HEADER OXIDOREDUCTASE 30-SEP-04 1WQL TITLE CUMENE DIOXYGENASE (CUMA1A2) FROM PSEUDOMONAS FLUORESCENS IP01 COMPND MOL_ID: 1; COMPND 2 MOLECULE: IRON-SULFUR PROTEIN LARGE SUBUNIT OF CUMENE DIOXYGENASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CUMENE DIOXYGENASE LARGE SUBUNIT; COMPND 5 EC: 1.14.12.-; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: ETHYLBENZENE DIOXYGENASE SMALL SUBUNIT; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: CUMENE DIOXYGENASE SMALL SUBUNIT; COMPND 11 EC: 1.14.12.-; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS FLUORESCENS; SOURCE 3 ORGANISM_TAXID: 294; SOURCE 4 GENE: CUMA1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PUC118; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: PSEUDOMONAS FLUORESCENS; SOURCE 12 ORGANISM_TAXID: 294; SOURCE 13 GENE: CUMA2; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 15 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PUC118 KEYWDS BIPHENYL DIOXYGENASE, CUMENE DIOXYGENASE, NAPHTHALENE DIOXYGENASE, KEYWDS 2 POLYCHLORINATED BIPHENYL DEGRADATION, RIESKE NON-HEME IRON KEYWDS 3 DIOXYGENASE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR X.DONG,S.FUSHINOBU,E.FUKUDA,T.TERADA,S.NAKAMURA,K.SHIMIZU,H.NOJIRI, AUTHOR 2 T.OMORI,H.SHOUN,T.WAKAGI REVDAT 3 13-JUL-11 1WQL 1 VERSN REVDAT 2 24-FEB-09 1WQL 1 VERSN REVDAT 1 29-MAR-05 1WQL 0 JRNL AUTH X.DONG,S.FUSHINOBU,E.FUKUDA,T.TERADA,S.NAKAMURA,K.SHIMIZU, JRNL AUTH 2 H.NOJIRI,T.OMORI,H.SHOUN,T.WAKAGI JRNL TITL CRYSTAL STRUCTURE OF THE TERMINAL OXYGENASE COMPONENT OF JRNL TITL 2 CUMENE DIOXYGENASE FROM PSEUDOMONAS FLUORESCENS IP01 JRNL REF J.BACTERIOL. V. 187 2483 2005 JRNL REFN ISSN 0021-9193 JRNL PMID 15774891 JRNL DOI 10.1128/JB.187.7.2483-2490.2005 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.65 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 3753443.730 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 53762 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.196 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2678 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.004 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.34 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.00 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 8445 REMARK 3 BIN R VALUE (WORKING SET) : 0.1830 REMARK 3 BIN FREE R VALUE : 0.2210 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.10 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 450 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.010 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4994 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 7 REMARK 3 SOLVENT ATOMS : 472 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 12.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.21 REMARK 3 ESD FROM SIGMAA (A) : 0.09 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.24 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.17 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.40 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.60 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.75 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.670 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.330 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.790 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.730 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.37 REMARK 3 BSOL : 39.70 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : FESO2.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : FESO2.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1WQL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-OCT-04. REMARK 100 THE RCSB ID CODE IS RCSB023888. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-OCT-02 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 8.1 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL40B2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9794 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 53807 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 15.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.11300 REMARK 200 FOR THE DATA SET : 17.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.29500 REMARK 200 FOR SHELL : 6.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1EG9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, TRI-LITHIUM CITRATE REMARK 280 TETRAHYDRATE, PH 8.1, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 73.51800 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 73.51800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 73.51800 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 73.51800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 73.51800 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 73.51800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 73.51800 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 73.51800 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 73.51800 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 73.51800 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 73.51800 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 73.51800 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 73.51800 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 73.51800 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 73.51800 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 73.51800 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 73.51800 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 73.51800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A HEXAMER GENERATED FROM THE REMARK 300 DIMER IN THE ASYMMETRIC UNIT BY THE OPERATIONS: Z, X, Y AND Y, Z, X. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 32760 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 56450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -200.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 3 1.000000 0.000000 0.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 278 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 SER A 3 REMARK 465 ILE A 4 REMARK 465 ILE A 5 REMARK 465 ASN A 6 REMARK 465 LYS A 7 REMARK 465 GLU A 8 REMARK 465 VAL A 9 REMARK 465 GLN A 10 REMARK 465 GLU A 11 REMARK 465 ALA A 12 REMARK 465 PRO A 13 REMARK 465 LEU A 14 REMARK 465 LYS A 15 REMARK 465 TRP A 16 REMARK 465 VAL A 17 REMARK 465 LYS A 18 REMARK 465 LYS A 147 REMARK 465 LYS A 148 REMARK 465 GLU A 149 REMARK 465 GLY A 150 REMARK 465 ASP A 151 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 SER B 3 REMARK 465 ALA B 4 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 788 O HOH A 788 9555 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 77 -156.86 -145.34 REMARK 500 ARG A 92 -5.69 79.39 REMARK 500 SER A 189 -137.35 51.39 REMARK 500 VAL A 205 -172.43 77.86 REMARK 500 ASP A 231 69.68 -105.64 REMARK 500 THR A 237 -101.06 -111.65 REMARK 500 SER A 262 118.20 154.53 REMARK 500 ASP A 280 -38.71 62.24 REMARK 500 ARG A 345 59.05 -143.47 REMARK 500 THR A 377 -64.77 -106.10 REMARK 500 LEU A 399 0.41 -68.18 REMARK 500 ASP B 81 80.69 -157.49 REMARK 500 LEU B 139 -127.45 56.13 REMARK 500 ASP B 159 -167.67 -119.65 REMARK 500 SER B 175 -77.81 -105.89 REMARK 500 ASN B 181 -177.11 -172.15 REMARK 500 LEU B 182 52.30 -118.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES A 501 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 124 ND1 REMARK 620 2 FES A 501 S1 115.6 REMARK 620 3 FES A 501 S2 117.7 106.5 REMARK 620 4 HIS A 103 ND1 87.3 113.8 115.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES A 501 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 101 SG REMARK 620 2 FES A 501 S1 107.0 REMARK 620 3 FES A 501 S2 109.8 105.2 REMARK 620 4 CYS A 121 SG 111.4 112.1 111.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE2 A 502 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 234 NE2 REMARK 620 2 HIS A 240 NE2 103.7 REMARK 620 3 ASP A 388 OD2 101.6 100.2 REMARK 620 4 OXY A 503 O2 84.6 148.0 108.4 REMARK 620 5 OXY A 503 O1 101.2 116.1 130.4 32.3 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE2 A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FES A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OXY A 503 DBREF 1WQL A 1 459 UNP Q51743 Q51743_PSEFL 1 459 DBREF 1WQL B 1 186 UNP Q51744 Q51744_PSEFL 1 186 SEQRES 1 A 459 MET SER SER ILE ILE ASN LYS GLU VAL GLN GLU ALA PRO SEQRES 2 A 459 LEU LYS TRP VAL LYS ASN TRP SER ASP GLU GLU ILE LYS SEQRES 3 A 459 ALA LEU VAL ASP GLU GLU LYS GLY LEU LEU ASP PRO ARG SEQRES 4 A 459 ILE PHE SER ASP GLN ASP LEU TYR GLU ILE GLU LEU GLU SEQRES 5 A 459 ARG VAL PHE ALA ARG SER TRP LEU LEU LEU GLY HIS GLU SEQRES 6 A 459 GLY HIS ILE PRO LYS ALA GLY ASP TYR LEU THR THR TYR SEQRES 7 A 459 MET GLY GLU ASP PRO VAL ILE VAL VAL ARG GLN LYS ASP SEQRES 8 A 459 ARG SER ILE LYS VAL PHE LEU ASN GLN CYS ARG HIS ARG SEQRES 9 A 459 GLY MET ARG ILE GLU ARG SER ASP PHE GLY ASN ALA LYS SEQRES 10 A 459 SER PHE THR CYS THR TYR HIS GLY TRP ALA TYR ASP THR SEQRES 11 A 459 ALA GLY ASN LEU VAL ASN VAL PRO TYR GLU LYS GLU ALA SEQRES 12 A 459 PHE CYS ASP LYS LYS GLU GLY ASP CYS GLY PHE ASP LYS SEQRES 13 A 459 ALA ASP TRP GLY PRO LEU GLN ALA ARG VAL ASP THR TYR SEQRES 14 A 459 LYS GLY LEU ILE PHE ALA ASN TRP ASP THR GLU ALA PRO SEQRES 15 A 459 ASP LEU LYS THR TYR LEU SER ASP ALA THR PRO TYR MET SEQRES 16 A 459 ASP VAL MET LEU ASP ARG THR GLU ALA VAL THR GLN VAL SEQRES 17 A 459 ILE THR GLY MET GLN LYS THR VAL ILE PRO CYS ASN TRP SEQRES 18 A 459 LYS PHE ALA ALA GLU GLN PHE CYS SER ASP MET TYR HIS SEQRES 19 A 459 ALA GLY THR MET ALA HIS LEU SER GLY VAL LEU SER SER SEQRES 20 A 459 LEU PRO PRO GLU MET ASP LEU SER GLN VAL LYS LEU PRO SEQRES 21 A 459 SER SER GLY ASN GLN PHE ARG ALA LYS TRP GLY GLY HIS SEQRES 22 A 459 GLY THR GLY TRP PHE ASN ASP ASP PHE ALA LEU LEU GLN SEQRES 23 A 459 ALA ILE MET GLY PRO LYS VAL VAL ASP TYR TRP THR LYS SEQRES 24 A 459 GLY PRO ALA ALA GLU ARG ALA LYS GLU ARG LEU GLY LYS SEQRES 25 A 459 VAL LEU PRO ALA ASP ARG MET VAL ALA GLN HIS MET THR SEQRES 26 A 459 ILE PHE PRO THR CYS SER PHE LEU PRO GLY ILE ASN THR SEQRES 27 A 459 VAL ARG THR TRP HIS PRO ARG GLY PRO ASN GLU ILE GLU SEQRES 28 A 459 VAL TRP SER PHE ILE VAL VAL ASP ALA ASP ALA PRO GLU SEQRES 29 A 459 ASP ILE LYS GLU GLU TYR ARG ARG LYS ASN ILE PHE THR SEQRES 30 A 459 PHE ASN GLN GLY GLY THR TYR GLU GLN ASP ASP GLY GLU SEQRES 31 A 459 ASN TRP VAL GLU VAL GLN ARG GLY LEU ARG GLY TYR LYS SEQRES 32 A 459 ALA ARG SER ARG PRO LEU CYS ALA GLN MET GLY ALA GLY SEQRES 33 A 459 VAL PRO ASN LYS ASN ASN PRO GLU PHE PRO GLY LYS THR SEQRES 34 A 459 SER TYR VAL TYR SER GLU GLU ALA ALA ARG GLY PHE TYR SEQRES 35 A 459 HIS HIS TRP SER ARG MET MET SER GLU PRO SER TRP ASP SEQRES 36 A 459 THR LEU LYS SER SEQRES 1 B 186 MET THR SER ALA ASP LEU THR LYS PRO ILE GLU TRP PRO SEQRES 2 B 186 GLU MET PRO VAL SER LEU GLU LEU GLN ASN ALA VAL GLU SEQRES 3 B 186 GLN PHE TYR TYR ARG GLU ALA GLN LEU LEU ASP TYR GLN SEQRES 4 B 186 ASN TYR GLU ALA TRP LEU ALA LEU LEU THR GLN ASP ILE SEQRES 5 B 186 GLN TYR TRP MET PRO ILE ARG THR THR HIS THR SER ARG SEQRES 6 B 186 ASN LYS ALA MET GLU TYR VAL PRO PRO GLY GLY ASN ALA SEQRES 7 B 186 HIS PHE ASP GLU THR TYR GLU SER MET ARG ALA ARG ILE SEQRES 8 B 186 ARG ALA ARG VAL SER GLY LEU ASN TRP THR GLU ASP PRO SEQRES 9 B 186 PRO SER ARG SER ARG HIS ILE VAL SER ASN VAL ILE VAL SEQRES 10 B 186 ARG GLU THR GLU SER ALA GLY THR LEU GLU VAL SER SER SEQRES 11 B 186 ALA PHE LEU CYS TYR ARG ASN ARG LEU GLU ARG MET THR SEQRES 12 B 186 ASP ILE TYR VAL GLY GLU ARG ARG ASP ILE LEU LEU ARG SEQRES 13 B 186 VAL SER ASP GLY LEU GLY PHE LYS ILE ALA LYS ARG THR SEQRES 14 B 186 ILE LEU LEU ASP GLN SER THR ILE THR ALA ASN ASN LEU SEQRES 15 B 186 SER GLN PHE PHE HET FE2 A 502 1 HET FES A 501 4 HET OXY A 503 2 HETNAM FE2 FE (II) ION HETNAM FES FE2/S2 (INORGANIC) CLUSTER HETNAM OXY OXYGEN MOLECULE FORMUL 3 FE2 FE 2+ FORMUL 4 FES FE2 S2 FORMUL 5 OXY O2 FORMUL 6 HOH *472(H2 O) HELIX 1 1 SER A 21 ALA A 27 1 7 HELIX 2 2 PRO A 38 SER A 42 5 5 HELIX 3 3 ASP A 43 VAL A 54 1 12 HELIX 4 4 PHE A 55 SER A 58 5 4 HELIX 5 5 GLY A 66 ILE A 68 5 3 HELIX 6 6 TYR A 139 PHE A 144 1 6 HELIX 7 7 ASP A 155 TRP A 159 5 5 HELIX 8 8 ASP A 183 LEU A 188 1 6 HELIX 9 9 ALA A 191 ASP A 200 1 10 HELIX 10 10 ASN A 220 ASP A 231 1 12 HELIX 11 11 MET A 232 THR A 237 1 6 HELIX 12 12 HIS A 240 LEU A 248 1 9 HELIX 13 13 ASP A 253 VAL A 257 5 5 HELIX 14 14 PHE A 282 LYS A 299 1 18 HELIX 15 15 GLY A 300 GLY A 311 1 12 HELIX 16 16 PRO A 315 ASP A 317 5 3 HELIX 17 17 PRO A 363 PHE A 378 1 16 HELIX 18 18 TYR A 384 LEU A 399 1 16 HELIX 19 19 ARG A 400 GLY A 401 5 2 HELIX 20 20 TYR A 402 SER A 406 5 5 HELIX 21 21 GLU A 435 GLU A 451 1 17 HELIX 22 22 SER A 453 LYS A 458 1 6 HELIX 23 23 SER B 18 TYR B 38 1 21 HELIX 24 24 ASN B 40 ALA B 46 1 7 HELIX 25 25 THR B 63 GLU B 70 5 8 HELIX 26 26 THR B 83 VAL B 95 1 13 HELIX 27 27 ASN B 99 ASP B 103 5 5 SHEET 1 A 3 VAL A 29 ASP A 30 0 SHEET 2 A 3 LEU A 35 LEU A 36 -1 O LEU A 35 N ASP A 30 SHEET 3 A 3 LEU A 409 CYS A 410 -1 O LEU A 409 N LEU A 36 SHEET 1 B 7 LEU A 60 HIS A 64 0 SHEET 2 B 7 LEU A 172 ASN A 176 -1 O ALA A 175 N LEU A 60 SHEET 3 B 7 GLN A 163 TYR A 169 -1 N ASP A 167 O PHE A 174 SHEET 4 B 7 ILE A 94 LEU A 98 -1 N VAL A 96 O ALA A 164 SHEET 5 B 7 ASP A 82 ARG A 88 -1 N ILE A 85 O PHE A 97 SHEET 6 B 7 ASP A 73 MET A 79 -1 N THR A 77 O VAL A 84 SHEET 7 B 7 PHE A 113 ASN A 115 -1 O GLY A 114 N TYR A 74 SHEET 1 C 3 PHE A 119 THR A 120 0 SHEET 2 C 3 ALA A 127 TYR A 128 -1 O TYR A 128 N PHE A 119 SHEET 3 C 3 LEU A 134 ASN A 136 -1 O ASN A 136 N ALA A 127 SHEET 1 D 3 THR A 206 VAL A 208 0 SHEET 2 D 3 ILE A 350 ASP A 359 -1 O VAL A 358 N GLN A 207 SHEET 3 D 3 GLN A 213 ILE A 217 -1 N THR A 215 O VAL A 352 SHEET 1 E 8 THR A 206 VAL A 208 0 SHEET 2 E 8 ILE A 350 ASP A 359 -1 O VAL A 358 N GLN A 207 SHEET 3 E 8 THR A 338 PRO A 344 -1 N VAL A 339 O PHE A 355 SHEET 4 E 8 CYS A 330 PHE A 332 -1 N SER A 331 O ARG A 340 SHEET 5 E 8 MET A 319 ILE A 326 -1 N ILE A 326 O CYS A 330 SHEET 6 E 8 GLY A 274 ASN A 279 -1 N PHE A 278 O VAL A 320 SHEET 7 E 8 GLY A 263 ARG A 267 -1 N PHE A 266 O THR A 275 SHEET 8 E 8 LYS A 428 TYR A 431 -1 O LYS A 428 N ARG A 267 SHEET 1 F 6 ALA B 78 GLU B 82 0 SHEET 2 F 6 TYR B 54 PRO B 57 -1 N TYR B 54 O GLU B 82 SHEET 3 F 6 PHE B 163 LEU B 172 1 O ILE B 170 N TRP B 55 SHEET 4 F 6 MET B 142 ARG B 156 -1 N GLU B 149 O LEU B 171 SHEET 5 F 6 THR B 125 ARG B 138 -1 N CYS B 134 O TYR B 146 SHEET 6 F 6 ARG B 107 GLU B 119 -1 N ARG B 107 O ASN B 137 SSBOND 1 CYS A 145 CYS A 152 1555 1555 2.03 LINK FE1 FES A 501 ND1 HIS A 124 1555 1555 2.18 LINK FE1 FES A 501 ND1 HIS A 103 1555 1555 2.21 LINK FE2 FES A 501 SG CYS A 101 1555 1555 2.44 LINK FE2 FES A 501 SG CYS A 121 1555 1555 2.30 LINK FE FE2 A 502 NE2 HIS A 234 1555 1555 2.15 LINK FE FE2 A 502 NE2 HIS A 240 1555 1555 1.99 LINK FE FE2 A 502 OD2 ASP A 388 1555 1555 1.96 LINK FE FE2 A 502 O2 OXY A 503 1555 1555 2.70 LINK FE FE2 A 502 O1 OXY A 503 1555 1555 2.07 CISPEP 1 PHE A 327 PRO A 328 0 -0.26 CISPEP 2 ASP B 103 PRO B 104 0 0.43 SITE 1 AC1 5 GLN A 227 HIS A 234 HIS A 240 ASP A 388 SITE 2 AC1 5 OXY A 503 SITE 1 AC2 7 CYS A 101 HIS A 103 ARG A 104 CYS A 121 SITE 2 AC2 7 TYR A 123 HIS A 124 TRP A 126 SITE 1 AC3 6 GLN A 227 HIS A 234 HIS A 240 PHE A 378 SITE 2 AC3 6 ASP A 388 FE2 A 502 CRYST1 147.036 147.036 147.036 90.00 90.00 90.00 P 21 3 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006801 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006801 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006801 0.00000 MASTER 402 0 3 27 30 0 6 6 0 0 0 51 END