HEADER TRANSFERASE 14-NOV-03 1RHX TITLE HIGH-RESOLUTION NMR STRUCTURE OF A PUTATIVE SULFUR TRANSFERASE TITLE 2 (TM0979) FROM THERMOTOGA MARITIMA COMPND MOL_ID: 1; COMPND 2 MOLECULE: CONSERVED HYPOTHETICAL PROTEIN TM0979; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOTOGA MARITIMA; SOURCE 3 ORGANISM_TAXID: 2336; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DSRH, STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, KEYWDS 2 JCSG, PROTEIN STRUCTURE INITIATIVE, PSI, TRANSFERASE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR W.PETI,T.HERRMANN,K.WUTHRICH,JOINT CENTER FOR STRUCTURAL GENOMICS AUTHOR 2 (JCSG) REVDAT 4 28-JUL-10 1RHX 1 HEADER TITLE KEYWDS REVDAT 3 24-FEB-09 1RHX 1 VERSN REVDAT 2 12-APR-05 1RHX 1 JRNL REVDAT 1 21-DEC-04 1RHX 0 JRNL AUTH W.PETI,T.HERRMANN,O.ZAGNITKO,S.K.GRZECHNIK,K.WUTHRICH JRNL TITL NMR STRUCTURE OF THE CONSERVED HYPOTHETICAL PROTEIN TM0979 JRNL TITL 2 FROM THERMOTOGA MARITIMA. JRNL REF PROTEINS V. 59 387 2005 JRNL REFN ISSN 0887-3585 JRNL PMID 15723348 JRNL DOI 10.1002/PROT.20352 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : DYANA 6.0 REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1RHX COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-NOV-03. REMARK 100 THE RCSB ID CODE IS RCSB020756. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 313; 313 REMARK 210 PH : 6.0; 6.0 REMARK 210 IONIC STRENGTH : 50 MM NACL; 50 MM NACL REMARK 210 PRESSURE : AMBIENT; AMBIENT REMARK 210 SAMPLE CONTENTS : 2 MM U-15N TM0979; 10 MM U-15N/ REMARK 210 13C TM0979 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C- REMARK 210 SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE; DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 3.5, XEASY 1 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 9 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 2 ASP A 77 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 5 ARG A 58 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 8 TYR A 49 CB - CG - CD1 ANGL. DEV. = -3.9 DEGREES REMARK 500 10 TYR A 72 CB - CG - CD2 ANGL. DEV. = -4.6 DEGREES REMARK 500 15 ASP A 77 CB - CG - OD1 ANGL. DEV. = 5.9 DEGREES REMARK 500 17 LEU A 78 CB - CG - CD1 ANGL. DEV. = 10.5 DEGREES REMARK 500 18 ASP A 77 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LEU A 5 136.14 171.18 REMARK 500 1 VAL A 6 47.74 -145.22 REMARK 500 1 TYR A 8 36.97 -144.09 REMARK 500 1 ASP A 11 38.42 -150.26 REMARK 500 1 VAL A 14 -50.70 163.71 REMARK 500 1 GLU A 15 42.20 -149.64 REMARK 500 1 LYS A 16 -72.33 -177.75 REMARK 500 1 GLU A 25 38.38 -84.53 REMARK 500 1 GLN A 32 -107.76 27.61 REMARK 500 1 ALA A 38 38.28 -79.81 REMARK 500 1 LEU A 39 42.67 174.16 REMARK 500 1 LEU A 42 -153.50 -154.94 REMARK 500 1 LYS A 66 35.96 -81.93 REMARK 500 1 LEU A 79 -100.84 -72.29 REMARK 500 1 LYS A 84 38.33 -155.62 REMARK 500 1 PHE A 85 37.48 -154.13 REMARK 500 2 LEU A 5 123.72 -171.13 REMARK 500 2 TYR A 8 37.89 -150.81 REMARK 500 2 ASP A 11 38.06 -149.94 REMARK 500 2 VAL A 14 -33.27 164.62 REMARK 500 2 GLU A 15 -14.20 -141.05 REMARK 500 2 LYS A 16 -60.33 -145.95 REMARK 500 2 GLN A 32 -106.34 28.81 REMARK 500 2 ALA A 38 39.62 -83.56 REMARK 500 2 LEU A 39 49.70 -177.82 REMARK 500 2 LEU A 42 -172.61 -170.65 REMARK 500 2 GLU A 80 98.47 -66.36 REMARK 500 2 GLU A 83 59.46 -162.54 REMARK 500 2 LYS A 84 37.74 -142.73 REMARK 500 2 PHE A 85 51.05 -177.41 REMARK 500 3 VAL A 6 52.00 -145.24 REMARK 500 3 TYR A 8 37.79 -146.55 REMARK 500 3 VAL A 14 -49.51 164.00 REMARK 500 3 GLU A 15 23.72 -140.10 REMARK 500 3 LYS A 16 -60.81 -171.51 REMARK 500 3 SER A 21 91.14 -177.73 REMARK 500 3 GLU A 25 38.75 -87.26 REMARK 500 3 GLN A 32 -109.08 36.90 REMARK 500 3 ALA A 38 38.55 -83.80 REMARK 500 3 LEU A 39 60.62 174.02 REMARK 500 3 GLU A 40 -160.98 -121.49 REMARK 500 3 GLU A 41 41.26 -109.44 REMARK 500 3 ARG A 58 35.24 -98.58 REMARK 500 3 LYS A 84 36.50 -167.28 REMARK 500 3 PHE A 85 39.05 -169.44 REMARK 500 4 VAL A 6 60.62 -158.00 REMARK 500 4 TYR A 8 37.10 -148.70 REMARK 500 4 VAL A 14 -48.82 164.70 REMARK 500 4 LYS A 16 -65.25 -164.79 REMARK 500 4 SER A 21 91.17 164.35 REMARK 500 REMARK 500 THIS ENTRY HAS 350 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ILE A 86 GLY A 87 2 149.18 REMARK 500 ILE A 86 GLY A 87 3 145.41 REMARK 500 GLY A 81 GLU A 82 4 -145.08 REMARK 500 GLU A 82 GLU A 83 4 -141.14 REMARK 500 ILE A 86 GLY A 87 4 147.60 REMARK 500 GLY A 9 THR A 10 5 -148.32 REMARK 500 ILE A 86 GLY A 87 5 140.40 REMARK 500 ILE A 86 GLY A 87 6 147.97 REMARK 500 GLY A 9 THR A 10 7 -147.48 REMARK 500 ILE A 86 GLY A 87 7 148.21 REMARK 500 ILE A 86 GLY A 87 8 132.22 REMARK 500 GLY A 9 THR A 10 11 -146.23 REMARK 500 GLY A 9 THR A 10 12 -149.55 REMARK 500 GLY A 9 THR A 10 13 -140.71 REMARK 500 ILE A 86 GLY A 87 13 139.93 REMARK 500 GLY A 9 THR A 10 15 -143.73 REMARK 500 ILE A 86 GLY A 87 15 142.34 REMARK 500 ILE A 86 GLY A 87 16 142.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 3 TYR A 72 0.12 SIDE CHAIN REMARK 500 4 ARG A 20 0.11 SIDE CHAIN REMARK 500 4 TYR A 72 0.07 SIDE CHAIN REMARK 500 6 ARG A 58 0.09 SIDE CHAIN REMARK 500 7 ARG A 20 0.08 SIDE CHAIN REMARK 500 7 PHE A 85 0.09 SIDE CHAIN REMARK 500 8 ARG A 58 0.15 SIDE CHAIN REMARK 500 9 ARG A 20 0.08 SIDE CHAIN REMARK 500 9 ARG A 58 0.08 SIDE CHAIN REMARK 500 11 ARG A 20 0.11 SIDE CHAIN REMARK 500 12 TYR A 72 0.08 SIDE CHAIN REMARK 500 12 PHE A 75 0.08 SIDE CHAIN REMARK 500 13 ARG A 58 0.09 SIDE CHAIN REMARK 500 14 TYR A 72 0.08 SIDE CHAIN REMARK 500 15 ARG A 20 0.11 SIDE CHAIN REMARK 500 15 TYR A 49 0.10 SIDE CHAIN REMARK 500 15 TYR A 72 0.07 SIDE CHAIN REMARK 500 17 TYR A 72 0.08 SIDE CHAIN REMARK 500 18 ARG A 58 0.08 SIDE CHAIN REMARK 500 18 TYR A 72 0.08 SIDE CHAIN REMARK 500 19 ARG A 20 0.16 SIDE CHAIN REMARK 500 19 ARG A 58 0.10 SIDE CHAIN REMARK 500 20 ARG A 58 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 282848 RELATED DB: TARGETDB DBREF 1RHX A 1 87 UNP Q9X074 Q9X074_THEMA 1 87 SEQRES 1 A 87 MET ALA LEU VAL LEU VAL LYS TYR GLY THR ASP HIS PRO SEQRES 2 A 87 VAL GLU LYS LEU LYS ILE ARG SER ALA LYS ALA GLU ASP SEQRES 3 A 87 LYS ILE VAL LEU ILE GLN ASN GLY VAL PHE TRP ALA LEU SEQRES 4 A 87 GLU GLU LEU GLU THR PRO ALA LYS VAL TYR ALA ILE LYS SEQRES 5 A 87 ASP ASP PHE LEU ALA ARG GLY TYR SER GLU GLU ASP SER SEQRES 6 A 87 LYS VAL PRO LEU ILE THR TYR SER GLU PHE ILE ASP LEU SEQRES 7 A 87 LEU GLU GLY GLU GLU LYS PHE ILE GLY HELIX 1 1 LYS A 16 SER A 21 1 6 HELIX 2 2 ASN A 33 ALA A 38 5 6 HELIX 3 3 LYS A 52 ALA A 57 1 6 HELIX 4 4 THR A 71 GLU A 80 1 10 SHEET 1 A 2 ALA A 50 ILE A 51 0 SHEET 2 A 2 LEU A 69 ILE A 70 1 O ILE A 70 N ALA A 50 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL MASTER 210 0 0 4 2 0 0 6 0 0 0 7 END