HEADER LYASE 22-SEP-04 1WQ5 TITLE CRYSTAL STRUCTURE OF TRYPTOPHAN SYNTHASE ALPHA-SUBUNIT FROM TITLE 2 ESCHERICHIA COLI COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRYPTOPHAN SYNTHASE ALPHA CHAIN; COMPND 3 CHAIN: A, B; COMPND 4 EC: 4.2.1.20; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PUC8PTRPA(WILD)-TRPA KEYWDS TRYPTOPHAN SYNTHASE, TRYPTOPHAN, RIKEN STRUCTURAL GENOMICS/PROTEOMICS KEYWDS 2 INITIATIVE, RSGI, STRUCTURAL GENOMICS, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR K.NISHIO,Y.MORIMOTO,M.ISHIZUKA,K.OGASAHARA,K.YUTANI,T.TSUKIHARA,RIKEN AUTHOR 2 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 3 13-JUL-11 1WQ5 1 VERSN REVDAT 2 24-FEB-09 1WQ5 1 VERSN REVDAT 1 15-FEB-05 1WQ5 0 JRNL AUTH K.NISHIO,Y.MORIMOTO,M.ISHIZUKA,K.OGASAHARA,T.TSUKIHARA, JRNL AUTH 2 K.YUTANI JRNL TITL CONFORMATIONAL CHANGES IN THE ALPHA-SUBUNIT COUPLED TO JRNL TITL 2 BINDING OF THE BETA(2)-SUBUNIT OF TRYPTOPHAN SYNTHASE FROM JRNL TITL 3 ESCHERICHIA COLI: CRYSTAL STRUCTURE OF THE TRYPTOPHAN JRNL TITL 4 SYNTHASE ALPHA-SUBUNIT ALON JRNL REF BIOCHEMISTRY V. 44 1184 2005 JRNL REFN ISSN 0006-2960 JRNL PMID 15667212 JRNL DOI 10.1021/BI047927M REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.86 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1819184.650 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 97.8 REMARK 3 NUMBER OF REFLECTIONS : 21699 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1112 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.007 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.44 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 90.10 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3150 REMARK 3 BIN R VALUE (WORKING SET) : 0.2420 REMARK 3 BIN FREE R VALUE : 0.3310 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 167 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.026 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3943 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 113 REMARK 3 SOLVENT ATOMS : 197 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 11.23000 REMARK 3 B22 (A**2) : -2.96000 REMARK 3 B33 (A**2) : -8.27000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -3.77000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.24 REMARK 3 ESD FROM SIGMAA (A) : 0.24 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.34 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.33 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.40 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 21.90 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.92 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.36 REMARK 3 BSOL : 48.96 REMARK 3 REMARK 3 NCS MODEL : CONSTR REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : DNA-RNA_REP.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : LIGAND.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : DNA-RNA.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : ION.TOP REMARK 3 TOPOLOGY FILE 5 : LIGAND.TOP REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1WQ5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-SEP-04. REMARK 100 THE RCSB ID CODE IS RCSB023872. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-FEB-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL44XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9 REMARK 200 MONOCHROMATOR : MIRROR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : BRUKER DIP-6040 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21699 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 49.860 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 7.900 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: 1BKS_A REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE, SODIUM CACODYLATE, REMARK 280 PH 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 288K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 78.38700 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 22.31300 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 78.38700 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 22.31300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 18910 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 42450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -439.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 164.84273 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -71.26065 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A 57 REMARK 465 LEU A 58 REMARK 465 ALA A 59 REMARK 465 ASP A 60 REMARK 465 GLY A 61 REMARK 465 PRO A 62 REMARK 465 THR A 63 REMARK 465 ILE A 64 REMARK 465 GLY A 184 REMARK 465 ALA A 185 REMARK 465 ALA B 1059 REMARK 465 ASP B 1060 REMARK 465 GLY B 1061 REMARK 465 PRO B 1062 REMARK 465 THR B 1063 REMARK 465 GLY B 1184 REMARK 465 ALA B 1185 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 2 70.68 -162.95 REMARK 500 SER A 55 28.00 -169.75 REMARK 500 ASN A 66 110.75 -170.72 REMARK 500 THR A 68 -76.74 -149.74 REMARK 500 ALA A 74 143.52 -33.36 REMARK 500 PHE A 212 110.15 95.24 REMARK 500 GLU A 247 77.79 -118.45 REMARK 500 GLN B1065 47.11 74.33 REMARK 500 THR B1068 -60.25 -133.51 REMARK 500 GLU B1135 22.59 -154.23 REMARK 500 PHE B1212 112.50 93.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2155 DISTANCE = 5.01 ANGSTROMS REMARK 525 HOH A2183 DISTANCE = 5.33 ANGSTROMS REMARK 525 HOH B2080 DISTANCE = 5.09 ANGSTROMS REMARK 525 HOH B2114 DISTANCE = 6.05 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 508 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 509 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 510 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 511 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 512 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 513 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 606 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 607 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 608 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1V7Y RELATED DB: PDB REMARK 900 ROOM-TEMPERATURE CRYSTAL STRUCTURE REMARK 900 RELATED ID: MY_001000019.1 RELATED DB: TARGETDB DBREF 1WQ5 A 1 268 UNP P0A877 TRPA_ECOLI 1 268 DBREF 1WQ5 B 1001 1268 UNP P0A877 TRPA_ECOLI 1 268 SEQRES 1 A 268 MET GLU ARG TYR GLU SER LEU PHE ALA GLN LEU LYS GLU SEQRES 2 A 268 ARG LYS GLU GLY ALA PHE VAL PRO PHE VAL THR LEU GLY SEQRES 3 A 268 ASP PRO GLY ILE GLU GLN SER LEU LYS ILE ILE ASP THR SEQRES 4 A 268 LEU ILE GLU ALA GLY ALA ASP ALA LEU GLU LEU GLY ILE SEQRES 5 A 268 PRO PHE SER ASP PRO LEU ALA ASP GLY PRO THR ILE GLN SEQRES 6 A 268 ASN ALA THR LEU ARG ALA PHE ALA ALA GLY VAL THR PRO SEQRES 7 A 268 ALA GLN CYS PHE GLU MET LEU ALA LEU ILE ARG GLN LYS SEQRES 8 A 268 HIS PRO THR ILE PRO ILE GLY LEU LEU MET TYR ALA ASN SEQRES 9 A 268 LEU VAL PHE ASN LYS GLY ILE ASP GLU PHE TYR ALA GLN SEQRES 10 A 268 CYS GLU LYS VAL GLY VAL ASP SER VAL LEU VAL ALA ASP SEQRES 11 A 268 VAL PRO VAL GLU GLU SER ALA PRO PHE ARG GLN ALA ALA SEQRES 12 A 268 LEU ARG HIS ASN VAL ALA PRO ILE PHE ILE CYS PRO PRO SEQRES 13 A 268 ASN ALA ASP ASP ASP LEU LEU ARG GLN ILE ALA SER TYR SEQRES 14 A 268 GLY ARG GLY TYR THR TYR LEU LEU SER ARG ALA GLY VAL SEQRES 15 A 268 THR GLY ALA GLU ASN ARG ALA ALA LEU PRO LEU ASN HIS SEQRES 16 A 268 LEU VAL ALA LYS LEU LYS GLU TYR ASN ALA ALA PRO PRO SEQRES 17 A 268 LEU GLN GLY PHE GLY ILE SER ALA PRO ASP GLN VAL LYS SEQRES 18 A 268 ALA ALA ILE ASP ALA GLY ALA ALA GLY ALA ILE SER GLY SEQRES 19 A 268 SER ALA ILE VAL LYS ILE ILE GLU GLN HIS ILE ASN GLU SEQRES 20 A 268 PRO GLU LYS MET LEU ALA ALA LEU LYS VAL PHE VAL GLN SEQRES 21 A 268 PRO MET LYS ALA ALA THR ARG SER SEQRES 1 B 268 MET GLU ARG TYR GLU SER LEU PHE ALA GLN LEU LYS GLU SEQRES 2 B 268 ARG LYS GLU GLY ALA PHE VAL PRO PHE VAL THR LEU GLY SEQRES 3 B 268 ASP PRO GLY ILE GLU GLN SER LEU LYS ILE ILE ASP THR SEQRES 4 B 268 LEU ILE GLU ALA GLY ALA ASP ALA LEU GLU LEU GLY ILE SEQRES 5 B 268 PRO PHE SER ASP PRO LEU ALA ASP GLY PRO THR ILE GLN SEQRES 6 B 268 ASN ALA THR LEU ARG ALA PHE ALA ALA GLY VAL THR PRO SEQRES 7 B 268 ALA GLN CYS PHE GLU MET LEU ALA LEU ILE ARG GLN LYS SEQRES 8 B 268 HIS PRO THR ILE PRO ILE GLY LEU LEU MET TYR ALA ASN SEQRES 9 B 268 LEU VAL PHE ASN LYS GLY ILE ASP GLU PHE TYR ALA GLN SEQRES 10 B 268 CYS GLU LYS VAL GLY VAL ASP SER VAL LEU VAL ALA ASP SEQRES 11 B 268 VAL PRO VAL GLU GLU SER ALA PRO PHE ARG GLN ALA ALA SEQRES 12 B 268 LEU ARG HIS ASN VAL ALA PRO ILE PHE ILE CYS PRO PRO SEQRES 13 B 268 ASN ALA ASP ASP ASP LEU LEU ARG GLN ILE ALA SER TYR SEQRES 14 B 268 GLY ARG GLY TYR THR TYR LEU LEU SER ARG ALA GLY VAL SEQRES 15 B 268 THR GLY ALA GLU ASN ARG ALA ALA LEU PRO LEU ASN HIS SEQRES 16 B 268 LEU VAL ALA LYS LEU LYS GLU TYR ASN ALA ALA PRO PRO SEQRES 17 B 268 LEU GLN GLY PHE GLY ILE SER ALA PRO ASP GLN VAL LYS SEQRES 18 B 268 ALA ALA ILE ASP ALA GLY ALA ALA GLY ALA ILE SER GLY SEQRES 19 B 268 SER ALA ILE VAL LYS ILE ILE GLU GLN HIS ILE ASN GLU SEQRES 20 B 268 PRO GLU LYS MET LEU ALA ALA LEU LYS VAL PHE VAL GLN SEQRES 21 B 268 PRO MET LYS ALA ALA THR ARG SER HET SO4 B 501 5 HET SO4 A 502 5 HET SO4 B 503 5 HET SO4 A 504 5 HET SO4 B 505 5 HET SO4 B 506 5 HET SO4 B 507 5 HET SO4 A 508 5 HET SO4 B 509 5 HET SO4 A 510 5 HET SO4 A 511 5 HET SO4 A 512 5 HET SO4 A 513 5 HET GOL A 601 6 HET GOL A 602 6 HET GOL A 603 6 HET GOL B 604 6 HET GOL A 605 6 HET GOL B 606 6 HET GOL A 607 6 HET GOL A 608 6 HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 SO4 13(O4 S 2-) FORMUL 16 GOL 8(C3 H8 O3) FORMUL 24 HOH *197(H2 O) HELIX 1 1 GLU A 2 ARG A 14 1 13 HELIX 2 2 GLY A 29 ALA A 43 1 15 HELIX 3 3 LEU A 69 ALA A 74 1 6 HELIX 4 4 THR A 77 HIS A 92 1 16 HELIX 5 5 TYR A 102 GLY A 110 1 9 HELIX 6 6 GLY A 110 VAL A 121 1 12 HELIX 7 7 PRO A 132 GLU A 135 5 4 HELIX 8 8 SER A 136 HIS A 146 1 11 HELIX 9 9 ASP A 159 GLY A 170 1 12 HELIX 10 10 ARG A 179 VAL A 182 5 4 HELIX 11 11 PRO A 192 TYR A 203 1 12 HELIX 12 12 ALA A 216 ALA A 226 1 11 HELIX 13 13 GLY A 234 HIS A 244 1 11 HELIX 14 14 GLU A 247 ALA A 265 1 19 HELIX 15 15 GLU B 1002 LYS B 1015 1 14 HELIX 16 16 GLY B 1029 GLY B 1044 1 16 HELIX 17 17 LEU B 1069 ALA B 1073 5 5 HELIX 18 18 THR B 1077 HIS B 1092 1 16 HELIX 19 19 TYR B 1102 GLY B 1110 1 9 HELIX 20 20 GLY B 1110 GLY B 1122 1 13 HELIX 21 21 PRO B 1132 GLU B 1135 5 4 HELIX 22 22 SER B 1136 HIS B 1146 1 11 HELIX 23 23 ASP B 1159 GLY B 1170 1 12 HELIX 24 24 ARG B 1179 VAL B 1182 5 4 HELIX 25 25 PRO B 1192 TYR B 1203 1 12 HELIX 26 26 ALA B 1216 ALA B 1226 1 11 HELIX 27 27 GLY B 1234 HIS B 1244 1 11 HELIX 28 28 GLU B 1247 ALA B 1265 1 19 SHEET 1 A 9 ALA A 149 PRO A 150 0 SHEET 2 A 9 SER A 125 VAL A 128 1 N VAL A 126 O ALA A 149 SHEET 3 A 9 ILE A 97 MET A 101 1 N LEU A 99 O SER A 125 SHEET 4 A 9 LEU A 48 GLY A 51 1 N LEU A 50 O GLY A 98 SHEET 5 A 9 ALA A 18 THR A 24 1 N VAL A 23 O GLY A 51 SHEET 6 A 9 GLY A 230 SER A 233 1 O ALA A 231 N VAL A 20 SHEET 7 A 9 PRO A 208 GLY A 211 1 N GLN A 210 O GLY A 230 SHEET 8 A 9 THR A 174 LEU A 177 1 N LEU A 176 O LEU A 209 SHEET 9 A 9 ILE A 153 CYS A 154 1 N CYS A 154 O TYR A 175 SHEET 1 B 9 ALA B1149 PRO B1150 0 SHEET 2 B 9 SER B1125 VAL B1128 1 N VAL B1126 O ALA B1149 SHEET 3 B 9 ILE B1097 MET B1101 1 N MET B1101 O LEU B1127 SHEET 4 B 9 LEU B1048 GLY B1051 1 N LEU B1050 O GLY B1098 SHEET 5 B 9 ALA B1018 THR B1024 1 N VAL B1023 O GLY B1051 SHEET 6 B 9 GLY B1230 SER B1233 1 O ALA B1231 N VAL B1020 SHEET 7 B 9 PRO B1208 GLY B1211 1 N GLN B1210 O ILE B1232 SHEET 8 B 9 THR B1174 LEU B1177 1 N LEU B1176 O GLY B1211 SHEET 9 B 9 ILE B1153 CYS B1154 1 N CYS B1154 O TYR B1175 CISPEP 1 ASP A 27 PRO A 28 0 -0.18 CISPEP 2 ASP B 1027 PRO B 1028 0 0.10 SITE 1 AC1 9 LEU A 69 ARG A 70 ALA A 71 PHE B1212 SITE 2 AC1 9 GLY B1213 SER B1233 GLY B1234 SER B1235 SITE 3 AC1 9 HOH B2003 SITE 1 AC2 10 PHE A 212 GLY A 213 SER A 233 GLY A 234 SITE 2 AC2 10 SER A 235 HOH A2002 HOH A2070 LEU B1069 SITE 3 AC2 10 ARG B1070 ALA B1071 SITE 1 AC3 6 ARG B1179 LEU B1193 GLN B1210 HOH B2024 SITE 2 AC3 6 HOH B2074 HOH B2089 SITE 1 AC4 4 ARG A 179 LEU A 193 GLN A 210 HOH A2104 SITE 1 AC5 5 ARG A 171 GLY B1110 ILE B1111 ASP B1112 SITE 2 AC5 5 HOH B2054 SITE 1 AC6 5 GOL B 606 LYS B1120 ASP B1159 ASP B1160 SITE 2 AC6 5 ARG B1188 SITE 1 AC7 3 ILE B1030 GLU B1031 HOH B2009 SITE 1 AC8 4 GLU A 247 PRO A 248 GLU A 249 LYS A 250 SITE 1 AC9 5 LYS A 35 GLU B1247 PRO B1248 GLU B1249 SITE 2 AC9 5 LYS B1250 SITE 1 BC1 6 ASN A 157 ALA A 158 ASP A 159 LEU A 162 SITE 2 BC1 6 ARG A 188 HOH A2139 SITE 1 BC2 2 ARG A 70 SER B1215 SITE 1 BC3 4 GLY A 29 ILE A 30 GLU A 31 HOH A2046 SITE 1 BC4 2 LYS A 120 ASP A 160 SITE 1 BC5 3 LYS A 120 HIS A 195 LYS A 199 SITE 1 BC6 10 ARG A 140 LEU A 144 PRO A 150 SER A 168 SITE 2 BC6 10 TYR A 169 ARG A 171 PHE B1107 ASN B1108 SITE 3 BC6 10 LYS B1109 HOH B2099 SITE 1 BC7 10 TYR A 115 VAL A 126 LEU A 127 VAL A 128 SITE 2 BC7 10 VAL A 131 SER A 136 PHE A 139 PRO A 150 SITE 3 BC7 10 ILE A 151 PHE A 152 SITE 1 BC8 9 TYR B1115 VAL B1126 LEU B1127 VAL B1128 SITE 2 BC8 9 SER B1136 PHE B1139 PRO B1150 ILE B1151 SITE 3 BC8 9 PHE B1152 SITE 1 BC9 6 ALA A 86 ARG A 89 GLN A 90 LYS A 120 SITE 2 BC9 6 VAL A 121 HIS A 195 SITE 1 CC1 4 SO4 B 506 LYS B1120 ASP B1160 LYS B1199 SITE 1 CC2 5 GLU A 2 ARG A 171 GLY A 172 ALA A 206 SITE 2 CC2 5 HOH A2120 SITE 1 CC3 6 SER A 55 PHE A 72 HOH A2110 THR B1024 SITE 2 CC3 6 GLY B1051 ILE B1052 CRYST1 156.774 44.626 71.716 90.00 96.46 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006379 0.000000 0.000723 0.00000 SCALE2 0.000000 0.022408 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014033 0.00000 MASTER 401 0 21 28 18 0 39 6 0 0 0 42 END