HEADER ISOMERASE 13-AUG-03 1Q6H TITLE CRYSTAL STRUCTURE OF A TRUNCATED FORM OF FKPA FROM ESCHERICHIA COLI COMPND MOL_ID: 1; COMPND 2 MOLECULE: FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PPIASE, ROTAMASE; COMPND 5 EC: 5.2.1.8; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: FKPA OR B3347; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: MC4100 DERIVATIVE; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PTFKPDCT KEYWDS CHAPERONE, PEPTIDYL-PROLYL ISOMERASE, HEAT SHOCK PROTEIN, FKBP KEYWDS 2 FAMILY, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR F.A.SAUL,J.-P.ARIE,B.VULLIEZ-LE NORMAND,R.KAHN,J.-M.BETTON, AUTHOR 2 G.A.BENTLEY REVDAT 3 13-JUL-11 1Q6H 1 VERSN REVDAT 2 24-FEB-09 1Q6H 1 VERSN REVDAT 1 13-JAN-04 1Q6H 0 JRNL AUTH F.A.SAUL,J.P.ARIE,B.VULLIEZ-LE NORMAND,R.KAHN,J.M.BETTON, JRNL AUTH 2 G.A.BENTLEY JRNL TITL STRUCTURAL AND FUNCTIONAL STUDIES OF FKPA FROM ESCHERICHIA JRNL TITL 2 COLI, A CIS/TRANS PEPTIDYL-PROLYL ISOMERASE WITH CHAPERONE JRNL TITL 3 ACTIVITY. JRNL REF J.MOL.BIOL. V. 335 595 2004 JRNL REFN ISSN 0022-2836 JRNL PMID 14672666 JRNL DOI 10.1016/J.JMB.2003.10.056 REMARK 2 REMARK 2 RESOLUTION. 1.97 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.97 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 84.4 REMARK 3 NUMBER OF REFLECTIONS : 30278 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.100 REMARK 3 FREE R VALUE TEST SET COUNT : 965 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 40 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.97 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.00 REMARK 3 REFLECTION IN BIN (WORKING SET) : 789 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.1930 REMARK 3 BIN FREE R VALUE SET COUNT : 22 REMARK 3 BIN FREE R VALUE : 0.2690 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3224 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 468 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 25.39 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 14.11 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.07000 REMARK 3 B22 (A**2) : 1.10000 REMARK 3 B33 (A**2) : -0.03000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.188 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.168 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.163 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.655 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.915 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3278 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2990 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4398 ; 1.358 ; 1.989 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7060 ; 0.676 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 418 ; 3.749 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 668 ;14.345 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 482 ; 0.079 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3630 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 578 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 741 ; 0.231 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2826 ; 0.191 ; 0.300 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 375 ; 0.183 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): 3 ; 0.039 ; 0.500 REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 18 ; 0.229 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): 48 ; 0.220 ; 0.300 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 32 ; 0.248 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2078 ; 1.025 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3316 ; 1.678 ; 3.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1200 ; 2.042 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1082 ; 3.321 ; 4.000 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 15 A 69 REMARK 3 ORIGIN FOR THE GROUP (A): -6.4939 56.1900 38.7821 REMARK 3 T TENSOR REMARK 3 T11: 0.1256 T22: 0.0923 REMARK 3 T33: 0.1299 T12: 0.0071 REMARK 3 T13: 0.0411 T23: 0.0389 REMARK 3 L TENSOR REMARK 3 L11: 2.9943 L22: 1.0198 REMARK 3 L33: 2.7060 L12: 0.9640 REMARK 3 L13: 2.4475 L23: 1.2664 REMARK 3 S TENSOR REMARK 3 S11: -0.0420 S12: 0.1859 S13: -0.0052 REMARK 3 S21: -0.0874 S22: 0.0460 S23: -0.1169 REMARK 3 S31: -0.1022 S32: 0.2253 S33: -0.0040 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 70 A 112 REMARK 3 ORIGIN FOR THE GROUP (A): -5.2819 39.8118 18.0948 REMARK 3 T TENSOR REMARK 3 T11: 0.1552 T22: 0.1218 REMARK 3 T33: 0.1551 T12: 0.0068 REMARK 3 T13: -0.0125 T23: -0.0061 REMARK 3 L TENSOR REMARK 3 L11: 14.0189 L22: 2.8832 REMARK 3 L33: 16.2720 L12: -6.1326 REMARK 3 L13: -15.2197 L23: 6.7532 REMARK 3 S TENSOR REMARK 3 S11: 0.0947 S12: 0.1232 S13: 0.1786 REMARK 3 S21: 0.0428 S22: -0.0588 S23: 0.0126 REMARK 3 S31: 0.1090 S32: -0.2545 S33: -0.0359 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 113 A 224 REMARK 3 ORIGIN FOR THE GROUP (A): 17.8972 24.7225 12.9249 REMARK 3 T TENSOR REMARK 3 T11: 0.0816 T22: 0.0263 REMARK 3 T33: 0.0758 T12: -0.0187 REMARK 3 T13: -0.0081 T23: -0.0029 REMARK 3 L TENSOR REMARK 3 L11: 2.5498 L22: 0.8898 REMARK 3 L33: 2.4147 L12: -0.4771 REMARK 3 L13: 0.2335 L23: -0.4638 REMARK 3 S TENSOR REMARK 3 S11: -0.0314 S12: -0.1342 S13: 0.0817 REMARK 3 S21: 0.1477 S22: -0.0182 S23: -0.0516 REMARK 3 S31: -0.0944 S32: 0.0718 S33: 0.0496 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 15 B 69 REMARK 3 ORIGIN FOR THE GROUP (A): -8.9520 56.4132 44.0007 REMARK 3 T TENSOR REMARK 3 T11: 0.1205 T22: 0.0330 REMARK 3 T33: 0.1572 T12: 0.0536 REMARK 3 T13: 0.0404 T23: -0.0182 REMARK 3 L TENSOR REMARK 3 L11: 2.5150 L22: 0.5825 REMARK 3 L33: 4.9677 L12: 0.6122 REMARK 3 L13: 1.5865 L23: 0.8543 REMARK 3 S TENSOR REMARK 3 S11: -0.1062 S12: 0.0827 S13: 0.0331 REMARK 3 S21: -0.0926 S22: -0.0400 S23: 0.0523 REMARK 3 S31: -0.0703 S32: -0.1920 S33: 0.1462 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 70 B 112 REMARK 3 ORIGIN FOR THE GROUP (A): -4.7732 43.9323 66.3862 REMARK 3 T TENSOR REMARK 3 T11: 0.1833 T22: 0.1236 REMARK 3 T33: 0.1761 T12: -0.0096 REMARK 3 T13: 0.0167 T23: -0.0130 REMARK 3 L TENSOR REMARK 3 L11: 10.3545 L22: 7.0525 REMARK 3 L33: 13.9525 L12: 8.7471 REMARK 3 L13: -12.2807 L23: -10.2100 REMARK 3 S TENSOR REMARK 3 S11: 0.0748 S12: -0.0982 S13: -0.2506 REMARK 3 S21: 0.1653 S22: -0.2890 S23: -0.2351 REMARK 3 S31: -0.0976 S32: 0.2114 S33: 0.2142 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 113 B 224 REMARK 3 ORIGIN FOR THE GROUP (A): -26.6761 28.0360 68.6500 REMARK 3 T TENSOR REMARK 3 T11: 0.1380 T22: 0.0254 REMARK 3 T33: 0.0966 T12: 0.0090 REMARK 3 T13: 0.0015 T23: 0.0030 REMARK 3 L TENSOR REMARK 3 L11: 3.0442 L22: 1.2328 REMARK 3 L33: 1.9569 L12: 1.0884 REMARK 3 L13: 0.0513 L23: 0.2664 REMARK 3 S TENSOR REMARK 3 S11: -0.0408 S12: 0.1999 S13: 0.1754 REMARK 3 S21: -0.2750 S22: 0.0148 S23: 0.0490 REMARK 3 S31: -0.2506 S32: -0.0412 S33: 0.0260 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1Q6H COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-AUG-03. REMARK 100 THE RCSB ID CODE IS RCSB019976. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-NOV-01 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM30A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97880 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31307 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.970 REMARK 200 RESOLUTION RANGE LOW (A) : 28.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 84.6 REMARK 200 DATA REDUNDANCY : 9.900 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : 0.05600 REMARK 200 FOR THE DATA SET : 9.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.97 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.08 REMARK 200 COMPLETENESS FOR SHELL (%) : 74.2 REMARK 200 DATA REDUNDANCY IN SHELL : 6.90 REMARK 200 R MERGE FOR SHELL (I) : 0.22300 REMARK 200 R SYM FOR SHELL (I) : 0.20600 REMARK 200 FOR SHELL : 3.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: FKPA (C-DOMAIN 95-226) REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.61 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 2000, SODIUM ACETATE, PH 4.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 18.51500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 80.37000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.61500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 80.37000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 18.51500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 42.61500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A DIMER (CHAINS A, B) REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4430 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22870 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -36.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 GLU A 2 REMARK 465 ALA A 3 REMARK 465 ALA A 4 REMARK 465 LYS A 5 REMARK 465 PRO A 6 REMARK 465 ALA A 7 REMARK 465 THR A 8 REMARK 465 ALA A 9 REMARK 465 ALA A 10 REMARK 465 ASP A 11 REMARK 465 SER A 12 REMARK 465 LYS A 13 REMARK 465 ALA A 14 REMARK 465 ALA B 1 REMARK 465 GLU B 2 REMARK 465 ALA B 3 REMARK 465 ALA B 4 REMARK 465 LYS B 5 REMARK 465 PRO B 6 REMARK 465 ALA B 7 REMARK 465 THR B 8 REMARK 465 ALA B 9 REMARK 465 ALA B 10 REMARK 465 ASP B 11 REMARK 465 SER B 12 REMARK 465 LYS B 13 REMARK 465 ALA B 14 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 74 NE2 GLN A 78 1.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 232 O HOH B 450 4556 1.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 64 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP A 98 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP B 19 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP B 95 CB - CG - OD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 ASP B 217 CB - CG - OD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 199 -116.54 -131.89 REMARK 500 ASN B 158 108.97 -169.23 REMARK 500 ALA B 199 -118.18 -133.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 376 DISTANCE = 5.65 ANGSTROMS REMARK 525 HOH A 432 DISTANCE = 5.89 ANGSTROMS REMARK 525 HOH A 457 DISTANCE = 5.07 ANGSTROMS REMARK 525 HOH A 463 DISTANCE = 5.24 ANGSTROMS REMARK 525 HOH A 464 DISTANCE = 6.44 ANGSTROMS REMARK 525 HOH B 352 DISTANCE = 5.10 ANGSTROMS REMARK 525 HOH B 409 DISTANCE = 5.73 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1Q6I RELATED DB: PDB REMARK 900 TRUNCATED FKPA FROM E. COLI: COMPLEX WITH IMMUNOSUPPRESSOR REMARK 900 FK506 REMARK 900 RELATED ID: 1Q6U RELATED DB: PDB REMARK 900 FKPA FROM E. COLI DBREF 1Q6H A 1 224 UNP P45523 FKBA_ECOLI 26 249 DBREF 1Q6H B 1 224 UNP P45523 FKBA_ECOLI 26 249 SEQADV 1Q6H MSE A 35 UNP P45523 MET 60 MODIFIED RESIDUE SEQADV 1Q6H MSE A 92 UNP P45523 MET 117 MODIFIED RESIDUE SEQADV 1Q6H MSE B 35 UNP P45523 MET 60 MODIFIED RESIDUE SEQADV 1Q6H MSE B 92 UNP P45523 MET 117 MODIFIED RESIDUE SEQRES 1 A 224 ALA GLU ALA ALA LYS PRO ALA THR ALA ALA ASP SER LYS SEQRES 2 A 224 ALA ALA PHE LYS ASN ASP ASP GLN LYS SER ALA TYR ALA SEQRES 3 A 224 LEU GLY ALA SER LEU GLY ARG TYR MSE GLU ASN SER LEU SEQRES 4 A 224 LYS GLU GLN GLU LYS LEU GLY ILE LYS LEU ASP LYS ASP SEQRES 5 A 224 GLN LEU ILE ALA GLY VAL GLN ASP ALA PHE ALA ASP LYS SEQRES 6 A 224 SER LYS LEU SER ASP GLN GLU ILE GLU GLN THR LEU GLN SEQRES 7 A 224 ALA PHE GLU ALA ARG VAL LYS SER SER ALA GLN ALA LYS SEQRES 8 A 224 MSE GLU LYS ASP ALA ALA ASP ASN GLU ALA LYS GLY LYS SEQRES 9 A 224 GLU TYR ARG GLU LYS PHE ALA LYS GLU LYS GLY VAL LYS SEQRES 10 A 224 THR SER SER THR GLY LEU VAL TYR GLN VAL VAL GLU ALA SEQRES 11 A 224 GLY LYS GLY GLU ALA PRO LYS ASP SER ASP THR VAL VAL SEQRES 12 A 224 VAL ASN TYR LYS GLY THR LEU ILE ASP GLY LYS GLU PHE SEQRES 13 A 224 ASP ASN SER TYR THR ARG GLY GLU PRO LEU SER PHE ARG SEQRES 14 A 224 LEU ASP GLY VAL ILE PRO GLY TRP THR GLU GLY LEU LYS SEQRES 15 A 224 ASN ILE LYS LYS GLY GLY LYS ILE LYS LEU VAL ILE PRO SEQRES 16 A 224 PRO GLU LEU ALA TYR GLY LYS ALA GLY VAL PRO GLY ILE SEQRES 17 A 224 PRO PRO ASN SER THR LEU VAL PHE ASP VAL GLU LEU LEU SEQRES 18 A 224 ASP VAL LYS SEQRES 1 B 224 ALA GLU ALA ALA LYS PRO ALA THR ALA ALA ASP SER LYS SEQRES 2 B 224 ALA ALA PHE LYS ASN ASP ASP GLN LYS SER ALA TYR ALA SEQRES 3 B 224 LEU GLY ALA SER LEU GLY ARG TYR MSE GLU ASN SER LEU SEQRES 4 B 224 LYS GLU GLN GLU LYS LEU GLY ILE LYS LEU ASP LYS ASP SEQRES 5 B 224 GLN LEU ILE ALA GLY VAL GLN ASP ALA PHE ALA ASP LYS SEQRES 6 B 224 SER LYS LEU SER ASP GLN GLU ILE GLU GLN THR LEU GLN SEQRES 7 B 224 ALA PHE GLU ALA ARG VAL LYS SER SER ALA GLN ALA LYS SEQRES 8 B 224 MSE GLU LYS ASP ALA ALA ASP ASN GLU ALA LYS GLY LYS SEQRES 9 B 224 GLU TYR ARG GLU LYS PHE ALA LYS GLU LYS GLY VAL LYS SEQRES 10 B 224 THR SER SER THR GLY LEU VAL TYR GLN VAL VAL GLU ALA SEQRES 11 B 224 GLY LYS GLY GLU ALA PRO LYS ASP SER ASP THR VAL VAL SEQRES 12 B 224 VAL ASN TYR LYS GLY THR LEU ILE ASP GLY LYS GLU PHE SEQRES 13 B 224 ASP ASN SER TYR THR ARG GLY GLU PRO LEU SER PHE ARG SEQRES 14 B 224 LEU ASP GLY VAL ILE PRO GLY TRP THR GLU GLY LEU LYS SEQRES 15 B 224 ASN ILE LYS LYS GLY GLY LYS ILE LYS LEU VAL ILE PRO SEQRES 16 B 224 PRO GLU LEU ALA TYR GLY LYS ALA GLY VAL PRO GLY ILE SEQRES 17 B 224 PRO PRO ASN SER THR LEU VAL PHE ASP VAL GLU LEU LEU SEQRES 18 B 224 ASP VAL LYS MODRES 1Q6H MSE A 35 MET SELENOMETHIONINE MODRES 1Q6H MSE A 92 MET SELENOMETHIONINE MODRES 1Q6H MSE B 35 MET SELENOMETHIONINE MODRES 1Q6H MSE B 92 MET SELENOMETHIONINE HET MSE A 35 12 HET MSE A 92 8 HET MSE B 35 12 HET MSE B 92 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 3 HOH *468(H2 O) HELIX 1 1 ASN A 18 LYS A 44 1 27 HELIX 2 2 ASP A 50 ALA A 63 1 14 HELIX 3 3 SER A 69 GLU A 113 1 45 HELIX 4 4 TYR A 160 GLY A 163 5 4 HELIX 5 5 ASP A 171 VAL A 173 5 3 HELIX 6 6 ILE A 174 LEU A 181 1 8 HELIX 7 7 LYS A 182 ILE A 184 5 3 HELIX 8 8 PRO A 195 ALA A 199 5 5 HELIX 9 9 ASN B 18 LYS B 44 1 27 HELIX 10 10 ASP B 50 ALA B 63 1 14 HELIX 11 11 SER B 69 GLU B 113 1 45 HELIX 12 12 TYR B 160 GLY B 163 5 4 HELIX 13 13 ASP B 171 VAL B 173 5 3 HELIX 14 14 ILE B 174 LEU B 181 1 8 HELIX 15 15 LYS B 182 ILE B 184 5 3 HELIX 16 16 PRO B 195 ALA B 199 5 5 SHEET 1 A 6 VAL A 116 THR A 118 0 SHEET 2 A 6 VAL A 124 GLU A 129 -1 O TYR A 125 N LYS A 117 SHEET 3 A 6 LYS A 189 ILE A 194 -1 O VAL A 193 N VAL A 124 SHEET 4 A 6 LEU A 214 LYS A 224 -1 O LEU A 214 N ILE A 194 SHEET 5 A 6 THR A 141 LEU A 150 -1 N THR A 141 O LYS A 224 SHEET 6 A 6 GLU A 155 ASN A 158 -1 O ASP A 157 N GLY A 148 SHEET 1 B 6 VAL A 116 THR A 118 0 SHEET 2 B 6 VAL A 124 GLU A 129 -1 O TYR A 125 N LYS A 117 SHEET 3 B 6 LYS A 189 ILE A 194 -1 O VAL A 193 N VAL A 124 SHEET 4 B 6 LEU A 214 LYS A 224 -1 O LEU A 214 N ILE A 194 SHEET 5 B 6 THR A 141 LEU A 150 -1 N THR A 141 O LYS A 224 SHEET 6 B 6 LEU A 166 ARG A 169 -1 O PHE A 168 N VAL A 142 SHEET 1 C 6 VAL B 116 THR B 118 0 SHEET 2 C 6 VAL B 124 GLU B 129 -1 O TYR B 125 N LYS B 117 SHEET 3 C 6 LYS B 189 ILE B 194 -1 O VAL B 193 N VAL B 124 SHEET 4 C 6 LEU B 214 LYS B 224 -1 O LEU B 214 N ILE B 194 SHEET 5 C 6 THR B 141 LEU B 150 -1 N THR B 141 O LYS B 224 SHEET 6 C 6 GLU B 155 ASN B 158 -1 O ASP B 157 N GLY B 148 SHEET 1 D 6 VAL B 116 THR B 118 0 SHEET 2 D 6 VAL B 124 GLU B 129 -1 O TYR B 125 N LYS B 117 SHEET 3 D 6 LYS B 189 ILE B 194 -1 O VAL B 193 N VAL B 124 SHEET 4 D 6 LEU B 214 LYS B 224 -1 O LEU B 214 N ILE B 194 SHEET 5 D 6 THR B 141 LEU B 150 -1 N THR B 141 O LYS B 224 SHEET 6 D 6 LEU B 166 ARG B 169 -1 O PHE B 168 N VAL B 142 LINK C TYR A 34 N MSE A 35 1555 1555 1.32 LINK C MSE A 35 N GLU A 36 1555 1555 1.33 LINK C LYS A 91 N MSE A 92 1555 1555 1.32 LINK C MSE A 92 N GLU A 93 1555 1555 1.33 LINK C TYR B 34 N MSE B 35 1555 1555 1.32 LINK C MSE B 35 N GLU B 36 1555 1555 1.33 LINK C LYS B 91 N MSE B 92 1555 1555 1.33 LINK C MSE B 92 N GLU B 93 1555 1555 1.32 CRYST1 37.030 85.230 160.740 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.027005 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011733 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006221 0.00000 MASTER 476 0 4 16 24 0 0 6 0 0 0 36 END