HEADER SERINE PROTEINASE INHIBITOR 06-JUL-94 1TUR TITLE SOLUTION STRUCTURE OF TURKEY OVOMUCOID THIRD DOMAIN AS DETERMINED FROM TITLE 2 NUCLEAR MAGNETIC RESONANCE DATA COMPND MOL_ID: 1; COMPND 2 MOLECULE: OVOMUCOID; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MELEAGRIS GALLOPAVO; SOURCE 3 ORGANISM_COMMON: TURKEY; SOURCE 4 ORGANISM_TAXID: 9103 KEYWDS SERINE PROTEINASE INHIBITOR EXPDTA SOLUTION NMR NUMMDL 12 AUTHOR A.M.KREZEL,P.DARBA,A.D.ROBERTSON,J.FEJZO,S.MACURA,J.L.MARKLEY REVDAT 3 29-NOV-17 1TUR 1 REMARK HELIX REVDAT 2 24-FEB-09 1TUR 1 VERSN REVDAT 1 15-OCT-94 1TUR 0 JRNL AUTH A.M.KREZEL,P.DARBA,A.D.ROBERTSON,J.FEJZO,S.MACURA, JRNL AUTH 2 J.L.MARKLEY JRNL TITL SOLUTION STRUCTURE OF TURKEY OVOMUCOID THIRD DOMAIN AS JRNL TITL 2 DETERMINED FROM NUCLEAR MAGNETIC RESONANCE DATA. JRNL REF J.MOL.BIOL. V. 242 203 1994 JRNL REFN ISSN 0022-2836 JRNL PMID 8089842 JRNL DOI 10.1006/JMBI.1994.1573 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : DSPACE 4.0 REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1TUR COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000176863. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : NULL REMARK 210 PH : NULL REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : NULL REMARK 210 SPECTROMETER MODEL : NULL REMARK 210 SPECTROMETER MANUFACTURER : NULL REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 12 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 5 130.24 -176.41 REMARK 500 1 ASN A 45 39.30 77.44 REMARK 500 2 ALA A 2 130.77 -174.90 REMARK 500 2 ALA A 3 145.20 -174.90 REMARK 500 2 SER A 5 103.23 -160.23 REMARK 500 2 ARG A 21 68.28 -161.49 REMARK 500 2 ASN A 33 -161.62 -165.56 REMARK 500 2 PHE A 53 -169.91 -60.48 REMARK 500 3 ASN A 28 30.18 71.07 REMARK 500 3 PHE A 53 -175.19 -62.91 REMARK 500 4 ALA A 2 -162.75 61.61 REMARK 500 4 ALA A 3 126.33 -171.53 REMARK 500 4 SER A 5 100.83 -177.02 REMARK 500 4 PRO A 14 30.51 -98.19 REMARK 500 4 ARG A 21 65.05 177.66 REMARK 500 4 ASN A 33 -160.23 -164.94 REMARK 500 4 LEU A 48 -70.24 -83.09 REMARK 500 4 THR A 49 170.55 62.06 REMARK 500 5 ALA A 3 91.84 61.56 REMARK 500 5 ALA A 15 158.29 67.11 REMARK 500 5 ASN A 33 -158.97 -168.72 REMARK 500 5 ASN A 45 52.50 70.70 REMARK 500 5 HIS A 52 154.55 179.58 REMARK 500 6 ASN A 28 39.70 72.52 REMARK 500 6 ASN A 33 -165.25 -167.67 REMARK 500 7 ASN A 28 46.93 76.17 REMARK 500 7 ASN A 33 -159.89 -173.21 REMARK 500 7 ASN A 45 61.97 71.59 REMARK 500 7 LEU A 48 -77.49 -61.49 REMARK 500 7 THR A 49 167.17 70.73 REMARK 500 7 HIS A 52 156.72 175.49 REMARK 500 7 PHE A 53 -173.63 -61.20 REMARK 500 8 ALA A 3 -163.96 61.54 REMARK 500 8 ASN A 33 -160.76 -172.55 REMARK 500 8 ASN A 45 55.30 70.09 REMARK 500 8 PHE A 53 -175.37 -61.04 REMARK 500 9 ALA A 15 -175.54 -174.63 REMARK 500 9 ASN A 28 -52.63 -177.94 REMARK 500 9 ASN A 33 -162.21 -169.93 REMARK 500 9 ASN A 45 64.80 69.67 REMARK 500 9 THR A 47 -54.34 -124.73 REMARK 500 9 PHE A 53 -176.12 -61.45 REMARK 500 10 ALA A 3 -177.51 61.86 REMARK 500 10 SER A 5 126.18 -174.35 REMARK 500 10 ASN A 28 -55.16 -176.22 REMARK 500 10 LYS A 29 174.30 -59.44 REMARK 500 10 ASN A 33 -154.97 -161.02 REMARK 500 10 LEU A 48 -76.01 -61.92 REMARK 500 10 THR A 49 179.38 56.20 REMARK 500 10 PHE A 53 -177.46 -61.95 REMARK 500 REMARK 500 THIS ENTRY HAS 61 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 2 TYR A 11 0.08 SIDE CHAIN REMARK 500 3 GLU A 10 0.09 SIDE CHAIN REMARK 500 3 TYR A 11 0.07 SIDE CHAIN REMARK 500 3 TYR A 20 0.07 SIDE CHAIN REMARK 500 4 ASP A 27 0.07 SIDE CHAIN REMARK 500 7 GLU A 10 0.07 SIDE CHAIN REMARK 500 7 ASP A 27 0.08 SIDE CHAIN REMARK 500 8 TYR A 11 0.07 SIDE CHAIN REMARK 500 9 GLU A 10 0.07 SIDE CHAIN REMARK 500 9 TYR A 20 0.07 SIDE CHAIN REMARK 500 10 GLU A 10 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 1 LEU A 18 -11.95 REMARK 500 1 LYS A 34 -11.10 REMARK 500 2 ARG A 21 10.65 REMARK 500 2 LEU A 23 10.93 REMARK 500 2 TYR A 31 10.95 REMARK 500 3 TYR A 11 10.70 REMARK 500 3 ASN A 28 -10.83 REMARK 500 3 ALA A 40 -10.19 REMARK 500 3 LYS A 55 -10.24 REMARK 500 4 LYS A 13 -13.91 REMARK 500 4 ARG A 21 11.98 REMARK 500 4 ASN A 28 -10.24 REMARK 500 5 LYS A 34 -11.25 REMARK 500 6 CYS A 16 -10.71 REMARK 500 6 TYR A 31 10.04 REMARK 500 7 VAL A 6 11.34 REMARK 500 7 ASN A 28 -11.05 REMARK 500 7 LYS A 34 -10.49 REMARK 500 8 SER A 5 -10.80 REMARK 500 8 LEU A 23 10.18 REMARK 500 8 GLY A 32 -10.50 REMARK 500 8 LYS A 34 -11.84 REMARK 500 9 GLU A 10 -10.69 REMARK 500 9 TYR A 11 12.54 REMARK 500 9 CYS A 16 -10.89 REMARK 500 9 ASN A 28 12.31 REMARK 500 9 TYR A 31 10.28 REMARK 500 10 VAL A 6 10.81 REMARK 500 10 ARG A 21 10.87 REMARK 500 10 PRO A 22 -10.61 REMARK 500 10 ASP A 27 10.45 REMARK 500 10 ASN A 28 11.54 REMARK 500 12 PRO A 22 -10.71 REMARK 500 12 LYS A 34 -10.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: REA REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: NULL DBREF 1TUR A 1 56 UNP P68390 IOVO_MELGA 130 185 SEQRES 1 A 56 LEU ALA ALA VAL SER VAL ASP CYS SER GLU TYR PRO LYS SEQRES 2 A 56 PRO ALA CYS THR LEU GLU TYR ARG PRO LEU CYS GLY SER SEQRES 3 A 56 ASP ASN LYS THR TYR GLY ASN LYS CYS ASN PHE CYS ASN SEQRES 4 A 56 ALA VAL VAL GLU SER ASN GLY THR LEU THR LEU SER HIS SEQRES 5 A 56 PHE GLY LYS CYS HELIX 1 AHE ASN A 33 SER A 44 1 12 SHEET 1 BSH 3 ASN A 28 GLY A 32 0 SHEET 2 BSH 3 ARG A 21 SER A 26 -1 SHEET 3 BSH 3 THR A 49 GLY A 54 -1 SSBOND 1 CYS A 8 CYS A 38 1555 1555 2.04 SSBOND 2 CYS A 16 CYS A 35 1555 1555 2.03 SSBOND 3 CYS A 24 CYS A 56 1555 1555 2.03 CISPEP 1 TYR A 11 PRO A 12 1 17.03 CISPEP 2 TYR A 11 PRO A 12 2 21.75 CISPEP 3 TYR A 11 PRO A 12 3 3.31 CISPEP 4 TYR A 11 PRO A 12 4 5.15 CISPEP 5 TYR A 11 PRO A 12 5 11.69 CISPEP 6 TYR A 11 PRO A 12 6 16.63 CISPEP 7 TYR A 11 PRO A 12 7 23.92 CISPEP 8 TYR A 11 PRO A 12 8 17.18 CISPEP 9 TYR A 11 PRO A 12 9 20.23 CISPEP 10 TYR A 11 PRO A 12 10 24.81 CISPEP 11 TYR A 11 PRO A 12 11 25.56 CISPEP 12 TYR A 11 PRO A 12 12 7.26 SITE 1 REA 2 LEU A 18 GLU A 19 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL MASTER 210 0 0 1 3 0 1 6 0 0 0 5 END