HEADER LYASE 02-JUL-03 1PX0 TITLE CRYSTAL STRUCTURE OF THE HALOALCOHOL DEHALOGENASE HHEC TITLE 2 COMPLEXED WITH THE HALOALCOHOL MIMIC (R)-1-PARA-NITRO- TITLE 3 PHENYL-2-AZIDO-ETHANOL COMPND MOL_ID: 1; COMPND 2 MOLECULE: HALOHYDRIN DEHALOGENASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AGROBACTERIUM TUMEFACIENS; SOURCE 3 ORGANISM_TAXID: 358; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PGEF KEYWDS HALOALCOHOL DEHALOGENASE, HALOHYDRIN DEHALOGENASE, KEYWDS 2 HALOHYDRIN HYDROGEN-HALIDE LYASE, SDR FAMILY, SHORT-CHAIN KEYWDS 3 DEHYDROGENASE/REDUCTASE, ROSSMANN FOLD EXPDTA X-RAY DIFFRACTION AUTHOR R.M.DE JONG,J.J.W.TIESINGA,H.J.ROZEBOOM,K.H.KALK,L.TANG, AUTHOR 2 D.B.JANSSEN,B.W.DIJKSTRA REVDAT 2 24-FEB-09 1PX0 1 VERSN REVDAT 1 07-OCT-03 1PX0 0 JRNL AUTH R.M.DE JONG,J.J.W.TIESINGA,H.J.ROZEBOOM,K.H.KALK, JRNL AUTH 2 L.TANG,D.B.JANSSEN,B.W.DIJKSTRA JRNL TITL STRUCTURE AND MECHANISM OF A BACTERIAL HALOALCOHOL JRNL TITL 2 DEHALOGENASE: A NEW VARIATION OF THE SHORT-CHAIN JRNL TITL 3 DEHYDROGENASE/REDUCTASE FOLD WITHOUT AN NAD(P)H JRNL TITL 4 BINDING SITE JRNL REF EMBO J. V. 22 4933 2003 JRNL REFN ISSN 0261-4189 JRNL PMID 14517233 JRNL DOI 10.1093/EMBOJ/CDG479 REMARK 1 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNX, CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.97 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 2847900.290 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 78666 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.207 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.800 REMARK 3 FREE R VALUE TEST SET COUNT : 4547 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.003 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.02 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.50 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 11747 REMARK 3 BIN R VALUE (WORKING SET) : 0.1860 REMARK 3 BIN FREE R VALUE : 0.2150 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.80 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 719 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.008 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7668 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 60 REMARK 3 SOLVENT ATOMS : 904 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 8.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.11000 REMARK 3 B22 (A**2) : -0.20000 REMARK 3 B33 (A**2) : -0.92000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.48000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.23 REMARK 3 ESD FROM SIGMAA (A) : 0.07 REMARK 3 LOW RESOLUTION CUTOFF (A) : 6.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.22 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.11 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.50 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.00 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.97 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.030 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.400 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.640 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.270 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.39 REMARK 3 BSOL : 51.80 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : DNA-RNA_REP.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : RNSAA2.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : DNA-RNA.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : ION.TOP REMARK 3 TOPOLOGY FILE 5 : RNSAA2.TOP REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1PX0 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-JUL-03. REMARK 100 THE RCSB ID CODE IS RCSB019654. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-MAR-02 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.934 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 78669 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : 0.05600 REMARK 200 R SYM (I) : 0.04900 REMARK 200 FOR THE DATA SET : 23.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.18500 REMARK 200 R SYM FOR SHELL (I) : 0.21700 REMARK 200 FOR SHELL : 5.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1PWX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.21 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE, BIS-TRIS BUFFER, REMARK 280 PH 6.9, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 73.35150 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.92150 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 73.35150 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 35.92150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE SECOND PART OF THE TETRAMERIC BIOLOGICAL ASSEMBLY IS REMARK 300 GENERATED BY THE TWO FOLD AXIS REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 19020 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30730 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -112.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 254 REMARK 465 MET B 1 REMARK 465 GLU B 254 REMARK 465 MET C 1 REMARK 465 GLU C 254 REMARK 465 MET D 1 REMARK 465 GLU D 254 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 23 CG CD OE1 OE2 REMARK 470 GLU A 33 CG CD OE1 OE2 REMARK 470 LYS A 36 CG CD CE NZ REMARK 470 LYS A 38 CG CD CE NZ REMARK 470 ASP A 39 CG OD1 OD2 REMARK 470 GLU A 46 CG CD OE1 OE2 REMARK 470 GLU A 61 CG CD OE1 OE2 REMARK 470 GLU A 64 CG CD OE1 OE2 REMARK 470 GLU A 95 CG CD OE1 OE2 REMARK 470 LYS A 215 CG CD CE NZ REMARK 470 GLU B 33 CG CD OE1 OE2 REMARK 470 LYS B 38 CG CD CE NZ REMARK 470 ASP B 39 CG OD1 OD2 REMARK 470 GLU B 46 CG CD OE1 OE2 REMARK 470 GLU B 64 CG CD OE1 OE2 REMARK 470 GLU B 95 CG CD OE1 OE2 REMARK 470 LYS B 121 CG CD CE NZ REMARK 470 LYS B 203 CG CD CE NZ REMARK 470 LYS B 215 CG CD CE NZ REMARK 470 GLU C 33 CG CD OE1 OE2 REMARK 470 LYS C 36 CG CD CE NZ REMARK 470 LYS C 38 CG CD CE NZ REMARK 470 ASP C 39 CG OD1 OD2 REMARK 470 GLU C 46 CG CD OE1 OE2 REMARK 470 GLU C 64 CG CD OE1 OE2 REMARK 470 GLU C 95 CG CD OE1 OE2 REMARK 470 LYS C 121 CG CD CE NZ REMARK 470 GLU C 165 CG CD OE1 OE2 REMARK 470 LYS C 203 CG CD CE NZ REMARK 470 GLU D 23 CG CD OE1 OE2 REMARK 470 GLU D 33 CG CD OE1 OE2 REMARK 470 LYS D 38 CG CD CE NZ REMARK 470 ASP D 39 CG OD1 OD2 REMARK 470 GLU D 46 CG CD OE1 OE2 REMARK 470 GLU D 64 CG CD OE1 OE2 REMARK 470 GLU D 95 CG CD OE1 OE2 REMARK 470 GLU D 165 CG CD OE1 OE2 REMARK 470 LYS D 215 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N TRP B 238 OE1 GLN C 235 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 12 -125.28 52.64 REMARK 500 THR A 131 -110.67 -108.70 REMARK 500 LEU A 142 41.08 -142.89 REMARK 500 GLU A 181 -112.90 57.59 REMARK 500 PHE A 186 -62.88 91.09 REMARK 500 CYS A 229 62.03 -152.05 REMARK 500 ASN B 8 47.12 36.61 REMARK 500 PHE B 12 -119.84 50.07 REMARK 500 THR B 131 -113.15 -108.58 REMARK 500 LEU B 142 36.20 -140.24 REMARK 500 GLU B 181 -108.09 56.84 REMARK 500 TYR B 185 85.79 -68.37 REMARK 500 PHE B 186 -56.68 85.58 REMARK 500 CYS B 229 56.29 -146.63 REMARK 500 PHE C 12 -123.81 48.90 REMARK 500 GLN C 105 -51.61 -123.33 REMARK 500 THR C 131 -113.68 -109.20 REMARK 500 GLU C 181 -109.80 56.90 REMARK 500 TYR C 185 85.68 -68.10 REMARK 500 PHE C 186 -56.87 87.42 REMARK 500 CYS C 229 59.09 -151.68 REMARK 500 PHE D 12 -122.77 56.48 REMARK 500 ASP D 32 144.14 -171.87 REMARK 500 GLN D 105 -53.10 -123.21 REMARK 500 SER D 124 144.49 -170.91 REMARK 500 THR D 131 -107.96 -110.30 REMARK 500 GLU D 181 -109.72 58.73 REMARK 500 PHE D 186 -56.75 88.49 REMARK 500 CYS D 229 57.32 -150.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR C 185 0.06 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH C1004 DISTANCE = 7.43 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE RPN A 1001 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE RPN B 1002 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE RPN C 1003 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE RPN D 1004 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1PWX RELATED DB: PDB REMARK 900 HALOALCOHOL DEHALOGENASE HHEC COMPLEXED WITH BROMIDE REMARK 900 RELATED ID: 1PWZ RELATED DB: PDB REMARK 900 HALOALCOHOL DEHALOGENASE HHEC COMPLEXED WITH (R)-STYRENE REMARK 900 OXIDE AND CHLORIDE DBREF 1PX0 A 1 254 UNP Q93D82 Q93D82_9RHIZ 1 254 DBREF 1PX0 B 1 254 UNP Q93D82 Q93D82_9RHIZ 1 254 DBREF 1PX0 C 1 254 UNP Q93D82 Q93D82_9RHIZ 1 254 DBREF 1PX0 D 1 254 UNP Q93D82 Q93D82_9RHIZ 1 254 SEQRES 1 A 254 MET SER THR ALA ILE VAL THR ASN VAL LYS HIS PHE GLY SEQRES 2 A 254 GLY MET GLY SER ALA LEU ARG LEU SER GLU ALA GLY HIS SEQRES 3 A 254 THR VAL ALA CYS HIS ASP GLU SER PHE LYS GLN LYS ASP SEQRES 4 A 254 GLU LEU GLU ALA PHE ALA GLU THR TYR PRO GLN LEU LYS SEQRES 5 A 254 PRO MET SER GLU GLN GLU PRO ALA GLU LEU ILE GLU ALA SEQRES 6 A 254 VAL THR SER ALA TYR GLY GLN VAL ASP VAL LEU VAL SER SEQRES 7 A 254 ASN ASP ILE PHE ALA PRO GLU PHE GLN PRO ILE ASP LYS SEQRES 8 A 254 TYR ALA VAL GLU ASP TYR ARG GLY ALA VAL GLU ALA LEU SEQRES 9 A 254 GLN ILE ARG PRO PHE ALA LEU VAL ASN ALA VAL ALA SER SEQRES 10 A 254 GLN MET LYS LYS ARG LYS SER GLY HIS ILE ILE PHE ILE SEQRES 11 A 254 THR SER ALA THR PRO PHE GLY PRO TRP LYS GLU LEU SER SEQRES 12 A 254 THR TYR THR SER ALA ARG ALA GLY ALA CYS THR LEU ALA SEQRES 13 A 254 ASN ALA LEU SER LYS GLU LEU GLY GLU TYR ASN ILE PRO SEQRES 14 A 254 VAL PHE ALA ILE GLY PRO ASN TYR LEU HIS SER GLU ASP SEQRES 15 A 254 SER PRO TYR PHE TYR PRO THR GLU PRO TRP LYS THR ASN SEQRES 16 A 254 PRO GLU HIS VAL ALA HIS VAL LYS LYS VAL THR ALA LEU SEQRES 17 A 254 GLN ARG LEU GLY THR GLN LYS GLU LEU GLY GLU LEU VAL SEQRES 18 A 254 ALA PHE LEU ALA SER GLY SER CYS ASP TYR LEU THR GLY SEQRES 19 A 254 GLN VAL PHE TRP LEU ALA GLY GLY PHE PRO MET ILE GLU SEQRES 20 A 254 ARG TRP PRO GLY MET PRO GLU SEQRES 1 B 254 MET SER THR ALA ILE VAL THR ASN VAL LYS HIS PHE GLY SEQRES 2 B 254 GLY MET GLY SER ALA LEU ARG LEU SER GLU ALA GLY HIS SEQRES 3 B 254 THR VAL ALA CYS HIS ASP GLU SER PHE LYS GLN LYS ASP SEQRES 4 B 254 GLU LEU GLU ALA PHE ALA GLU THR TYR PRO GLN LEU LYS SEQRES 5 B 254 PRO MET SER GLU GLN GLU PRO ALA GLU LEU ILE GLU ALA SEQRES 6 B 254 VAL THR SER ALA TYR GLY GLN VAL ASP VAL LEU VAL SER SEQRES 7 B 254 ASN ASP ILE PHE ALA PRO GLU PHE GLN PRO ILE ASP LYS SEQRES 8 B 254 TYR ALA VAL GLU ASP TYR ARG GLY ALA VAL GLU ALA LEU SEQRES 9 B 254 GLN ILE ARG PRO PHE ALA LEU VAL ASN ALA VAL ALA SER SEQRES 10 B 254 GLN MET LYS LYS ARG LYS SER GLY HIS ILE ILE PHE ILE SEQRES 11 B 254 THR SER ALA THR PRO PHE GLY PRO TRP LYS GLU LEU SER SEQRES 12 B 254 THR TYR THR SER ALA ARG ALA GLY ALA CYS THR LEU ALA SEQRES 13 B 254 ASN ALA LEU SER LYS GLU LEU GLY GLU TYR ASN ILE PRO SEQRES 14 B 254 VAL PHE ALA ILE GLY PRO ASN TYR LEU HIS SER GLU ASP SEQRES 15 B 254 SER PRO TYR PHE TYR PRO THR GLU PRO TRP LYS THR ASN SEQRES 16 B 254 PRO GLU HIS VAL ALA HIS VAL LYS LYS VAL THR ALA LEU SEQRES 17 B 254 GLN ARG LEU GLY THR GLN LYS GLU LEU GLY GLU LEU VAL SEQRES 18 B 254 ALA PHE LEU ALA SER GLY SER CYS ASP TYR LEU THR GLY SEQRES 19 B 254 GLN VAL PHE TRP LEU ALA GLY GLY PHE PRO MET ILE GLU SEQRES 20 B 254 ARG TRP PRO GLY MET PRO GLU SEQRES 1 C 254 MET SER THR ALA ILE VAL THR ASN VAL LYS HIS PHE GLY SEQRES 2 C 254 GLY MET GLY SER ALA LEU ARG LEU SER GLU ALA GLY HIS SEQRES 3 C 254 THR VAL ALA CYS HIS ASP GLU SER PHE LYS GLN LYS ASP SEQRES 4 C 254 GLU LEU GLU ALA PHE ALA GLU THR TYR PRO GLN LEU LYS SEQRES 5 C 254 PRO MET SER GLU GLN GLU PRO ALA GLU LEU ILE GLU ALA SEQRES 6 C 254 VAL THR SER ALA TYR GLY GLN VAL ASP VAL LEU VAL SER SEQRES 7 C 254 ASN ASP ILE PHE ALA PRO GLU PHE GLN PRO ILE ASP LYS SEQRES 8 C 254 TYR ALA VAL GLU ASP TYR ARG GLY ALA VAL GLU ALA LEU SEQRES 9 C 254 GLN ILE ARG PRO PHE ALA LEU VAL ASN ALA VAL ALA SER SEQRES 10 C 254 GLN MET LYS LYS ARG LYS SER GLY HIS ILE ILE PHE ILE SEQRES 11 C 254 THR SER ALA THR PRO PHE GLY PRO TRP LYS GLU LEU SER SEQRES 12 C 254 THR TYR THR SER ALA ARG ALA GLY ALA CYS THR LEU ALA SEQRES 13 C 254 ASN ALA LEU SER LYS GLU LEU GLY GLU TYR ASN ILE PRO SEQRES 14 C 254 VAL PHE ALA ILE GLY PRO ASN TYR LEU HIS SER GLU ASP SEQRES 15 C 254 SER PRO TYR PHE TYR PRO THR GLU PRO TRP LYS THR ASN SEQRES 16 C 254 PRO GLU HIS VAL ALA HIS VAL LYS LYS VAL THR ALA LEU SEQRES 17 C 254 GLN ARG LEU GLY THR GLN LYS GLU LEU GLY GLU LEU VAL SEQRES 18 C 254 ALA PHE LEU ALA SER GLY SER CYS ASP TYR LEU THR GLY SEQRES 19 C 254 GLN VAL PHE TRP LEU ALA GLY GLY PHE PRO MET ILE GLU SEQRES 20 C 254 ARG TRP PRO GLY MET PRO GLU SEQRES 1 D 254 MET SER THR ALA ILE VAL THR ASN VAL LYS HIS PHE GLY SEQRES 2 D 254 GLY MET GLY SER ALA LEU ARG LEU SER GLU ALA GLY HIS SEQRES 3 D 254 THR VAL ALA CYS HIS ASP GLU SER PHE LYS GLN LYS ASP SEQRES 4 D 254 GLU LEU GLU ALA PHE ALA GLU THR TYR PRO GLN LEU LYS SEQRES 5 D 254 PRO MET SER GLU GLN GLU PRO ALA GLU LEU ILE GLU ALA SEQRES 6 D 254 VAL THR SER ALA TYR GLY GLN VAL ASP VAL LEU VAL SER SEQRES 7 D 254 ASN ASP ILE PHE ALA PRO GLU PHE GLN PRO ILE ASP LYS SEQRES 8 D 254 TYR ALA VAL GLU ASP TYR ARG GLY ALA VAL GLU ALA LEU SEQRES 9 D 254 GLN ILE ARG PRO PHE ALA LEU VAL ASN ALA VAL ALA SER SEQRES 10 D 254 GLN MET LYS LYS ARG LYS SER GLY HIS ILE ILE PHE ILE SEQRES 11 D 254 THR SER ALA THR PRO PHE GLY PRO TRP LYS GLU LEU SER SEQRES 12 D 254 THR TYR THR SER ALA ARG ALA GLY ALA CYS THR LEU ALA SEQRES 13 D 254 ASN ALA LEU SER LYS GLU LEU GLY GLU TYR ASN ILE PRO SEQRES 14 D 254 VAL PHE ALA ILE GLY PRO ASN TYR LEU HIS SER GLU ASP SEQRES 15 D 254 SER PRO TYR PHE TYR PRO THR GLU PRO TRP LYS THR ASN SEQRES 16 D 254 PRO GLU HIS VAL ALA HIS VAL LYS LYS VAL THR ALA LEU SEQRES 17 D 254 GLN ARG LEU GLY THR GLN LYS GLU LEU GLY GLU LEU VAL SEQRES 18 D 254 ALA PHE LEU ALA SER GLY SER CYS ASP TYR LEU THR GLY SEQRES 19 D 254 GLN VAL PHE TRP LEU ALA GLY GLY PHE PRO MET ILE GLU SEQRES 20 D 254 ARG TRP PRO GLY MET PRO GLU HET RPN A1001 15 HET RPN B1002 15 HET RPN C1003 15 HET RPN D1004 15 HETNAM RPN (R)-1-PARA-NITRO-PHENYL-2-AZIDO-ETHANOL FORMUL 5 RPN 4(C8 H8 N4 O3) FORMUL 9 HOH *902(H2 O) HELIX 1 1 GLY A 13 ALA A 24 1 12 HELIX 2 2 ASP A 32 LYS A 36 5 5 HELIX 3 3 GLN A 37 TYR A 48 1 12 HELIX 4 4 GLU A 58 GLY A 71 1 14 HELIX 5 5 ALA A 93 GLN A 105 1 13 HELIX 6 6 GLN A 105 LYS A 123 1 19 HELIX 7 7 ALA A 133 GLY A 137 5 5 HELIX 8 8 LEU A 142 GLY A 164 1 23 HELIX 9 9 GLU A 165 ASN A 167 5 3 HELIX 10 10 PRO A 188 LYS A 193 1 6 HELIX 11 11 ASN A 195 THR A 206 1 12 HELIX 12 12 THR A 213 SER A 226 1 14 HELIX 13 13 CYS A 229 THR A 233 5 5 HELIX 14 14 GLY B 13 ALA B 24 1 12 HELIX 15 15 ASP B 32 LYS B 36 5 5 HELIX 16 16 GLN B 37 TYR B 48 1 12 HELIX 17 17 GLU B 58 GLY B 71 1 14 HELIX 18 18 PRO B 88 TYR B 92 5 5 HELIX 19 19 ALA B 93 GLN B 105 1 13 HELIX 20 20 GLN B 105 LYS B 123 1 19 HELIX 21 21 ALA B 133 GLY B 137 5 5 HELIX 22 22 LEU B 142 GLY B 164 1 23 HELIX 23 23 GLU B 165 ASN B 167 5 3 HELIX 24 24 PRO B 188 LYS B 193 1 6 HELIX 25 25 ASN B 195 THR B 206 1 12 HELIX 26 26 THR B 213 SER B 226 1 14 HELIX 27 27 CYS B 229 THR B 233 5 5 HELIX 28 28 GLY C 13 ALA C 24 1 12 HELIX 29 29 ASP C 32 LYS C 36 5 5 HELIX 30 30 GLN C 37 TYR C 48 1 12 HELIX 31 31 GLU C 58 GLY C 71 1 14 HELIX 32 32 ALA C 93 GLN C 105 1 13 HELIX 33 33 GLN C 105 LYS C 123 1 19 HELIX 34 34 ALA C 133 GLY C 137 5 5 HELIX 35 35 LEU C 142 GLY C 164 1 23 HELIX 36 36 GLU C 165 ASN C 167 5 3 HELIX 37 37 PRO C 188 LYS C 193 1 6 HELIX 38 38 ASN C 195 THR C 206 1 12 HELIX 39 39 THR C 213 SER C 226 1 14 HELIX 40 40 CYS C 229 THR C 233 5 5 HELIX 41 41 GLY D 13 ALA D 24 1 12 HELIX 42 42 ASP D 32 LYS D 36 5 5 HELIX 43 43 GLN D 37 TYR D 48 1 12 HELIX 44 44 GLU D 58 GLY D 71 1 14 HELIX 45 45 PRO D 88 TYR D 92 5 5 HELIX 46 46 ALA D 93 GLN D 105 1 13 HELIX 47 47 GLN D 105 LYS D 123 1 19 HELIX 48 48 ALA D 133 GLY D 137 5 5 HELIX 49 49 LEU D 142 GLY D 164 1 23 HELIX 50 50 GLU D 165 ASN D 167 5 3 HELIX 51 51 PRO D 188 LYS D 193 1 6 HELIX 52 52 ASN D 195 THR D 206 1 12 HELIX 53 53 THR D 213 SER D 226 1 14 HELIX 54 54 CYS D 229 THR D 233 5 5 SHEET 1 A 7 LYS A 52 PRO A 53 0 SHEET 2 A 7 THR A 27 CYS A 30 1 N CYS A 30 O LYS A 52 SHEET 3 A 7 THR A 3 VAL A 6 1 N ALA A 4 O THR A 27 SHEET 4 A 7 VAL A 75 ASN A 79 1 O VAL A 77 N ILE A 5 SHEET 5 A 7 HIS A 126 ILE A 130 1 O ILE A 128 N LEU A 76 SHEET 6 A 7 VAL A 170 PRO A 175 1 O ILE A 173 N PHE A 129 SHEET 7 A 7 VAL A 236 LEU A 239 1 O PHE A 237 N GLY A 174 SHEET 1 B 7 LEU B 51 PRO B 53 0 SHEET 2 B 7 THR B 27 CYS B 30 1 N VAL B 28 O LYS B 52 SHEET 3 B 7 THR B 3 VAL B 6 1 N ALA B 4 O THR B 27 SHEET 4 B 7 VAL B 75 ASN B 79 1 O VAL B 77 N ILE B 5 SHEET 5 B 7 HIS B 126 ILE B 130 1 O ILE B 128 N LEU B 76 SHEET 6 B 7 VAL B 170 PRO B 175 1 O ILE B 173 N PHE B 129 SHEET 7 B 7 VAL B 236 LEU B 239 1 O PHE B 237 N GLY B 174 SHEET 1 C 7 LYS C 52 PRO C 53 0 SHEET 2 C 7 THR C 27 CYS C 30 1 N CYS C 30 O LYS C 52 SHEET 3 C 7 THR C 3 VAL C 6 1 N ALA C 4 O THR C 27 SHEET 4 C 7 VAL C 75 ASN C 79 1 O VAL C 77 N ILE C 5 SHEET 5 C 7 HIS C 126 ILE C 130 1 O ILE C 130 N SER C 78 SHEET 6 C 7 VAL C 170 PRO C 175 1 O ILE C 173 N PHE C 129 SHEET 7 C 7 VAL C 236 LEU C 239 1 O PHE C 237 N GLY C 174 SHEET 1 D 7 LYS D 52 PRO D 53 0 SHEET 2 D 7 THR D 27 CYS D 30 1 N CYS D 30 O LYS D 52 SHEET 3 D 7 THR D 3 VAL D 6 1 N ALA D 4 O THR D 27 SHEET 4 D 7 VAL D 75 ASN D 79 1 O VAL D 77 N ILE D 5 SHEET 5 D 7 HIS D 126 ILE D 130 1 O ILE D 128 N LEU D 76 SHEET 6 D 7 VAL D 170 PRO D 175 1 O ILE D 173 N PHE D 129 SHEET 7 D 7 VAL D 236 LEU D 239 1 O PHE D 237 N GLY D 174 CISPEP 1 GLU A 190 PRO A 191 0 1.61 CISPEP 2 PHE A 243 PRO A 244 0 0.18 CISPEP 3 GLU B 190 PRO B 191 0 0.78 CISPEP 4 PHE B 243 PRO B 244 0 0.14 CISPEP 5 GLU C 190 PRO C 191 0 0.26 CISPEP 6 PHE C 243 PRO C 244 0 0.85 CISPEP 7 GLU D 190 PRO D 191 0 0.06 CISPEP 8 PHE D 243 PRO D 244 0 0.62 SITE 1 AC1 12 PHE A 86 SER A 132 TRP A 139 TYR A 145 SITE 2 AC1 12 ASN A 176 TYR A 177 LEU A 178 PHE A 186 SITE 3 AC1 12 TYR A 187 HOH A1019 HOH A1194 TRP C 249 SITE 1 AC2 12 PHE B 12 PRO B 84 PHE B 86 SER B 132 SITE 2 AC2 12 TRP B 139 TYR B 145 ASN B 176 LEU B 178 SITE 3 AC2 12 PHE B 186 TYR B 187 HOH B1028 TRP D 249 SITE 1 AC3 13 TRP A 249 PHE C 12 PRO C 84 PHE C 86 SITE 2 AC3 13 SER C 132 TRP C 139 TYR C 145 PRO C 175 SITE 3 AC3 13 ASN C 176 TYR C 177 LEU C 178 PHE C 186 SITE 4 AC3 13 TYR C 187 SITE 1 AC4 12 TRP B 249 PHE D 12 PHE D 86 SER D 132 SITE 2 AC4 12 THR D 134 TRP D 139 TYR D 145 ASN D 176 SITE 3 AC4 12 TYR D 177 LEU D 178 PHE D 186 TYR D 187 CRYST1 146.703 71.843 97.310 90.00 92.82 90.00 C 1 2 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006816 0.000000 0.000336 0.00000 SCALE2 0.000000 0.013919 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010289 0.00000 MASTER 391 0 4 54 28 0 13 6 0 0 0 80 END