HEADER LYASE 24-JUN-04 1TUF TITLE CRYSTAL STRUCTURE OF DIAMINOPIMELATE DECARBOXYLASE FROM M. JANNASCHI COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIAMINOPIMELATE DECARBOXYLASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: DAP DECARBOXYLASE; COMPND 5 EC: 4.1.1.20; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHANOCALDOCOCCUS JANNASCHII; SOURCE 3 ORGANISM_TAXID: 2190; SOURCE 4 GENE: LYSA, MJ1097; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21DE3; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET T7 KEYWDS ANTIBIOTIC RESISTANCE, DIAMNOPIMILATE DECARBOXYLASE, LYSINE KEYWDS 2 BIOSYNTHESIS, STRUCTURAL GENOMICS, NYSGXRC, T135, PSI, PROTEIN KEYWDS 3 STRUCTURE INITIATIVE, NEW YORK SGX RESEARCH CENTER FOR STRUCTURAL KEYWDS 4 GENOMICS, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR K.RAJASHANKAR,S.R.RAY,J.B.BONANNO,M.G.PINHO,G.HE,H.DE LENCASTRE, AUTHOR 2 A.TOMASZ,S.K.BURLEY,NEW YORK SGX RESEARCH CENTER FOR STRUCTURAL AUTHOR 3 GENOMICS (NYSGXRC) REVDAT 4 03-FEB-21 1TUF 1 AUTHOR JRNL REMARK SEQADV REVDAT 4 2 1 LINK REVDAT 3 24-FEB-09 1TUF 1 VERSN REVDAT 2 25-JAN-05 1TUF 1 AUTHOR KEYWDS REMARK REVDAT 1 20-JUL-04 1TUF 0 JRNL AUTH K.RAJASHANKAR,S.R.RAY,J.B.BONANNO,M.G.PINHO,G.HE, JRNL AUTH 2 H.DE LENCASTRE,A.TOMASZ,S.K.BURLEY JRNL TITL COCRYSTAL STRUCTURES OF DIAMINOPIMELATE DECARBOXYLASE: JRNL TITL 2 MECHANISM, EVOLUTION, AND INHIBITION OF AN ANTIBIOTIC JRNL TITL 3 RESISTANCE ACCESSORY FACTOR JRNL REF STRUCTURE V. 10 1499 2002 JRNL REFN ISSN 0969-2126 JRNL PMID 12429091 JRNL DOI 10.1016/S0969-2126(02)00880-8 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 493146.240 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 88.3 REMARK 3 NUMBER OF REFLECTIONS : 35468 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.253 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1765 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.006 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.55 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 59.60 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3682 REMARK 3 BIN R VALUE (WORKING SET) : 0.2860 REMARK 3 BIN FREE R VALUE : 0.3480 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.90 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 189 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.025 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6824 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 26 REMARK 3 SOLVENT ATOMS : 292 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 45.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 6.60000 REMARK 3 B22 (A**2) : 6.60000 REMARK 3 B33 (A**2) : -13.21000 REMARK 3 B12 (A**2) : 4.90000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.29 REMARK 3 ESD FROM SIGMAA (A) : 0.28 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.37 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.38 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.200 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.40 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.710 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.320 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.160 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.090 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.150 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.35 REMARK 3 BSOL : 31.69 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : PLL.PAR REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : PLL.TOP REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: DATA IS COMPLETE TO 2.6A. 2.6 TO 2.4 REMARK 3 SHELL IS LESS COMPLETE (~60%), HOWEVER THIS DATA WAS USED IN REMARK 3 REFINEMENT. REMARK 4 REMARK 4 1TUF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-JUN-04. REMARK 100 THE DEPOSITION ID IS D_1000022912. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-AUG-01; 28-APR-01 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : NSLS; CHESS REMARK 200 BEAMLINE : X25; F2 REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 1.4; 1.07 REMARK 200 MONOCHROMATOR : SI(111); SI(111) REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : BRANDEIS - B4; ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36391 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.3 REMARK 200 DATA REDUNDANCY : 7.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07700 REMARK 200 FOR THE DATA SET : 4.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.46 REMARK 200 COMPLETENESS FOR SHELL (%) : 53.4 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.29200 REMARK 200 FOR SHELL : 4.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SIRAS REMARK 200 SOFTWARE USED: MLPHARE REMARK 200 STARTING MODEL: MODEL BUILT WITH ELECTRON DENSITY MAP CALCULATED REMARK 200 USING A PLATINUM DERIVATIVE. REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12% PEG6000, 0.1M TRIS-HCL, 20MM REMARK 280 MGCL2, 25MM AZELAIC ACID, PH 8.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 169.50100 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 339.00200 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 254.25150 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 423.75250 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 84.75050 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 169.50100 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 339.00200 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 423.75250 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 254.25150 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 84.75050 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: PROTOMERS A AND B TOGETHER FORM THE BIOLOGICAL ASSEMBLY. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9190 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -35.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 23060 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 55700 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -97.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 84.75050 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 18 78.81 -102.58 REMARK 500 GLU A 69 32.90 -94.50 REMARK 500 GLU A 70 -49.23 -132.25 REMARK 500 ASN A 85 112.50 -178.95 REMARK 500 THR A 230 42.45 -107.53 REMARK 500 PRO A 268 56.18 -67.16 REMARK 500 LYS A 291 -0.26 -58.56 REMARK 500 GLU A 304 65.07 -118.98 REMARK 500 ASP A 335 7.22 -68.82 REMARK 500 ASN A 360 41.95 -85.44 REMARK 500 LYS A 386 112.28 -27.24 REMARK 500 HIS A 446 0.66 -69.75 REMARK 500 LYS B 24 -97.84 -84.94 REMARK 500 ASN B 85 111.47 174.98 REMARK 500 ALA B 144 148.56 -173.61 REMARK 500 THR B 181 -76.79 -48.86 REMARK 500 LEU B 189 10.17 -65.84 REMARK 500 GLU B 304 59.86 -116.75 REMARK 500 SER B 308 0.44 -68.04 REMARK 500 THR B 312 0.12 -69.06 REMARK 500 LYS B 386 114.46 -26.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AZ1 A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AZ1 B 503 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGXRC-T135 RELATED DB: TARGETDB DBREF 1TUF A 15 448 UNP Q58497 DCDA_METJA 5 438 DBREF 1TUF B 15 448 UNP Q58497 DCDA_METJA 5 438 SEQADV 1TUF LLP A 83 UNP Q58497 LYS 73 MODIFIED RESIDUE SEQADV 1TUF LLP B 83 UNP Q58497 LYS 73 MODIFIED RESIDUE SEQRES 1 A 434 PHE LEU GLY ASN ASP THR VAL GLU ILE LYS ASP GLY ARG SEQRES 2 A 434 PHE PHE ILE ASP GLY TYR ASP ALA ILE GLU LEU ALA GLU SEQRES 3 A 434 LYS PHE GLY THR PRO LEU TYR VAL MET SER GLU GLU GLN SEQRES 4 A 434 ILE LYS ILE ASN TYR ASN ARG TYR ILE GLU ALA PHE LYS SEQRES 5 A 434 ARG TRP GLU GLU GLU THR GLY LYS GLU PHE ILE VAL ALA SEQRES 6 A 434 TYR ALA TYR LLP ALA ASN ALA ASN LEU ALA ILE THR ARG SEQRES 7 A 434 LEU LEU ALA LYS LEU GLY CYS GLY ALA ASP VAL VAL SER SEQRES 8 A 434 GLY GLY GLU LEU TYR ILE ALA LYS LEU SER ASN VAL PRO SEQRES 9 A 434 SER LYS LYS ILE VAL PHE ASN GLY ASN CYS LYS THR LYS SEQRES 10 A 434 GLU GLU ILE ILE MET GLY ILE GLU ALA ASN ILE ARG ALA SEQRES 11 A 434 PHE ASN VAL ASP SER ILE SER GLU LEU ILE LEU ILE ASN SEQRES 12 A 434 GLU THR ALA LYS GLU LEU GLY GLU THR ALA ASN VAL ALA SEQRES 13 A 434 PHE ARG ILE ASN PRO ASN VAL ASN PRO LYS THR HIS PRO SEQRES 14 A 434 LYS ILE SER THR GLY LEU LYS LYS ASN LYS PHE GLY LEU SEQRES 15 A 434 ASP VAL GLU SER GLY ILE ALA MET LYS ALA ILE LYS MET SEQRES 16 A 434 ALA LEU GLU MET GLU TYR VAL ASN VAL VAL GLY VAL HIS SEQRES 17 A 434 CYS HIS ILE GLY SER GLN LEU THR ASP ILE SER PRO PHE SEQRES 18 A 434 ILE GLU GLU THR ARG LYS VAL MET ASP PHE VAL VAL GLU SEQRES 19 A 434 LEU LYS GLU GLU GLY ILE GLU ILE GLU ASP VAL ASN LEU SEQRES 20 A 434 GLY GLY GLY LEU GLY ILE PRO TYR TYR LYS ASP LYS GLN SEQRES 21 A 434 ILE PRO THR GLN LYS ASP LEU ALA ASP ALA ILE ILE ASN SEQRES 22 A 434 THR MET LEU LYS TYR LYS ASP LYS VAL GLU MET PRO ASN SEQRES 23 A 434 LEU ILE LEU GLU PRO GLY ARG SER LEU VAL ALA THR ALA SEQRES 24 A 434 GLY TYR LEU LEU GLY LYS VAL HIS HIS ILE LYS GLU THR SEQRES 25 A 434 PRO VAL THR LYS TRP VAL MET ILE ASP ALA GLY MET ASN SEQRES 26 A 434 ASP MET MET ARG PRO ALA MET TYR GLU ALA TYR HIS HIS SEQRES 27 A 434 ILE ILE ASN CYS LYS VAL LYS ASN GLU LYS GLU VAL VAL SEQRES 28 A 434 SER ILE ALA GLY GLY LEU CYS GLU SER SER ASP VAL PHE SEQRES 29 A 434 GLY ARG ASP ARG GLU LEU ASP LYS VAL GLU VAL GLY ASP SEQRES 30 A 434 VAL LEU ALA ILE PHE ASP VAL GLY ALA TYR GLY ILE SER SEQRES 31 A 434 MET ALA ASN ASN TYR ASN ALA ARG GLY ARG PRO ARG MET SEQRES 32 A 434 VAL LEU THR SER LYS LYS GLY VAL PHE LEU ILE ARG GLU SEQRES 33 A 434 ARG GLU THR TYR ALA ASP LEU ILE ALA LYS ASP ILE VAL SEQRES 34 A 434 PRO PRO HIS LEU LEU SEQRES 1 B 434 PHE LEU GLY ASN ASP THR VAL GLU ILE LYS ASP GLY ARG SEQRES 2 B 434 PHE PHE ILE ASP GLY TYR ASP ALA ILE GLU LEU ALA GLU SEQRES 3 B 434 LYS PHE GLY THR PRO LEU TYR VAL MET SER GLU GLU GLN SEQRES 4 B 434 ILE LYS ILE ASN TYR ASN ARG TYR ILE GLU ALA PHE LYS SEQRES 5 B 434 ARG TRP GLU GLU GLU THR GLY LYS GLU PHE ILE VAL ALA SEQRES 6 B 434 TYR ALA TYR LLP ALA ASN ALA ASN LEU ALA ILE THR ARG SEQRES 7 B 434 LEU LEU ALA LYS LEU GLY CYS GLY ALA ASP VAL VAL SER SEQRES 8 B 434 GLY GLY GLU LEU TYR ILE ALA LYS LEU SER ASN VAL PRO SEQRES 9 B 434 SER LYS LYS ILE VAL PHE ASN GLY ASN CYS LYS THR LYS SEQRES 10 B 434 GLU GLU ILE ILE MET GLY ILE GLU ALA ASN ILE ARG ALA SEQRES 11 B 434 PHE ASN VAL ASP SER ILE SER GLU LEU ILE LEU ILE ASN SEQRES 12 B 434 GLU THR ALA LYS GLU LEU GLY GLU THR ALA ASN VAL ALA SEQRES 13 B 434 PHE ARG ILE ASN PRO ASN VAL ASN PRO LYS THR HIS PRO SEQRES 14 B 434 LYS ILE SER THR GLY LEU LYS LYS ASN LYS PHE GLY LEU SEQRES 15 B 434 ASP VAL GLU SER GLY ILE ALA MET LYS ALA ILE LYS MET SEQRES 16 B 434 ALA LEU GLU MET GLU TYR VAL ASN VAL VAL GLY VAL HIS SEQRES 17 B 434 CYS HIS ILE GLY SER GLN LEU THR ASP ILE SER PRO PHE SEQRES 18 B 434 ILE GLU GLU THR ARG LYS VAL MET ASP PHE VAL VAL GLU SEQRES 19 B 434 LEU LYS GLU GLU GLY ILE GLU ILE GLU ASP VAL ASN LEU SEQRES 20 B 434 GLY GLY GLY LEU GLY ILE PRO TYR TYR LYS ASP LYS GLN SEQRES 21 B 434 ILE PRO THR GLN LYS ASP LEU ALA ASP ALA ILE ILE ASN SEQRES 22 B 434 THR MET LEU LYS TYR LYS ASP LYS VAL GLU MET PRO ASN SEQRES 23 B 434 LEU ILE LEU GLU PRO GLY ARG SER LEU VAL ALA THR ALA SEQRES 24 B 434 GLY TYR LEU LEU GLY LYS VAL HIS HIS ILE LYS GLU THR SEQRES 25 B 434 PRO VAL THR LYS TRP VAL MET ILE ASP ALA GLY MET ASN SEQRES 26 B 434 ASP MET MET ARG PRO ALA MET TYR GLU ALA TYR HIS HIS SEQRES 27 B 434 ILE ILE ASN CYS LYS VAL LYS ASN GLU LYS GLU VAL VAL SEQRES 28 B 434 SER ILE ALA GLY GLY LEU CYS GLU SER SER ASP VAL PHE SEQRES 29 B 434 GLY ARG ASP ARG GLU LEU ASP LYS VAL GLU VAL GLY ASP SEQRES 30 B 434 VAL LEU ALA ILE PHE ASP VAL GLY ALA TYR GLY ILE SER SEQRES 31 B 434 MET ALA ASN ASN TYR ASN ALA ARG GLY ARG PRO ARG MET SEQRES 32 B 434 VAL LEU THR SER LYS LYS GLY VAL PHE LEU ILE ARG GLU SEQRES 33 B 434 ARG GLU THR TYR ALA ASP LEU ILE ALA LYS ASP ILE VAL SEQRES 34 B 434 PRO PRO HIS LEU LEU MODRES 1TUF LLP A 83 LYS MODRES 1TUF LLP B 83 LYS HET LLP A 83 24 HET LLP B 83 24 HET AZ1 A 502 13 HET AZ1 B 503 13 HETNAM LLP (2S)-2-AMINO-6-[[3-HYDROXY-2-METHYL-5- HETNAM 2 LLP (PHOSPHONOOXYMETHYL)PYRIDIN-4- HETNAM 3 LLP YL]METHYLIDENEAMINO]HEXANOIC ACID HETNAM AZ1 AZELAIC ACID HETSYN LLP N'-PYRIDOXYL-LYSINE-5'-MONOPHOSPHATE FORMUL 1 LLP 2(C14 H22 N3 O7 P) FORMUL 3 AZ1 2(C9 H16 O4) FORMUL 5 HOH *292(H2 O) HELIX 1 1 ALA A 35 GLY A 43 1 9 HELIX 2 2 GLU A 51 LYS A 66 1 16 HELIX 3 3 ARG A 67 THR A 72 1 6 HELIX 4 4 LLP A 83 ASN A 85 5 3 HELIX 5 5 ASN A 87 LEU A 97 1 11 HELIX 6 6 SER A 105 SER A 115 1 11 HELIX 7 7 PRO A 118 LYS A 120 5 3 HELIX 8 8 THR A 130 ALA A 140 1 11 HELIX 9 9 SER A 149 GLY A 164 1 16 HELIX 10 10 HIS A 182 ASN A 192 1 11 HELIX 11 11 GLY A 201 GLU A 212 1 12 HELIX 12 12 ASP A 231 GLU A 251 1 21 HELIX 13 13 THR A 277 LYS A 291 1 15 HELIX 14 14 GLY A 306 ALA A 311 1 6 HELIX 15 15 MET A 342 GLU A 348 1 7 HELIX 16 16 GLY A 402 ALA A 406 5 5 HELIX 17 17 THR A 433 ILE A 438 1 6 HELIX 18 18 PRO A 444 LEU A 448 5 5 HELIX 19 19 ALA B 35 GLY B 43 1 9 HELIX 20 20 GLU B 51 GLY B 73 1 23 HELIX 21 21 LLP B 83 ASN B 85 5 3 HELIX 22 22 ASN B 87 LEU B 97 1 11 HELIX 23 23 SER B 105 SER B 115 1 11 HELIX 24 24 PRO B 118 LYS B 120 5 3 HELIX 25 25 THR B 130 ALA B 140 1 11 HELIX 26 26 SER B 149 GLY B 164 1 16 HELIX 27 27 HIS B 182 ASN B 192 1 11 HELIX 28 28 GLY B 201 LEU B 211 1 11 HELIX 29 29 ILE B 232 GLU B 251 1 20 HELIX 30 30 THR B 277 LYS B 291 1 15 HELIX 31 31 GLY B 306 ALA B 311 1 6 HELIX 32 32 MET B 342 GLU B 348 1 7 HELIX 33 33 GLY B 402 ALA B 406 5 5 HELIX 34 34 THR B 433 ILE B 438 1 6 HELIX 35 35 PRO B 444 LEU B 448 5 5 SHEET 1 A 3 VAL A 21 ILE A 23 0 SHEET 2 A 3 PHE A 28 ILE A 30 -1 O PHE A 29 N GLU A 22 SHEET 3 A 3 TYR A 33 ASP A 34 -1 O TYR A 33 N ILE A 30 SHEET 1 B 6 ILE A 353 ASN A 355 0 SHEET 2 B 6 VAL A 392 ILE A 395 -1 O ALA A 394 N ILE A 354 SHEET 3 B 6 GLY A 314 GLU A 325 -1 N LEU A 316 O ILE A 395 SHEET 4 B 6 LYS A 330 ILE A 334 -1 O TRP A 331 N LYS A 324 SHEET 5 B 6 LYS A 362 ALA A 368 1 O SER A 366 N VAL A 332 SHEET 6 B 6 VAL A 377 ASP A 385 -1 O ARG A 382 N VAL A 365 SHEET 1 C 6 ILE A 353 ASN A 355 0 SHEET 2 C 6 VAL A 392 ILE A 395 -1 O ALA A 394 N ILE A 354 SHEET 3 C 6 GLY A 314 GLU A 325 -1 N LEU A 316 O ILE A 395 SHEET 4 C 6 LEU A 46 SER A 50 -1 N LEU A 46 O LEU A 317 SHEET 5 C 6 ARG A 416 SER A 421 1 O VAL A 418 N MET A 49 SHEET 6 C 6 GLY A 424 ARG A 429 -1 O PHE A 426 N LEU A 419 SHEET 1 D 9 VAL A 216 VAL A 218 0 SHEET 2 D 9 ALA A 167 PHE A 171 1 N ALA A 167 O ASN A 217 SHEET 3 D 9 ALA A 144 VAL A 147 1 O PHE A 145 N ALA A 170 SHEET 4 D 9 ILE A 122 PHE A 124 1 N PHE A 124 O ALA A 144 SHEET 5 D 9 GLY A 100 VAL A 103 1 N VAL A 103 O VAL A 123 SHEET 6 D 9 PHE A 76 ALA A 81 1 N TYR A 80 O ASP A 102 SHEET 7 D 9 ASN A 300 LEU A 303 1 O LEU A 303 N ALA A 79 SHEET 8 D 9 ASP A 258 ASN A 260 1 N VAL A 259 O ILE A 302 SHEET 9 D 9 GLY A 220 HIS A 222 1 N VAL A 221 O ASN A 260 SHEET 1 E 2 ILE A 173 ASN A 174 0 SHEET 2 E 2 LEU A 196 ASP A 197 1 O LEU A 196 N ASN A 174 SHEET 1 F 3 VAL B 21 ILE B 23 0 SHEET 2 F 3 PHE B 28 ILE B 30 -1 O PHE B 29 N GLU B 22 SHEET 3 F 3 TYR B 33 ASP B 34 -1 O TYR B 33 N ILE B 30 SHEET 1 G 6 ILE B 353 ASN B 355 0 SHEET 2 G 6 VAL B 392 ILE B 395 -1 O ALA B 394 N ILE B 354 SHEET 3 G 6 GLY B 314 GLU B 325 -1 N GLY B 318 O LEU B 393 SHEET 4 G 6 LYS B 330 ILE B 334 -1 O MET B 333 N HIS B 322 SHEET 5 G 6 LYS B 362 ALA B 368 1 O ALA B 368 N VAL B 332 SHEET 6 G 6 VAL B 377 ASP B 385 -1 O ARG B 382 N VAL B 365 SHEET 1 H 6 ILE B 353 ASN B 355 0 SHEET 2 H 6 VAL B 392 ILE B 395 -1 O ALA B 394 N ILE B 354 SHEET 3 H 6 GLY B 314 GLU B 325 -1 N GLY B 318 O LEU B 393 SHEET 4 H 6 LEU B 46 SER B 50 -1 N LEU B 46 O LEU B 317 SHEET 5 H 6 ARG B 416 SER B 421 1 O VAL B 418 N MET B 49 SHEET 6 H 6 GLY B 424 ARG B 429 -1 O PHE B 426 N LEU B 419 SHEET 1 I10 LEU B 196 ASP B 197 0 SHEET 2 I10 ALA B 167 ASN B 174 1 N ARG B 172 O LEU B 196 SHEET 3 I10 VAL B 216 HIS B 222 1 O VAL B 219 N VAL B 169 SHEET 4 I10 ASP B 258 ASN B 260 1 O ASP B 258 N VAL B 219 SHEET 5 I10 ASN B 300 LEU B 303 1 O ILE B 302 N VAL B 259 SHEET 6 I10 PHE B 76 ALA B 81 1 N ALA B 79 O LEU B 303 SHEET 7 I10 GLY B 100 VAL B 103 1 O ASP B 102 N TYR B 80 SHEET 8 I10 ILE B 122 PHE B 124 1 O VAL B 123 N ALA B 101 SHEET 9 I10 ALA B 144 VAL B 147 1 O ASN B 146 N PHE B 124 SHEET 10 I10 ALA B 167 ASN B 174 1 O ALA B 170 N PHE B 145 LINK C TYR A 82 N LLP A 83 1555 1555 1.33 LINK C LLP A 83 N ALA A 84 1555 1555 1.33 LINK C TYR B 82 N LLP B 83 1555 1555 1.32 LINK C LLP B 83 N ALA B 84 1555 1555 1.33 CISPEP 1 THR A 44 PRO A 45 0 0.16 CISPEP 2 THR B 44 PRO B 45 0 -0.55 SITE 1 AC1 11 LLP A 83 HIS A 224 GLY A 226 SER A 227 SITE 2 AC1 11 ARG A 307 ARG A 343 TYR A 347 HOH A 532 SITE 3 AC1 11 GLU B 373 SER B 374 TYR B 409 SITE 1 AC2 6 CYS A 372 GLU A 373 SER B 227 ARG B 307 SITE 2 AC2 6 ARG B 343 TYR B 347 CRYST1 80.806 80.806 508.503 90.00 90.00 120.00 P 61 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012375 0.007145 0.000000 0.00000 SCALE2 0.000000 0.014290 0.000000 0.00000 SCALE3 0.000000 0.000000 0.001967 0.00000 MASTER 320 0 4 35 51 0 5 6 0 0 0 68 END