HEADER ANTIBIOTIC 02-MAY-04 1T54 TITLE ANTIBIOTIC ACTIVITY AND STRUCTURAL ANALYSIS OF A SCORPION- TITLE 2 DERIVED ANTIMICROBIAL PEPTIDE ISCT AND ITS ANALOGS COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOTOXIC LINEAR PEPTIDE ISCT; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ISCT; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: OPISTHACANTHUS MADAGASCARIENSIS; SOURCE 3 ORGANISM_TAXID: 167108; SOURCE 4 TISSUE: VENOM; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS COIL-HELIX, ANTIBIOTIC EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR K.LEE,S.Y.SHIN,K.KIM,S.S.LIM,K.S.HAHM,Y.KIM REVDAT 2 24-FEB-09 1T54 1 VERSN REVDAT 1 19-OCT-04 1T54 0 JRNL AUTH K.LEE,S.Y.SHIN,K.KIM,S.S.LIM,K.S.HAHM,Y.KIM JRNL TITL ANTIBIOTIC ACTIVITY AND STRUCTURAL ANALYSIS OF THE JRNL TITL 2 SCORPION-DERIVED ANTIMICROBIAL PEPTIDE ISCT AND JRNL TITL 3 ITS ANALOGS JRNL REF BIOCHEM.BIOPHYS.RES.COMMUN. V. 323 712 2004 JRNL REFN ISSN 0006-291X JRNL PMID 15369808 JRNL DOI 10.1016/J.BBRC.2004.08.144 REMARK 1 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : DGII 2000.1 REMARK 3 AUTHORS : HAVEL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1T54 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 10-MAY-04. REMARK 100 THE RCSB ID CODE IS RCSB022323. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 308 REMARK 210 PH : 4.0 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : 1ATM REMARK 210 SAMPLE CONTENTS : 1.0MM PEPTIDE; 200MM SDS-D25 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY, 2D TOCSY, DQF-COSY REMARK 210 SPECTROMETER FIELD STRENGTH : 400 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : FELIX 2000.1, X-PLOR 3.851 REMARK 210 METHOD USED : DISTANCE GEOMETRY, SIMULATED REMARK 210 ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THIS STRUCTURE WAS DETERMINED USING STANDARD 2D REMARK 210 HOMONUCLEAR TECHNIQUES. REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LEU A 2 95.55 -56.94 REMARK 500 1 ILE A 9 -35.86 -157.57 REMARK 500 2 LEU A 2 88.70 60.75 REMARK 500 2 ALA A 6 20.24 -158.22 REMARK 500 2 ILE A 9 -37.49 -138.23 REMARK 500 3 ILE A 9 -45.46 -143.13 REMARK 500 4 LYS A 4 29.66 38.17 REMARK 500 4 LEU A 12 -141.02 179.24 REMARK 500 5 LYS A 4 17.21 -140.34 REMARK 500 5 GLU A 7 -39.59 179.84 REMARK 500 5 ILE A 9 -37.81 -154.29 REMARK 500 5 LYS A 10 -73.25 -45.00 REMARK 500 5 LEU A 12 -73.91 -64.84 REMARK 500 6 LEU A 2 -155.75 43.50 REMARK 500 6 LYS A 4 91.28 54.34 REMARK 500 6 ILE A 9 -36.01 -158.87 REMARK 500 6 LEU A 12 -74.52 173.68 REMARK 500 7 LYS A 4 78.91 -171.30 REMARK 500 7 ALA A 6 18.20 -155.97 REMARK 500 7 GLU A 7 -54.26 72.02 REMARK 500 7 ILE A 9 -35.18 -131.31 REMARK 500 7 LEU A 12 -172.95 46.07 REMARK 500 8 LYS A 4 51.54 -162.46 REMARK 500 8 LEU A 12 -89.96 56.32 REMARK 500 9 ILE A 9 -37.21 -143.01 REMARK 500 9 LYS A 10 -73.17 -44.35 REMARK 500 10 LEU A 2 69.00 -65.92 REMARK 500 10 GLU A 7 -75.77 176.75 REMARK 500 10 LEU A 12 -172.63 65.60 REMARK 500 11 LEU A 2 103.61 59.67 REMARK 500 12 LEU A 2 74.66 46.73 REMARK 500 12 LYS A 4 62.82 67.25 REMARK 500 12 ALA A 6 21.32 -160.57 REMARK 500 12 ILE A 9 -35.17 -148.01 REMARK 500 13 LEU A 2 61.73 -115.20 REMARK 500 13 LYS A 4 78.93 -150.13 REMARK 500 13 ALA A 6 28.96 -170.78 REMARK 500 13 GLU A 7 -74.75 -38.79 REMARK 500 13 ILE A 9 -37.05 -159.72 REMARK 500 13 LEU A 12 -165.56 -70.76 REMARK 500 14 LYS A 4 39.57 -97.80 REMARK 500 14 ILE A 9 -37.43 -142.83 REMARK 500 14 LEU A 12 -170.68 -178.66 REMARK 500 15 LEU A 2 -152.50 50.36 REMARK 500 15 LYS A 4 73.69 53.01 REMARK 500 15 ILE A 9 -42.18 -175.44 REMARK 500 15 LEU A 12 57.94 -179.29 REMARK 500 16 GLU A 7 -30.14 175.42 REMARK 500 16 ILE A 9 -43.72 -130.98 REMARK 500 16 LEU A 12 -74.70 -79.53 REMARK 500 17 LEU A 2 -88.90 -54.77 REMARK 500 17 ILE A 9 -35.70 -161.24 REMARK 500 17 LEU A 12 -50.64 -132.90 REMARK 500 18 LEU A 2 110.03 71.03 REMARK 500 18 ILE A 9 -36.21 -139.48 REMARK 500 18 LEU A 12 -144.99 176.14 REMARK 500 19 LEU A 2 -158.64 -161.06 REMARK 500 19 ILE A 9 -42.20 -142.43 REMARK 500 19 LEU A 12 -87.08 -142.10 REMARK 500 20 ILE A 9 -37.54 -157.85 REMARK 500 20 LEU A 12 -175.59 58.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NH2 A 14 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1T51 RELATED DB: PDB REMARK 900 THE SAME PROTEIN OF WILD TYPE REMARK 900 RELATED ID: 1T52 RELATED DB: PDB REMARK 900 THE SAME PROTEIN WITH E7K MUTANT REMARK 900 RELATED ID: 1T55 RELATED DB: PDB REMARK 900 THE SAME PROTEIN WITH E7K, G8P AND S11K MUTANT DBREF 1T54 A 1 13 UNP Q8MMJ7 TXT1_OPIMA 24 36 SEQADV 1T54 ALA A 6 UNP Q8MMJ7 TRP 29 ENGINEERED SEQRES 1 A 14 ILE LEU GLY LYS ILE ALA GLU GLY ILE LYS SER LEU PHE SEQRES 2 A 14 NH2 HET NH2 A 14 3 HETNAM NH2 AMINO GROUP FORMUL 1 NH2 H2 N LINK C PHE A 13 N NH2 A 14 1555 1555 1.31 SITE 1 AC1 1 PHE A 13 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL MASTER 139 0 1 0 0 0 1 6 0 0 0 2 END