HEADER HYDROLASE 01-JUL-04 1TWL TITLE INORGANIC PYROPHOSPHATASE FROM PYROCOCCUS FURIOSUS PFU-264096-001 COMPND MOL_ID: 1; COMPND 2 MOLECULE: INORGANIC PYROPHOSPHATASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PYROPHOSPHATE PHOSPHO-HYDROLASE, PPASE; COMPND 5 EC: 3.6.1.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PYROCOCCUS FURIOSUS; SOURCE 3 ORGANISM_TAXID: 2261; SOURCE 4 GENE: PPA, PF0257; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS INORGANIC PYROPHOSPHATASE, STRUCTURAL GENOMICS, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, PSI, SOUTHEAST COLLABORATORY FOR STRUCTURAL GENOMICS, KEYWDS 3 SECSG, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR W.ZHOU,W.TEMPEL,Z.-J.LIU,L.CHEN,L.-L.CLANCY KELLEY,B.D.DILLARD, AUTHOR 2 R.C.HOPKINS,W.B.ARENDALL III,J.P.ROSE,J.C.ENEH,R.C.HOPKINS, AUTHOR 3 F.E.JENNEY JR.,H.S.LEE,T.LI,F.L.POOLE II,C.SHAH,F.J.SUGAR, AUTHOR 4 M.W.W.ADAMS,J.S.RICHARDSON,D.C.RICHARDSON,B.-C.WANG,SOUTHEAST AUTHOR 5 COLLABORATORY FOR STRUCTURAL GENOMICS (SECSG) REVDAT 6 11-OCT-17 1TWL 1 REMARK REVDAT 5 13-JUL-11 1TWL 1 VERSN REVDAT 4 24-FEB-09 1TWL 1 VERSN REVDAT 3 15-FEB-05 1TWL 1 REMARK REVDAT 2 01-FEB-05 1TWL 1 REMARK REVDAT 1 23-NOV-04 1TWL 0 JRNL AUTH W.ZHOU,W.TEMPEL,Z.-J.LIU,L.CHEN,L.-L.CLANCY KELLEY, JRNL AUTH 2 B.D.DILLARD,R.C.HOPKINS,W.B.ARENDALL III,J.P.ROSE,J.C.ENEH, JRNL AUTH 3 R.C.HOPKINS,F.E.JENNEY JR.,H.S.LEE,T.LI,F.L.POOLE II,C.SHAH, JRNL AUTH 4 F.J.SUGAR,M.W.W.ADAMS,J.S.RICHARDSON,D.C.RICHARDSON, JRNL AUTH 5 B.-C.WANG,SOUTHEAST COLLABORATORY FOR STRUCTURAL GENOMICS JRNL TITL INORGANIC PYROPHOSPHATASE FROM PYROCOCCUS FURIOSUS JRNL TITL 2 PFU-264096-001 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REFMAC_5.2.0003 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.36 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 9313 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.257 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 447 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 650 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.71 REMARK 3 BIN R VALUE (WORKING SET) : 0.2570 REMARK 3 BIN FREE R VALUE SET COUNT : 36 REMARK 3 BIN FREE R VALUE : 0.3110 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1370 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 35 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.67 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.02400 REMARK 3 B22 (A**2) : -0.02400 REMARK 3 B33 (A**2) : 0.03600 REMARK 3 B12 (A**2) : -0.01200 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.286 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.230 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.159 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.223 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.945 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.925 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1417 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1298 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1928 ; 1.311 ; 1.960 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3001 ; 0.795 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 170 ; 6.324 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 62 ;37.515 ;23.226 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 225 ;13.961 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;19.230 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 205 ; 0.079 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1557 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 300 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 216 ; 0.191 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1233 ; 0.176 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 677 ; 0.184 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 793 ; 0.083 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 42 ; 0.130 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 17 ; 0.184 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 75 ; 0.240 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 7 ; 0.149 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 892 ; 2.368 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 340 ; 0.575 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1394 ; 3.435 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1172 ; 1.980 ; 3.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 624 ; 2.142 ; 2.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1230 ; 0.735 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 534 ; 3.157 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1829 ; 1.432 ; 3.000 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1TWL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-JUL-04. REMARK 100 THE DEPOSITION ID IS D_1000022974. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-JUN-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9314 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.08200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.38100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: EPMR REMARK 200 STARTING MODEL: PDB ENTRY 1UDE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.73 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.5M K2HPO4, 0.1M TRIS-HCL, PH 8.6, REMARK 280 MODIFIED MICROBATCH, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 56.71700 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 32.74558 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 24.43767 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 56.71700 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 32.74558 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 24.43767 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 56.71700 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 32.74558 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 24.43767 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 56.71700 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 32.74558 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 24.43767 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 56.71700 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 32.74558 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 24.43767 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 56.71700 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 32.74558 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 24.43767 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 65.49115 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 48.87533 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 65.49115 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 48.87533 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 65.49115 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 48.87533 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 65.49115 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 48.87533 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 65.49115 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 48.87533 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 65.49115 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 48.87533 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 1 CHAIN. THE BIOLOGICAL UNIT IS UNKNOWN. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 14890 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 35260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -93.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 113.43400 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 56.71700 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 98.23673 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 -0.500000 0.866025 0.000000 56.71700 REMARK 350 BIOMT2 4 0.866025 0.500000 0.000000 -32.74558 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 -24.43767 REMARK 350 BIOMT1 5 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 5 0.000000 -1.000000 0.000000 65.49115 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 -24.43767 REMARK 350 BIOMT1 6 -0.500000 -0.866025 0.000000 113.43400 REMARK 350 BIOMT2 6 -0.866025 0.500000 0.000000 65.49115 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 -24.43767 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 208 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 213 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 GLY A 0 REMARK 465 SER A 1 REMARK 465 ASP A 66 REMARK 465 GLY A 175 REMARK 465 LYS A 176 REMARK 465 LYS A 177 REMARK 465 GLU A 178 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 2 CG OD1 ND2 REMARK 470 GLU A 8 CB CG CD OE1 OE2 REMARK 470 GLU A 32 CG CD OE1 OE2 REMARK 470 LYS A 35 CG CD CE NZ REMARK 470 LYS A 36 CG CD CE NZ REMARK 470 GLU A 65 CG CD OE1 OE2 REMARK 470 ASP A 67 CG OD1 OD2 REMARK 470 ASP A 98 CG OD1 OD2 REMARK 470 LYS A 117 CG CD CE NZ REMARK 470 ASP A 118 CG OD1 OD2 REMARK 470 LYS A 138 CD CE NZ REMARK 470 GLU A 147 CG CD OE1 OE2 REMARK 470 ILE A 148 CG1 CG2 CD1 REMARK 470 ILE A 149 CG1 CG2 CD1 REMARK 470 GLU A 157 CD OE1 OE2 REMARK 470 GLU A 172 CG CD OE1 OE2 REMARK 470 LYS A 173 CG CD CE NZ REMARK 470 PHE A 174 O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 34 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 ASP A 55 CB - CG - OD2 ANGL. DEV. = 5.4 DEGREES REMARK 500 ASP A 68 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP A 121 CB - CG - OD2 ANGL. DEV. = 6.7 DEGREES REMARK 500 ASP A 124 CB - CG - OD2 ANGL. DEV. = 6.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 12 57.08 -158.56 REMARK 500 LEU A 83 14.86 81.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: PFU-264096-001 RELATED DB: TARGETDB DBREF 1TWL A 2 178 UNP Q8U438 IPYR_PYRFU 2 178 SEQADV 1TWL ALA A -7 UNP Q8U438 EXPRESSION TAG SEQADV 1TWL HIS A -6 UNP Q8U438 EXPRESSION TAG SEQADV 1TWL HIS A -5 UNP Q8U438 EXPRESSION TAG SEQADV 1TWL HIS A -4 UNP Q8U438 EXPRESSION TAG SEQADV 1TWL HIS A -3 UNP Q8U438 EXPRESSION TAG SEQADV 1TWL HIS A -2 UNP Q8U438 EXPRESSION TAG SEQADV 1TWL HIS A -1 UNP Q8U438 EXPRESSION TAG SEQADV 1TWL GLY A 0 UNP Q8U438 EXPRESSION TAG SEQADV 1TWL SER A 1 UNP Q8U438 EXPRESSION TAG SEQRES 1 A 186 ALA HIS HIS HIS HIS HIS HIS GLY SER ASN PRO PHE HIS SEQRES 2 A 186 ASP LEU GLU PRO GLY PRO ASP VAL PRO GLU VAL VAL TYR SEQRES 3 A 186 ALA ILE ILE GLU ILE PRO LYS GLY SER ARG ASN LYS TYR SEQRES 4 A 186 GLU LEU ASP LYS LYS THR GLY LEU LEU LYS LEU ASP ARG SEQRES 5 A 186 VAL LEU TYR SER PRO PHE PHE TYR PRO VAL ASP TYR GLY SEQRES 6 A 186 ILE ILE PRO ARG THR TRP TYR GLU ASP ASP ASP PRO PHE SEQRES 7 A 186 ASP ILE MET VAL ILE MET ARG GLU PRO VAL TYR PRO LEU SEQRES 8 A 186 THR ILE ILE GLU ALA ARG PRO ILE GLY LEU PHE LYS MET SEQRES 9 A 186 ILE ASP SER GLY ASP LYS ASP TYR LYS VAL LEU ALA VAL SEQRES 10 A 186 PRO VAL GLU ASP PRO TYR PHE LYS ASP TRP LYS ASP ILE SEQRES 11 A 186 ASP ASP VAL PRO LYS ALA PHE LEU ASP GLU ILE ALA HIS SEQRES 12 A 186 PHE PHE LYS ARG TYR LYS GLU LEU GLN GLY LYS GLU ILE SEQRES 13 A 186 ILE VAL GLU GLY TRP GLU GLY ALA GLU ALA ALA LYS ARG SEQRES 14 A 186 GLU ILE LEU ARG ALA ILE GLU MET TYR LYS GLU LYS PHE SEQRES 15 A 186 GLY LYS LYS GLU FORMUL 2 HOH *35(H2 O) HELIX 1 1 ASN A 2 LEU A 7 1 6 HELIX 2 2 ASP A 113 LYS A 117 5 5 HELIX 3 3 ASP A 121 VAL A 125 5 5 HELIX 4 4 PRO A 126 TYR A 140 1 15 HELIX 5 5 LYS A 141 GLY A 145 5 5 HELIX 6 6 ALA A 156 PHE A 174 1 19 SHEET 1 A 8 ASP A 101 LYS A 102 0 SHEET 2 A 8 ILE A 148 GLY A 155 0 SHEET 3 A 8 VAL A 17 ILE A 23 0 SHEET 4 A 8 ASP A 55 ILE A 58 -1 O ILE A 58 N ILE A 20 SHEET 5 A 8 ASP A 71 VAL A 74 -1 O VAL A 74 N ASP A 55 SHEET 6 A 8 LYS A 105 PRO A 110 1 O VAL A 106 N MET A 73 SHEET 7 A 8 ILE A 85 ASP A 98 -1 N ARG A 89 O VAL A 109 SHEET 8 A 8 ILE A 148 GLY A 155 -1 O ILE A 149 N ILE A 97 SHEET 1 B 2 ASN A 29 LEU A 33 0 SHEET 2 B 2 LEU A 40 VAL A 45 -1 O ARG A 44 N LYS A 30 CISPEP 1 VAL A 13 PRO A 14 0 -1.04 CRYST1 113.434 113.434 73.313 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008800 0.005100 0.000000 0.00000 SCALE2 0.000000 0.010200 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013600 0.00000 MASTER 412 0 0 6 10 0 0 6 0 0 0 15 END