HEADER STRUCTURAL PROTEIN 25-FEB-04 1SH6 TITLE CRYSTAL STRUCTURE OF ACTIN-BINDING DOMAIN OF MOUSE PLECTIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PLECTIN 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ACTIN-BINDING DOMAIN; COMPND 5 SYNONYM: PLTN; PCN; PLECTIN ISOFORM PLEC 1,2ALPHA; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PBN120 KEYWDS PLECTIN; ACTIN-BINDING DOMAIN; CALPONIN-HOMOLOGY DOMAIN; KEYWDS 2 STRUCTURAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.SEVCIK,L.URBANIKOVA REVDAT 2 24-FEB-09 1SH6 1 VERSN REVDAT 1 25-MAY-04 1SH6 0 JRNL AUTH J.SEVCIK,L.URBANIKOVA,J.KOSTAN,L.JANDA,G.WICHE JRNL TITL ACTIN-BINDING DOMAIN OF MOUSE PLECTIN: CRYSTAL JRNL TITL 2 STRUCTURE AND BINDING TO VIMENTIN JRNL REF EUR.J.BIOCHEM. V. 271 1873 2004 JRNL REFN ISSN 0014-2956 JRNL PMID 15128297 JRNL DOI 10.1111/J.1432-1033.2004.04095.X REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH L.URBANIKOVA,L.JANDA,A.POPOV,G.WICHE,J.SEVCIK REMARK 1 TITL PURIFICATION, CRYSTALLIZATION AND PRELIMINARY REMARK 1 TITL 2 X-RAY ANALYSIS OF THE PLECTIN ACTIN-BINDING DOMAIN REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 58 1368 2002 REMARK 1 REFN ISSN 0907-4449 REMARK 1 DOI 10.1107/S0907444902010120 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 3 NUMBER OF REFLECTIONS : 15889 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.300 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 848 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.02 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1048 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 86.30 REMARK 3 BIN R VALUE (WORKING SET) : 0.2110 REMARK 3 BIN FREE R VALUE SET COUNT : 59 REMARK 3 BIN FREE R VALUE : 0.3810 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3774 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 174 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.57 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.62000 REMARK 3 B22 (A**2) : 0.88000 REMARK 3 B33 (A**2) : -0.27000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.215 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.144 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.103 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.893 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1921 ; 0.037 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 1754 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2597 ; 2.594 ; 1.944 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4073 ; 1.276 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 229 ; 8.705 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 288 ; 0.210 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2113 ; 0.016 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 387 ; 0.021 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 511 ; 0.250 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2181 ; 0.267 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 1216 ; 0.114 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 74 ; 0.221 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 19 ; 0.215 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 45 ; 0.297 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 4 ; 0.138 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1146 ; 2.385 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1856 ; 3.573 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 775 ; 5.268 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 741 ; 7.264 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 1921 ; 2.775 ; 2.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 58 ;17.960 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 1884 ; 6.458 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 1SH6 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-MAR-04. REMARK 100 THE RCSB ID CODE IS RCSB021705. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-OCT-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X11 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8120 REMARK 200 MONOCHROMATOR : SI111 REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17114 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : 5.100 REMARK 200 R MERGE (I) : 0.03800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 33.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 86.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 0.31000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8000, CACODYLATE, CALCIUM REMARK 280 ACETATE, PH 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 16.25850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 72.35850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 25.61300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 72.35850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 16.25850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 25.61300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 SER A 2 REMARK 465 HIS A 3 REMARK 465 MET A 4 REMARK 465 GLU A 5 REMARK 465 PHE A 6 REMARK 465 ASP A 7 REMARK 465 ARG A 238 REMARK 465 VAL A 239 REMARK 465 PRO A 240 REMARK 465 GLY A 241 REMARK 465 ALA A 242 REMARK 465 GLN A 243 REMARK 465 GLU A 244 REMARK 465 PHE A 245 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 68 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 150 CG CD OE1 NE2 REMARK 470 ARG A 202 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NE2 GLN A 78 OD1 ASP A 82 1.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 VAL A 12 CB VAL A 12 CG2 0.188 REMARK 500 LYS A 19 CB LYS A 19 CG -0.240 REMARK 500 GLU A 42 CD GLU A 42 OE1 0.070 REMARK 500 VAL A 56 CB VAL A 56 CG1 -0.156 REMARK 500 PHE A 71 CB PHE A 71 CG 0.114 REMARK 500 LYS A 73 CD LYS A 73 CE 0.165 REMARK 500 LYS A 73 CE LYS A 73 NZ 0.184 REMARK 500 ASP A 97 CB ASP A 97 CG -0.132 REMARK 500 PHE A 157 CD1 PHE A 157 CE1 -0.121 REMARK 500 ASN A 182 CB ASN A 182 CG -0.157 REMARK 500 GLU A 201 CD GLU A 201 OE1 0.120 REMARK 500 VAL A 229 CB VAL A 229 CG2 -0.147 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 10 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 ILE A 26 CG1 - CB - CG2 ANGL. DEV. = 16.7 DEGREES REMARK 500 LYS A 27 CD - CE - NZ ANGL. DEV. = 18.0 DEGREES REMARK 500 ASP A 39 CB - CG - OD1 ANGL. DEV. = 8.5 DEGREES REMARK 500 LEU A 40 CA - CB - CG ANGL. DEV. = 15.5 DEGREES REMARK 500 LEU A 40 CB - CG - CD2 ANGL. DEV. = 11.0 DEGREES REMARK 500 ASP A 43 CB - CG - OD2 ANGL. DEV. = 7.2 DEGREES REMARK 500 ARG A 45 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG A 45 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 ASP A 60 CB - CG - OD2 ANGL. DEV. = 6.3 DEGREES REMARK 500 ASP A 82 CB - CG - OD2 ANGL. DEV. = 7.0 DEGREES REMARK 500 LEU A 84 CB - CG - CD1 ANGL. DEV. = 13.7 DEGREES REMARK 500 ARG A 87 NE - CZ - NH1 ANGL. DEV. = -3.0 DEGREES REMARK 500 ASP A 98 CB - CG - OD2 ANGL. DEV. = 7.1 DEGREES REMARK 500 ASP A 131 CB - CG - OD2 ANGL. DEV. = 6.3 DEGREES REMARK 500 ARG A 165 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 ASP A 221 CB - CG - OD2 ANGL. DEV. = 7.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 69 158.08 -31.45 REMARK 500 ASN A 93 109.60 -161.88 REMARK 500 ILE A 123 106.20 -58.49 REMARK 500 ASP A 131 51.41 -115.05 REMARK 500 THR A 158 -89.69 -122.87 REMARK 500 HIS A 172 64.39 -59.62 REMARK 500 ARG A 173 -7.82 -149.16 REMARK 500 HIS A 174 21.13 -151.73 REMARK 500 ARG A 208 83.50 -67.43 REMARK 500 MET A 236 71.83 -163.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LEU A 91 VAL A 92 -144.19 REMARK 500 ASP A 131 MET A 132 139.37 REMARK 500 ARG A 173 HIS A 174 148.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1SH5 RELATED DB: PDB DBREF 1SH6 A 7 243 UNP Q9QXS1 PLEC1_MOUSE 181 417 SEQADV 1SH6 GLY A 1 UNP Q9QXS1 CLONING ARTIFACT SEQADV 1SH6 SER A 2 UNP Q9QXS1 CLONING ARTIFACT SEQADV 1SH6 HIS A 3 UNP Q9QXS1 CLONING ARTIFACT SEQADV 1SH6 MET A 4 UNP Q9QXS1 CLONING ARTIFACT SEQADV 1SH6 GLU A 5 UNP Q9QXS1 CLONING ARTIFACT SEQADV 1SH6 PHE A 6 UNP Q9QXS1 CLONING ARTIFACT SEQADV 1SH6 GLU A 244 UNP Q9QXS1 CLONING ARTIFACT SEQADV 1SH6 PHE A 245 UNP Q9QXS1 CLONING ARTIFACT SEQRES 1 A 245 GLY SER HIS MET GLU PHE ASP GLU ARG ASP ARG VAL GLN SEQRES 2 A 245 LYS LYS THR PHE THR LYS TRP VAL ASN LYS HIS LEU ILE SEQRES 3 A 245 LYS HIS TRP ARG ALA GLU ALA GLN ARG HIS ILE SER ASP SEQRES 4 A 245 LEU TYR GLU ASP LEU ARG ASP GLY HIS ASN LEU ILE SER SEQRES 5 A 245 LEU LEU GLU VAL LEU SER GLY ASP SER LEU PRO ARG GLU SEQRES 6 A 245 LYS GLY ARG MET ARG PHE HIS LYS LEU GLN ASN VAL GLN SEQRES 7 A 245 ILE ALA LEU ASP TYR LEU ARG HIS ARG GLN VAL LYS LEU SEQRES 8 A 245 VAL ASN ILE ARG ASN ASP ASP ILE ALA ASP GLY ASN PRO SEQRES 9 A 245 LYS LEU THR LEU GLY LEU ILE TRP THR ILE ILE LEU HIS SEQRES 10 A 245 PHE GLN ILE SER ASP ILE GLN VAL SER GLY GLN SER GLU SEQRES 11 A 245 ASP MET THR ALA LYS GLU LYS LEU LEU LEU TRP SER GLN SEQRES 12 A 245 ARG MET VAL GLU GLY TYR GLN GLY LEU ARG CYS ASP ASN SEQRES 13 A 245 PHE THR THR SER TRP ARG ASP GLY ARG LEU PHE ASN ALA SEQRES 14 A 245 ILE ILE HIS ARG HIS LYS PRO MET LEU ILE ASP MET ASN SEQRES 15 A 245 LYS VAL TYR ARG GLN THR ASN LEU GLU ASN LEU ASP GLN SEQRES 16 A 245 ALA PHE SER VAL ALA GLU ARG ASP LEU GLY VAL THR ARG SEQRES 17 A 245 LEU LEU ASP PRO GLU ASP VAL ASP VAL PRO GLN PRO ASP SEQRES 18 A 245 GLU LYS SER ILE ILE THR TYR VAL SER SER LEU TYR ASP SEQRES 19 A 245 ALA MET PRO ARG VAL PRO GLY ALA GLN GLU PHE FORMUL 2 HOH *58(H2 O) HELIX 1 1 GLU A 8 ILE A 26 1 19 HELIX 2 2 ARG A 30 GLN A 34 5 5 HELIX 3 3 GLY A 47 GLY A 59 1 13 HELIX 4 4 MET A 69 ARG A 87 1 19 HELIX 5 5 ARG A 95 ASP A 101 1 7 HELIX 6 6 ASN A 103 GLN A 119 1 17 HELIX 7 7 ILE A 120 ILE A 123 5 4 HELIX 8 8 THR A 133 VAL A 146 1 14 HELIX 9 9 THR A 158 ARG A 162 5 5 HELIX 10 10 GLY A 164 HIS A 172 1 9 HELIX 11 11 ASP A 180 GLN A 187 1 8 HELIX 12 12 THR A 188 GLY A 205 1 18 HELIX 13 13 ASP A 211 ASP A 216 1 6 HELIX 14 14 ASP A 221 MET A 236 1 16 CRYST1 32.517 51.226 144.717 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.030753 0.000000 0.000000 0.00000 SCALE2 0.000000 0.019521 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006910 0.00000 MASTER 387 0 0 14 0 0 0 6 0 0 0 19 END