HEADER LYASE 30-JUN-04 1TVZ TITLE CRYSTAL STRUCTURE OF 3-HYDROXY-3-METHYLGLUTARYL-COENZYME A SYNTHASE TITLE 2 FROM STAPHYLOCOCCUS AUREUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3-HYDROXY-3-METHYLGLUTARYL-COA SYNTHASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: HMG-COA SYNTHASE; COMPND 5 EC: 4.1.3.5; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 GENE: MVAS; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET28A(+) KEYWDS HMG-COA SYNTHASE; HMGS, COENZYME A; THIOLASE FOLD; CONDENSING ENZYME; KEYWDS 2 CHOLESTEROL BIOSYNTHESIS, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR N.CAMPOBASSO,M.PATEL,I.E.WILDING,H.KALLENDER,M.ROSENBERG,M.GWYNN REVDAT 4 13-JUL-11 1TVZ 1 VERSN REVDAT 3 24-FEB-09 1TVZ 1 VERSN REVDAT 2 01-FEB-05 1TVZ 1 JRNL REMARK REVDAT 1 31-AUG-04 1TVZ 0 JRNL AUTH N.CAMPOBASSO,M.PATEL,I.E.WILDING,H.KALLENDER,M.ROSENBERG, JRNL AUTH 2 M.GWYNN JRNL TITL STAPHYLOCOCCUS AUREUS 3-HYDROXY-3-METHYLGLUTARYL-COA JRNL TITL 2 SYNTHASE: CRYSTAL STRUCTURE AND MECHANISM JRNL REF J.BIOL.CHEM. V. 279 44883 2004 JRNL REFN ISSN 0021-9258 JRNL PMID 15292254 JRNL DOI 10.1074/JBC.M407882200 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 4.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.1 REMARK 3 NUMBER OF REFLECTIONS : 29725 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.191 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1577 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2024 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.1870 REMARK 3 BIN FREE R VALUE SET COUNT : 115 REMARK 3 BIN FREE R VALUE : 0.2210 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3040 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 5 REMARK 3 SOLVENT ATOMS : 198 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.91 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.12000 REMARK 3 B22 (A**2) : -0.12000 REMARK 3 B33 (A**2) : 0.19000 REMARK 3 B12 (A**2) : -0.06000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.151 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.131 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.083 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.911 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3106 ; 0.014 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4211 ; 1.337 ; 1.947 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 386 ; 5.694 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 462 ; 0.099 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2398 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1492 ; 0.212 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 189 ; 0.117 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 49 ; 0.179 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 23 ; 0.153 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1923 ; 0.631 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3083 ; 1.213 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1183 ; 2.171 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1128 ; 3.496 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1TVZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-JUL-04. REMARK 100 THE RCSB ID CODE IS RCSB022952. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-SEP-00 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : OSMIC MIRRORS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32374 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 99.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04800 REMARK 200 FOR THE DATA SET : 15.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.27000 REMARK 200 FOR SHELL : 6.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIR REMARK 200 SOFTWARE USED: MLPHARE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: TRIS, AMMONIUM SULFATE, PH 8.0, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+1/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 38.03833 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 76.07667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 38.03833 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 76.07667 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 38.03833 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 76.07667 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 38.03833 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 76.07667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A DIMER GENERATED FROM THE REMARK 300 MONOMER IN THE ASYMMETRIC UNIT BY THE OPERATION: -X+1, -Y, Z REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -30.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 119.40100 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL A 311 CB CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CG PRO A 100 O HOH A 1117 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 139 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP A 181 CB - CG - OD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 ASP A 354 CB - CG - OD2 ANGL. DEV. = 6.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 85 -54.01 -121.86 REMARK 500 GLU A 109 83.72 -169.28 REMARK 500 ALA A 110 -124.11 35.76 REMARK 500 GLU A 173 55.79 -94.98 REMARK 500 ASP A 174 19.37 -142.94 REMARK 500 TYR A 183 66.81 -108.51 REMARK 500 VAL A 273 -51.73 -129.24 REMARK 500 TYR A 277 -110.10 54.86 REMARK 500 ASP A 293 57.04 -105.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1001 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1TXT RELATED DB: PDB REMARK 900 HMGS COMPLEXED WITH ACETOACETYL-COA DBREF 1TVZ A 1 388 GB 9937361 AAG02422 1 388 SEQADV 1TVZ CSD A 111 GB 9937361 CYS 111 MODIFIED RESIDUE SEQADV 1TVZ GLU A 320 GB 9937361 VAL 320 CONFLICT SEQRES 1 A 388 MET THR ILE GLY ILE ASP LYS ILE ASN PHE TYR VAL PRO SEQRES 2 A 388 LYS TYR TYR VAL ASP MET ALA LYS LEU ALA GLU ALA ARG SEQRES 3 A 388 GLN VAL ASP PRO ASN LYS PHE LEU ILE GLY ILE GLY GLN SEQRES 4 A 388 THR GLU MET ALA VAL SER PRO VAL ASN GLN ASP ILE VAL SEQRES 5 A 388 SER MET GLY ALA ASN ALA ALA LYS ASP ILE ILE THR ASP SEQRES 6 A 388 GLU ASP LYS LYS LYS ILE GLY MET VAL ILE VAL ALA THR SEQRES 7 A 388 GLU SER ALA VAL ASP ALA ALA LYS ALA ALA ALA VAL GLN SEQRES 8 A 388 ILE HIS ASN LEU LEU GLY ILE GLN PRO PHE ALA ARG CYS SEQRES 9 A 388 PHE GLU MET LYS GLU ALA CSD TYR ALA ALA THR PRO ALA SEQRES 10 A 388 ILE GLN LEU ALA LYS ASP TYR LEU ALA THR ARG PRO ASN SEQRES 11 A 388 GLU LYS VAL LEU VAL ILE ALA THR ASP THR ALA ARG TYR SEQRES 12 A 388 GLY LEU ASN SER GLY GLY GLU PRO THR GLN GLY ALA GLY SEQRES 13 A 388 ALA VAL ALA MET VAL ILE ALA HIS ASN PRO SER ILE LEU SEQRES 14 A 388 ALA LEU ASN GLU ASP ALA VAL ALA TYR THR GLU ASP VAL SEQRES 15 A 388 TYR ASP PHE TRP ARG PRO THR GLY HIS LYS TYR PRO LEU SEQRES 16 A 388 VAL ASP GLY ALA LEU SER LYS ASP ALA TYR ILE ARG SER SEQRES 17 A 388 PHE GLN GLN SER TRP ASN GLU TYR ALA LYS ARG GLN GLY SEQRES 18 A 388 LYS SER LEU ALA ASP PHE ALA SER LEU CYS PHE HIS VAL SEQRES 19 A 388 PRO PHE THR LYS MET GLY LYS LYS ALA LEU GLU SER ILE SEQRES 20 A 388 ILE ASP ASN ALA ASP GLU THR THR GLN GLU ARG LEU ARG SEQRES 21 A 388 SER GLY TYR GLU ASP ALA VAL ASP TYR ASN ARG TYR VAL SEQRES 22 A 388 GLY ASN ILE TYR THR GLY SER LEU TYR LEU SER LEU ILE SEQRES 23 A 388 SER LEU LEU GLU ASN ARG ASP LEU GLN ALA GLY GLU THR SEQRES 24 A 388 ILE GLY LEU PHE SER TYR GLY SER GLY SER VAL VAL GLU SEQRES 25 A 388 PHE TYR SER ALA THR LEU VAL GLU GLY TYR LYS ASP HIS SEQRES 26 A 388 LEU ASP GLN ALA ALA HIS LYS ALA LEU LEU ASN ASN ARG SEQRES 27 A 388 THR GLU VAL SER VAL ASP ALA TYR GLU THR PHE PHE LYS SEQRES 28 A 388 ARG PHE ASP ASP VAL GLU PHE ASP GLU GLU GLN ASP ALA SEQRES 29 A 388 VAL HIS GLU ASP ARG HIS ILE PHE TYR LEU SER ASN ILE SEQRES 30 A 388 GLU ASN ASN VAL ARG GLU TYR HIS ARG PRO GLU MODRES 1TVZ CSD A 111 CYS 3-SULFINOALANINE HET CSD A 111 8 HET SO4 A1001 5 HETNAM CSD 3-SULFINOALANINE HETNAM SO4 SULFATE ION HETSYN CSD S-CYSTEINESULFINIC ACID; S-SULFINOCYSTEINE FORMUL 1 CSD C3 H7 N O4 S FORMUL 2 SO4 O4 S 2- FORMUL 3 HOH *198(H2 O) HELIX 1 1 MET A 19 ARG A 26 1 8 HELIX 2 2 ASP A 29 ILE A 35 1 7 HELIX 3 3 ASP A 50 ASP A 61 1 12 HELIX 4 4 THR A 64 LYS A 70 1 7 HELIX 5 5 ALA A 87 GLY A 97 1 11 HELIX 6 6 GLU A 109 TYR A 112 5 4 HELIX 7 7 ALA A 113 ALA A 126 1 14 HELIX 8 8 GLY A 149 GLN A 153 5 5 HELIX 9 9 LEU A 200 GLY A 221 1 22 HELIX 10 10 SER A 223 PHE A 227 5 5 HELIX 11 11 PHE A 236 ILE A 248 1 13 HELIX 12 12 ASP A 252 TYR A 272 1 21 HELIX 13 13 ILE A 276 THR A 278 5 3 HELIX 14 14 GLY A 279 ARG A 292 1 14 HELIX 15 15 GLY A 321 LEU A 326 5 6 HELIX 16 16 ASP A 327 ASN A 337 1 11 HELIX 17 17 SER A 342 VAL A 356 1 15 HELIX 18 18 ALA A 364 ASP A 368 5 5 SHEET 1 A 8 ARG A 103 MET A 107 0 SHEET 2 A 8 ILE A 71 ALA A 77 1 N VAL A 74 O ARG A 103 SHEET 3 A 8 LYS A 132 ALA A 141 1 O ILE A 136 N ILE A 75 SHEET 4 A 8 GLY A 154 HIS A 164 -1 O VAL A 158 N ALA A 137 SHEET 5 A 8 ILE A 3 TYR A 11 -1 N ASP A 6 O VAL A 161 SHEET 6 A 8 LEU A 169 LEU A 171 -1 O LEU A 171 N ILE A 3 SHEET 7 A 8 VAL A 310 LEU A 318 -1 O THR A 317 N ALA A 170 SHEET 8 A 8 VAL A 176 THR A 179 -1 N TYR A 178 O VAL A 311 SHEET 1 B 9 ARG A 103 MET A 107 0 SHEET 2 B 9 ILE A 71 ALA A 77 1 N VAL A 74 O ARG A 103 SHEET 3 B 9 LYS A 132 ALA A 141 1 O ILE A 136 N ILE A 75 SHEET 4 B 9 GLY A 154 HIS A 164 -1 O VAL A 158 N ALA A 137 SHEET 5 B 9 ILE A 3 TYR A 11 -1 N ASP A 6 O VAL A 161 SHEET 6 B 9 LEU A 169 LEU A 171 -1 O LEU A 171 N ILE A 3 SHEET 7 B 9 VAL A 310 LEU A 318 -1 O THR A 317 N ALA A 170 SHEET 8 B 9 THR A 299 GLY A 306 -1 N LEU A 302 O TYR A 314 SHEET 9 B 9 SER A 229 PHE A 232 1 N SER A 229 O GLY A 301 SHEET 1 C 3 GLU A 41 VAL A 44 0 SHEET 2 C 3 TYR A 15 ASP A 18 -1 N VAL A 17 O MET A 42 SHEET 3 C 3 THR A 339 VAL A 341 1 O VAL A 341 N TYR A 16 SHEET 1 D 2 PHE A 185 TRP A 186 0 SHEET 2 D 2 LEU A 195 VAL A 196 -1 O LEU A 195 N TRP A 186 SHEET 1 E 2 TYR A 373 GLU A 378 0 SHEET 2 E 2 VAL A 381 HIS A 385 -1 O GLU A 383 N ASN A 376 LINK C ALA A 110 N CSD A 111 1555 1555 1.33 LINK C CSD A 111 N TYR A 112 1555 1555 1.33 CISPEP 1 GLY A 308 SER A 309 0 -2.01 SITE 1 AC1 3 LYS A 70 LYS A 132 ARG A 369 CRYST1 119.401 119.401 114.115 90.00 90.00 120.00 P 64 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008375 0.004835 0.000000 0.00000 SCALE2 0.000000 0.009671 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008763 0.00000 MASTER 358 0 2 18 24 0 1 6 0 0 0 30 END