HEADER CHAPERONE 09-AUG-04 1U97 TITLE SOLUTION STRUCTURE OF APO YEAST COX17 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOCHROME C OXIDASE COPPER CHAPERONE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: COX17; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA(DE3)PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-3A KEYWDS METALLOCHAPERONE, UNSTRUCTURED N-TERMINUS, TWO ALPHA- KEYWDS 2 HELICES, CYTOCHROME C OXIDASE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR C.ABAJIAN,L.A.YATSUNYK,B.E.RAMIREZ,A.C.ROSENZWEIG REVDAT 3 24-FEB-09 1U97 1 VERSN REVDAT 2 05-APR-05 1U97 1 JRNL REVDAT 1 05-OCT-04 1U97 0 JRNL AUTH C.ABAJIAN,L.A.YATSUNYK,B.E.RAMIREZ,A.C.ROSENZWEIG JRNL TITL YEAST COX17 SOLUTION STRUCTURE AND COPPER(I) JRNL TITL 2 BINDING. JRNL REF J.BIOL.CHEM. V. 279 53584 2004 JRNL REFN ISSN 0021-9258 JRNL PMID 15465825 JRNL DOI 10.1074/JBC.M408099200 REMARK 1 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : ARIA 1.2 REMARK 3 AUTHORS : LINGE AND NILGES REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1U97 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-AUG-04. REMARK 100 THE RCSB ID CODE IS RCSB023403. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : 0 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1MM COX17 U-15N,13C; 20MM REMARK 210 POTASSIUM PHOSPHATE, PH 6.0 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-EDITED_NOESY, 3D_13C- REMARK 210 EDITED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CNS 1.1, ARIA 1.2, FELIX REMARK 210 2000, VNMR 6.1B REMARK 210 METHOD USED : RESTRAINED MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 80 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : LOWEST RETRAINT ENERGIES, REMARK 210 RESTRAINT VIOLATIONS, AND RMS REMARK 210 DEVIATIONS FROM IDEAL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NMR SAMPLES WERE REDUCED AND KEPT ANAEROBIC REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLN A 10 103.59 63.35 REMARK 500 1 ALA A 14 103.14 60.69 REMARK 500 1 CYS A 16 -1.43 -145.00 REMARK 500 1 CYS A 23 147.33 65.44 REMARK 500 1 CYS A 24 -99.01 61.46 REMARK 500 1 VAL A 25 -155.72 39.43 REMARK 500 1 CYS A 26 19.60 -162.63 REMARK 500 1 PHE A 39 -73.06 -70.03 REMARK 500 1 ASN A 40 19.26 -150.48 REMARK 500 1 GLN A 42 -80.45 63.95 REMARK 500 1 VAL A 65 129.04 62.51 REMARK 500 2 ASP A 5 151.20 63.92 REMARK 500 2 GLU A 9 -83.53 61.19 REMARK 500 2 CYS A 16 -179.47 -67.14 REMARK 500 2 GLU A 17 94.73 57.48 REMARK 500 2 PRO A 20 -171.04 -63.62 REMARK 500 2 CYS A 24 -82.76 -132.08 REMARK 500 2 VAL A 25 156.16 63.00 REMARK 500 2 GLU A 45 -23.31 -144.64 REMARK 500 2 TYR A 61 41.18 -102.21 REMARK 500 2 ALA A 68 135.24 64.89 REMARK 500 3 THR A 4 96.11 58.54 REMARK 500 3 LYS A 7 -175.17 -69.99 REMARK 500 3 GLN A 8 99.82 59.69 REMARK 500 3 GLU A 11 144.43 65.11 REMARK 500 3 HIS A 13 103.54 60.56 REMARK 500 3 CYS A 16 10.04 -149.59 REMARK 500 3 ASP A 18 102.27 60.23 REMARK 500 3 CYS A 23 -40.02 -147.79 REMARK 500 3 VAL A 25 -6.48 68.15 REMARK 500 3 CYS A 26 86.58 54.78 REMARK 500 3 ASP A 43 -72.23 68.58 REMARK 500 3 SER A 44 95.36 58.09 REMARK 500 3 CYS A 47 77.66 -119.61 REMARK 500 3 GLU A 64 177.09 -57.56 REMARK 500 3 SER A 67 -64.04 -102.43 REMARK 500 3 ALA A 68 -77.87 -102.45 REMARK 500 4 GLN A 8 100.51 60.95 REMARK 500 4 GLN A 10 -20.61 -163.17 REMARK 500 4 GLU A 15 -176.11 59.46 REMARK 500 4 LYS A 21 80.72 65.30 REMARK 500 4 VAL A 25 -164.48 42.34 REMARK 500 4 ASP A 43 98.04 58.76 REMARK 500 4 TYR A 61 -63.47 -93.64 REMARK 500 4 GLU A 64 -94.96 40.65 REMARK 500 4 ALA A 68 -54.21 -148.93 REMARK 500 5 THR A 2 -67.34 -121.32 REMARK 500 5 GLU A 3 -85.00 60.33 REMARK 500 5 THR A 4 -14.99 -140.73 REMARK 500 5 GLN A 8 82.01 55.51 REMARK 500 5 ALA A 14 175.94 59.90 REMARK 500 5 LYS A 19 93.46 57.34 REMARK 500 5 VAL A 25 -163.35 42.74 REMARK 500 5 LYS A 46 19.61 49.80 REMARK 500 6 THR A 4 -169.86 52.95 REMARK 500 6 LYS A 6 -76.76 -63.88 REMARK 500 6 GLN A 10 -30.34 -142.63 REMARK 500 6 ALA A 14 -58.77 -159.95 REMARK 500 6 LYS A 21 72.19 -170.20 REMARK 500 6 CYS A 23 51.91 -147.35 REMARK 500 6 CYS A 24 103.40 60.81 REMARK 500 6 CYS A 26 30.30 -174.35 REMARK 500 6 PHE A 39 -70.69 -73.82 REMARK 500 6 ASN A 40 3.63 -150.82 REMARK 500 7 GLU A 3 104.84 61.34 REMARK 500 7 LYS A 6 13.35 59.55 REMARK 500 7 LYS A 7 -175.54 59.76 REMARK 500 7 GLN A 10 -172.70 60.65 REMARK 500 7 CYS A 24 -77.68 -131.44 REMARK 500 7 VAL A 25 154.33 63.45 REMARK 500 7 GLN A 42 -178.14 58.54 REMARK 500 7 ASP A 43 19.61 55.84 REMARK 500 7 GLU A 45 8.54 59.16 REMARK 500 7 GLU A 64 -172.26 -67.95 REMARK 500 7 VAL A 65 77.95 -116.70 REMARK 500 8 ASP A 5 -21.23 -158.81 REMARK 500 8 LYS A 7 104.48 61.45 REMARK 500 8 GLU A 11 98.41 -160.27 REMARK 500 8 ASN A 12 98.27 58.79 REMARK 500 8 HIS A 13 99.48 59.85 REMARK 500 8 CYS A 16 108.61 61.55 REMARK 500 8 LYS A 19 79.83 52.04 REMARK 500 8 VAL A 25 154.27 66.28 REMARK 500 8 CYS A 26 20.93 -140.45 REMARK 500 8 ASP A 43 -6.84 67.57 REMARK 500 8 GLU A 45 -2.67 64.90 REMARK 500 8 TYR A 61 -71.17 -60.26 REMARK 500 8 GLU A 64 -170.26 -63.88 REMARK 500 8 ALA A 68 104.74 60.15 REMARK 500 9 LYS A 6 106.01 62.00 REMARK 500 9 ALA A 14 -36.51 -132.88 REMARK 500 9 GLU A 15 98.75 59.58 REMARK 500 9 PRO A 20 28.29 -77.57 REMARK 500 9 VAL A 25 -165.64 -75.43 REMARK 500 9 ASP A 43 95.01 58.42 REMARK 500 9 GLU A 64 -176.64 -63.92 REMARK 500 10 THR A 4 124.81 65.08 REMARK 500 10 ASP A 5 115.22 63.07 REMARK 500 10 LYS A 7 98.66 62.44 REMARK 500 10 GLN A 10 -5.06 -150.16 REMARK 500 10 ASN A 12 96.50 56.98 REMARK 500 10 CYS A 16 -7.73 -167.18 REMARK 500 10 GLU A 17 116.74 -166.03 REMARK 500 10 ASP A 18 -71.40 -79.92 REMARK 500 10 PRO A 20 -170.06 -64.14 REMARK 500 10 CYS A 23 -42.99 -145.35 REMARK 500 10 CYS A 24 80.97 -174.35 REMARK 500 10 PHE A 39 -66.47 -91.27 REMARK 500 10 PHE A 63 147.05 -172.62 REMARK 500 10 GLU A 64 -86.02 -80.09 REMARK 500 11 GLU A 3 -2.27 -140.46 REMARK 500 11 GLU A 9 117.72 63.99 REMARK 500 11 HIS A 13 -177.89 58.79 REMARK 500 11 GLU A 15 101.04 58.73 REMARK 500 11 PRO A 22 -160.07 -66.98 REMARK 500 11 CYS A 23 177.16 62.49 REMARK 500 11 CYS A 26 84.70 -154.85 REMARK 500 11 PHE A 63 138.48 -174.90 REMARK 500 11 GLU A 64 -26.59 -166.87 REMARK 500 12 GLU A 3 -64.81 -147.75 REMARK 500 12 ASP A 5 -0.81 -156.47 REMARK 500 12 GLN A 8 16.98 59.35 REMARK 500 12 ASN A 12 -39.64 -147.71 REMARK 500 12 HIS A 13 10.15 59.88 REMARK 500 12 GLU A 15 179.25 60.80 REMARK 500 12 PRO A 20 93.44 -61.14 REMARK 500 12 CYS A 24 -175.22 58.18 REMARK 500 12 VAL A 25 -166.17 43.80 REMARK 500 12 CYS A 26 14.24 -172.33 REMARK 500 12 VAL A 65 79.31 -119.43 REMARK 500 12 ALA A 68 -43.26 -146.13 REMARK 500 13 THR A 4 104.81 60.60 REMARK 500 13 GLU A 9 -84.46 64.12 REMARK 500 13 GLN A 10 61.87 -166.72 REMARK 500 13 GLU A 11 -64.50 -93.31 REMARK 500 13 ASN A 12 96.10 55.15 REMARK 500 13 HIS A 13 -62.17 -96.29 REMARK 500 13 ALA A 14 -67.63 -160.66 REMARK 500 13 GLU A 17 -179.77 60.70 REMARK 500 13 LYS A 19 82.04 52.75 REMARK 500 13 PRO A 22 32.85 -80.00 REMARK 500 13 CYS A 23 -82.44 62.62 REMARK 500 13 CYS A 26 86.52 -67.54 REMARK 500 13 ASN A 40 9.53 -155.17 REMARK 500 13 PHE A 63 159.28 64.07 REMARK 500 13 PRO A 66 108.21 -54.90 REMARK 500 13 ALA A 68 103.00 61.31 REMARK 500 14 THR A 4 102.45 54.48 REMARK 500 14 LYS A 6 92.87 57.99 REMARK 500 14 GLU A 11 -45.73 -154.78 REMARK 500 14 ASN A 12 -174.49 58.11 REMARK 500 14 HIS A 13 -172.82 58.82 REMARK 500 14 ALA A 14 -80.85 62.06 REMARK 500 14 CYS A 16 13.17 -144.24 REMARK 500 14 GLN A 42 -179.74 -69.78 REMARK 500 14 GLU A 64 -57.83 -162.20 REMARK 500 14 ALA A 68 -41.71 -137.00 REMARK 500 15 THR A 4 143.85 64.77 REMARK 500 15 ASP A 5 157.22 64.89 REMARK 500 15 ALA A 14 18.64 59.39 REMARK 500 15 GLU A 17 102.58 59.43 REMARK 500 15 PRO A 20 -179.09 -66.01 REMARK 500 15 PRO A 22 30.56 -79.19 REMARK 500 15 VAL A 25 -169.64 44.20 REMARK 500 15 ASP A 43 90.58 55.39 REMARK 500 15 GLU A 64 -42.74 -150.88 REMARK 500 16 LYS A 6 97.12 57.70 REMARK 500 16 GLN A 8 -83.25 62.40 REMARK 500 16 GLU A 11 -94.92 57.64 REMARK 500 16 ASN A 12 -23.38 -174.20 REMARK 500 16 HIS A 13 102.97 61.28 REMARK 500 16 CYS A 24 -162.60 -75.46 REMARK 500 16 VAL A 25 -168.18 44.79 REMARK 500 16 CYS A 26 27.85 -149.29 REMARK 500 16 ASP A 43 93.85 58.79 REMARK 500 16 PHE A 63 -144.90 -163.83 REMARK 500 16 GLU A 64 157.42 -49.30 REMARK 500 16 VAL A 65 137.16 65.16 REMARK 500 16 PRO A 66 103.63 -38.23 REMARK 500 17 GLU A 3 -73.78 -133.83 REMARK 500 17 THR A 4 95.44 48.95 REMARK 500 17 ASP A 5 104.73 62.68 REMARK 500 17 GLU A 11 -89.97 58.60 REMARK 500 17 ASN A 12 144.39 64.37 REMARK 500 17 CYS A 16 100.71 59.85 REMARK 500 17 GLU A 17 -48.64 -153.69 REMARK 500 17 ASP A 18 -6.85 -145.49 REMARK 500 17 PRO A 22 -72.57 -63.57 REMARK 500 17 CYS A 23 15.58 58.29 REMARK 500 17 VAL A 25 153.10 65.40 REMARK 500 17 PHE A 39 -65.34 -94.26 REMARK 500 17 GLU A 64 -162.15 -73.40 REMARK 500 17 SER A 67 -162.22 48.52 REMARK 500 18 GLU A 3 -173.74 58.17 REMARK 500 18 ASP A 5 -10.23 -158.88 REMARK 500 18 GLU A 9 103.32 60.33 REMARK 500 18 GLU A 11 -31.08 -131.30 REMARK 500 18 ALA A 14 15.56 59.63 REMARK 500 18 PRO A 22 178.88 -57.39 REMARK 500 18 CYS A 23 92.18 59.36 REMARK 500 18 CYS A 24 97.86 57.01 REMARK 500 18 VAL A 25 -157.14 -109.79 REMARK 500 18 VAL A 65 84.71 37.28 REMARK 500 19 GLU A 9 -83.70 -96.05 REMARK 500 19 GLN A 10 11.09 -145.32 REMARK 500 19 GLU A 11 -171.03 57.14 REMARK 500 19 HIS A 13 100.63 59.20 REMARK 500 19 LYS A 21 80.64 -154.50 REMARK 500 19 CYS A 26 26.26 -172.99 REMARK 500 19 PHE A 39 -64.68 -95.52 REMARK 500 19 VAL A 65 73.81 36.92 REMARK 500 19 SER A 67 -79.15 -119.50 REMARK 500 19 ALA A 68 -64.02 -169.43 REMARK 500 20 GLN A 10 -1.11 -151.11 REMARK 500 20 CYS A 16 169.51 62.02 REMARK 500 20 LYS A 21 76.74 65.28 REMARK 500 20 CYS A 26 20.99 -169.24 REMARK 500 20 SER A 44 12.88 -140.28 REMARK 500 20 TYR A 61 -78.16 -123.37 REMARK 500 20 PHE A 63 111.15 66.64 REMARK 500 20 GLU A 64 -1.27 -140.31 REMARK 500 20 SER A 67 -49.68 -131.73 REMARK 500 20 ALA A 68 94.39 58.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1U96 RELATED DB: PDB REMARK 900 SOLUTION STRUCTURE OF YEAST COX17 WITH COPPER BOUND DBREF 1U97 A 2 69 UNP Q12287 COX17_YEAST 1 68 SEQADV 1U97 MET A 1 UNP Q12287 INITIATING METHIONINE SEQRES 1 A 69 MET THR GLU THR ASP LYS LYS GLN GLU GLN GLU ASN HIS SEQRES 2 A 69 ALA GLU CYS GLU ASP LYS PRO LYS PRO CYS CYS VAL CYS SEQRES 3 A 69 LYS PRO GLU LYS GLU GLU ARG ASP THR CYS ILE LEU PHE SEQRES 4 A 69 ASN GLY GLN ASP SER GLU LYS CYS LYS GLU PHE ILE GLU SEQRES 5 A 69 LYS TYR LYS GLU CYS MET LYS GLY TYR GLY PHE GLU VAL SEQRES 6 A 69 PRO SER ALA ASN HELIX 1 1 CYS A 26 ASN A 40 1 15 HELIX 2 2 CYS A 47 GLY A 62 1 16 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL MASTER 294 0 0 2 0 0 0 6 0 0 0 6 END