19 ASP A 63 -174.87 -62.43 REMARK 500 19 ALA A 67 -70.27 -102.58 REMARK 500 19 ALA A 106 141.70 -32.67 REMARK 500 19 PRO A 107 97.69 -69.85 REMARK 500 19 ARG A 109 151.89 -46.75 REMARK 500 19 PRO A 118 91.21 -69.79 REMARK 500 20 ASP A 22 176.76 -51.50 REMARK 500 20 ARG A 41 -69.98 -104.78 REMARK 500 20 LEU A 58 -61.09 -97.52 REMARK 500 20 ASP A 63 -176.19 -66.51 REMARK 500 20 SER A 69 -177.30 -174.42 REMARK 500 20 SER A 116 115.52 -37.03 REMARK 500 20 SER A 120 118.05 -165.31 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MMT008000800.1 RELATED DB: TARGETDB DBREF 1X4Z A 8 115 UNP Q6KAM5 Q6KAM5_MOUSE 591 698 SEQADV 1X4Z GLY A 1 UNP Q6KAM5 CLONING ARTIFACT SEQADV 1X4Z SER A 2 UNP Q6KAM5 CLONING ARTIFACT SEQADV 1X4Z SER A 3 UNP Q6KAM5 CLONING ARTIFACT SEQADV 1X4Z GLY A 4 UNP Q6KAM5 CLONING ARTIFACT SEQADV 1X4Z SER A 5 UNP Q6KAM5 CLONING ARTIFACT SEQADV 1X4Z SER A 6 UNP Q6KAM5 CLONING ARTIFACT SEQADV 1X4Z GLY A 7 UNP Q6KAM5 CLONING ARTIFACT SEQADV 1X4Z SER A 116 UNP Q6KAM5 CLONING ARTIFACT SEQADV 1X4Z GLY A 117 UNP Q6KAM5 CLONING ARTIFACT SEQADV 1X4Z PRO A 118 UNP Q6KAM5 CLONING ARTIFACT SEQADV 1X4Z SER A 119 UNP Q6KAM5 CLONING ARTIFACT SEQADV 1X4Z SER A 120 UNP Q6KAM5 CLONING ARTIFACT SEQADV 1X4Z GLY A 121 UNP Q6KAM5 CLONING ARTIFACT SEQRES 1 A 121 GLY SER SER GLY SER SER GLY SER GLN PRO ASP HIS GLY SEQRES 2 A 121 ARG LEU SER PRO PRO GLU ALA PRO ASP ARG PRO THR ILE SEQRES 3 A 121 SER THR ALA SER GLU THR SER VAL TYR VAL THR TRP ILE SEQRES 4 A 121 PRO ARG GLY ASN GLY GLY PHE PRO ILE GLN SER PHE ARG SEQRES 5 A 121 VAL GLU TYR LYS LYS LEU LYS LYS VAL GLY ASP TRP ILE SEQRES 6 A 121 LEU ALA THR SER ALA ILE PRO PRO SER ARG LEU SER VAL SEQRES 7 A 121 GLU ILE THR GLY LEU GLU LYS GLY ILE SER TYR LYS PHE SEQRES 8 A 121 ARG VAL ARG ALA LEU ASN MET LEU GLY GLU SER GLU PRO SEQRES 9 A 121 SER ALA PRO SER ARG PRO TYR VAL VAL SER GLY SER GLY SEQRES 10 A 121 PRO SER SER GLY SHEET 1 A 3 THR A 25 THR A 28 0 SHEET 2 A 3 SER A 33 THR A 37 -1 O THR A 37 N THR A 25 SHEET 3 A 3 SER A 77 THR A 81 -1 O VAL A 78 N VAL A 36 SHEET 1 B 4 ILE A 65 ILE A 71 0 SHEET 2 B 4 SER A 50 LYS A 57 -1 N TYR A 55 O ILE A 65 SHEET 3 B 4 SER A 88 ASN A 97 -1 O LEU A 96 N SER A 50 SHEET 4 B 4 GLY A 100 GLU A 101 -1 O GLY A 100 N ASN A 97 SHEET 1 C 4 ILE A 65 ILE A 71 0 SHEET 2 C 4 SER A 50 LYS A 57 -1 N TYR A 55 O ILE A 65 SHEET 3 C 4 SER A 88 ASN A 97 -1 O LEU A 96 N SER A 50 SHEET 4 C 4 TYR A 111 VAL A 112 -1 O TYR A 111 N TYR A 89 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL MASTER 270 0 0 0 11 0 0 6 0 0 0 10 END