HEADER OXIDOREDUCTASE 14-APR-03 1P1V TITLE CRYSTAL STRUCTURE OF FALS-ASSOCIATED HUMAN COPPER-ZINC SUPEROXIDE TITLE 2 DISMUTASE (CUZNSOD) MUTANT D125H TO 1.4A COMPND MOL_ID: 1; COMPND 2 MOLECULE: SUPEROXIDE DISMUTASE [CU-ZN]; COMPND 3 CHAIN: A, B, C; COMPND 4 EC: 1.15.1.1; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SOD1; SOURCE 6 EXPRESSION_SYSTEM: SACCHAROMYCES CEREVISIAE; SOURCE 7 EXPRESSION_SYSTEM_COMMON: BAKER'S YEAST; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 4932; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: EG118; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: YEP351 KEYWDS BETA-BARREL, BOUND ANION AT COPPER SITE, CUZNSOD PEROXIDATION KEYWDS 2 MECHANISM, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR J.S.ELAM,K.MALEK,J.A.RODRIGUEZ,P.A.DOUCETTE,A.B.TAYLOR,L.J.HAYWARD, AUTHOR 2 D.E.CABELLI,J.S.VALENTINE,P.J.HART REVDAT 3 27-OCT-21 1P1V 1 REMARK SEQADV LINK REVDAT 2 24-FEB-09 1P1V 1 VERSN REVDAT 1 26-AUG-03 1P1V 0 JRNL AUTH J.S.ELAM,K.MALEK,J.A.RODRIGUEZ,P.A.DOUCETTE,A.B.TAYLOR, JRNL AUTH 2 L.J.HAYWARD,D.E.CABELLI,J.S.VALENTINE,P.J.HART JRNL TITL AN ALTERNATIVE MECHANISM OF BICARBONATE-MEDIATED JRNL TITL 2 PEROXIDATION BY COPPER-ZINC SUPEROXIDE DISMUTASE: RATES JRNL TITL 3 ENHANCED VIA PROPOSED ENZYME-ASSOCIATED PEROXYCARBONATE JRNL TITL 4 INTERMEDIATE JRNL REF J.BIOL.CHEM. V. 278 21032 2003 JRNL REFN ISSN 0021-9258 JRNL PMID 12649272 JRNL DOI 10.1074/JBC.M300484200 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : SHELXL-97 REMARK 3 AUTHORS : G.M.SHELDRICK REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.9 REMARK 3 CROSS-VALIDATION METHOD : FREE R REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (NO CUTOFF). REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : 0.147 REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : 0.146 REMARK 3 FREE R VALUE (NO CUTOFF) : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : 2899 REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 94875 REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL FOR DATA WITH F>4SIG(F). REMARK 3 R VALUE (WORKING + TEST SET, F>4SIG(F)) : 0.133 REMARK 3 R VALUE (WORKING SET, F>4SIG(F)) : NULL REMARK 3 FREE R VALUE (F>4SIG(F)) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, F>4SIG(F)) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (F>4SIG(F)) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (F>4SIG(F)) : 78424 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3180 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 21 REMARK 3 SOLVENT ATOMS : 736 REMARK 3 REMARK 3 MODEL REFINEMENT. REMARK 3 OCCUPANCY SUM OF NON-HYDROGEN ATOMS : 3936.0 REMARK 3 OCCUPANCY SUM OF HYDROGEN ATOMS : 0.00 REMARK 3 NUMBER OF DISCRETELY DISORDERED RESIDUES : 0 REMARK 3 NUMBER OF LEAST-SQUARES PARAMETERS : 35428 REMARK 3 NUMBER OF RESTRAINTS : 41292 REMARK 3 REMARK 3 RMS DEVIATIONS FROM RESTRAINT TARGET VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 ANGLE DISTANCES (A) : 0.028 REMARK 3 SIMILAR DISTANCES (NO TARGET VALUES) (A) : 0.000 REMARK 3 DISTANCES FROM RESTRAINT PLANES (A) : 0.030 REMARK 3 ZERO CHIRAL VOLUMES (A**3) : 0.055 REMARK 3 NON-ZERO CHIRAL VOLUMES (A**3) : 0.071 REMARK 3 ANTI-BUMPING DISTANCE RESTRAINTS (A) : 0.015 REMARK 3 RIGID-BOND ADP COMPONENTS (A**2) : 0.004 REMARK 3 SIMILAR ADP COMPONENTS (A**2) : 0.053 REMARK 3 APPROXIMATELY ISOTROPIC ADPS (A**2) : 0.083 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED: NULL REMARK 3 REMARK 3 STEREOCHEMISTRY TARGET VALUES : ENGH AND HUBER REMARK 3 SPECIAL CASE: NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: ANISOTROPIC REFINEMENT REDUCED FREE R REMARK 3 (NO CUTOFF) BY 4.1% REMARK 4 REMARK 4 1P1V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-APR-03. REMARK 100 THE DEPOSITION ID IS D_1000018909. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-JUN-01; 07-JUN-01 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : NSLS; NSLS REMARK 200 BEAMLINE : X12B; X8C REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000; 1.2811 REMARK 200 MONOCHROMATOR : MIRRORS; MIRRORS REMARK 200 OPTICS : MIRRORS; MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4; ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 95234 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.7 REMARK 200 DATA REDUNDANCY : 6.910 REMARK 200 R MERGE (I) : 0.04800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 30.1600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.45 REMARK 200 COMPLETENESS FOR SHELL (%) : 85.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.42600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.620 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: ZINC SULFATE, PEG MME 550, MES, PH REMARK 280 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 278K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 71.54000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 71.54000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 35.22450 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 50.57000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 35.22450 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 50.57000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 71.54000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 35.22450 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 50.57000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 71.54000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 35.22450 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 50.57000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A HOMODIMER. IN THE ASYMMETRIC REMARK 300 UNIT WE HAVE ONE HOMODIMER AND ONE MONOMER. THE MONOMER'S DIMERIC REMARK 300 PARTNER IS GENERATED THROUGH A CRYSTALLOGRAPHIC TWO FOLD AXIS AT REMARK 300 THE DIMER INTERFACE. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2030 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13100 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -129.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -70.44900 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 71.54000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1057 LIES ON A SPECIAL POSITION. REMARK 375 HOH C1086 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 129 REMARK 465 GLY A 130 REMARK 465 ASN A 131 REMARK 465 GLU A 132 REMARK 465 GLU A 133 REMARK 465 SER A 134 REMARK 465 THR A 135 REMARK 465 LYS B 128 REMARK 465 GLY B 129 REMARK 465 GLY B 130 REMARK 465 ASN B 131 REMARK 465 GLU B 132 REMARK 465 GLU B 133 REMARK 465 SER B 134 REMARK 465 THR B 135 REMARK 465 LYS B 136 REMARK 465 GLY C 129 REMARK 465 GLY C 130 REMARK 465 ASN C 131 REMARK 465 GLU C 132 REMARK 465 GLU C 133 REMARK 465 SER C 134 REMARK 465 THR C 135 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 79 NE - CZ - NH1 ANGL. DEV. = -3.1 DEGREES REMARK 500 ASP B 83 CB - CG - OD1 ANGL. DEV. = 8.5 DEGREES REMARK 500 ASP B 96 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 ARG B 115 NE - CZ - NH2 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG C 69 CD - NE - CZ ANGL. DEV. = 9.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 65 59.98 -147.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 46 ND1 REMARK 620 2 HIS A 48 NE2 119.8 REMARK 620 3 HIS A 120 NE2 101.3 125.2 REMARK 620 4 SO4 A 801 O1 102.9 100.4 104.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 202 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 63 ND1 REMARK 620 2 HIS A 71 ND1 102.2 REMARK 620 3 HIS A 80 ND1 107.9 123.2 REMARK 620 4 ASP A 83 OD1 105.2 98.1 118.0 REMARK 620 5 ASP A 83 OD2 157.1 79.8 89.1 52.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 203 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 46 ND1 REMARK 620 2 HIS B 48 NE2 113.9 REMARK 620 3 HIS B 120 NE2 98.9 125.9 REMARK 620 4 SO4 B 802 O2 98.8 105.6 110.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 204 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 63 ND1 REMARK 620 2 HIS B 71 ND1 104.1 REMARK 620 3 HIS B 80 ND1 99.3 122.8 REMARK 620 4 ASP B 83 OD1 109.8 97.5 122.2 REMARK 620 5 ASP B 83 OD2 163.2 78.6 92.8 53.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 205 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 46 ND1 REMARK 620 2 HIS C 48 NE2 119.3 REMARK 620 3 HIS C 120 NE2 100.4 125.6 REMARK 620 4 SO4 C 803 O1 102.3 102.0 104.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 206 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 63 ND1 REMARK 620 2 HIS C 71 ND1 105.7 REMARK 620 3 HIS C 80 ND1 107.7 122.3 REMARK 620 4 ASP C 83 OD1 104.2 99.4 115.8 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 803 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 206 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1AZV RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF FALS-ASSOCIATED COPPER-ZINC SUPEROXIDE REMARK 900 DISMUTASE (CUZNSOD) MUTANT G37R REMARK 900 RELATED ID: 1OZU RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF FALS-ASSOCIATED COPPER-ZINC SUPEROXIDE REMARK 900 DISMUTASE (CUZNSOD) MUTANT S134N REMARK 900 RELATED ID: 1OZT RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF FALS-ASSOCIATED COPPER-ZINC SUPEROXIDE REMARK 900 DISMUTASE (CUZNSOD) MUTANT APO-H46R REMARK 900 RELATED ID: 1OEZ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF FALS-ASSOCIATED COPPER-ZINC SUPEROXIDE REMARK 900 DISMUTASE (CUZNSOD) MUTANT ZN-LOADED H46R DBREF 1P1V A 1 153 UNP P00441 SODC_HUMAN 1 153 DBREF 1P1V B 1 153 UNP P00441 SODC_HUMAN 1 153 DBREF 1P1V C 1 153 UNP P00441 SODC_HUMAN 1 153 SEQADV 1P1V CSX A 111 UNP P00441 CYS 111 MODIFIED RESIDUE SEQADV 1P1V HIS A 125 UNP P00441 ASP 125 ENGINEERED MUTATION SEQADV 1P1V CSX B 111 UNP P00441 CYS 111 MODIFIED RESIDUE SEQADV 1P1V HIS B 125 UNP P00441 ASP 125 ENGINEERED MUTATION SEQADV 1P1V CSX C 111 UNP P00441 CYS 111 MODIFIED RESIDUE SEQADV 1P1V HIS C 125 UNP P00441 ASP 125 ENGINEERED MUTATION SEQRES 1 A 153 ALA THR LYS ALA VAL CYS VAL LEU LYS GLY ASP GLY PRO SEQRES 2 A 153 VAL GLN GLY ILE ILE ASN PHE GLU GLN LYS GLU SER ASN SEQRES 3 A 153 GLY PRO VAL LYS VAL TRP GLY SER ILE LYS GLY LEU THR SEQRES 4 A 153 GLU GLY LEU HIS GLY PHE HIS VAL HIS GLU PHE GLY ASP SEQRES 5 A 153 ASN THR ALA GLY CYS THR SER ALA GLY PRO HIS PHE ASN SEQRES 6 A 153 PRO LEU SER ARG LYS HIS GLY GLY PRO LYS ASP GLU GLU SEQRES 7 A 153 ARG HIS VAL GLY ASP LEU GLY ASN VAL THR ALA ASP LYS SEQRES 8 A 153 ASP GLY VAL ALA ASP VAL SER ILE GLU ASP SER VAL ILE SEQRES 9 A 153 SER LEU SER GLY ASP HIS CSX ILE ILE GLY ARG THR LEU SEQRES 10 A 153 VAL VAL HIS GLU LYS ALA ASP HIS LEU GLY LYS GLY GLY SEQRES 11 A 153 ASN GLU GLU SER THR LYS THR GLY ASN ALA GLY SER ARG SEQRES 12 A 153 LEU ALA CYS GLY VAL ILE GLY ILE ALA GLN SEQRES 1 B 153 ALA THR LYS ALA VAL CYS VAL LEU LYS GLY ASP GLY PRO SEQRES 2 B 153 VAL GLN GLY ILE ILE ASN PHE GLU GLN LYS GLU SER ASN SEQRES 3 B 153 GLY PRO VAL LYS VAL TRP GLY SER ILE LYS GLY LEU THR SEQRES 4 B 153 GLU GLY LEU HIS GLY PHE HIS VAL HIS GLU PHE GLY ASP SEQRES 5 B 153 ASN THR ALA GLY CYS THR SER ALA GLY PRO HIS PHE ASN SEQRES 6 B 153 PRO LEU SER ARG LYS HIS GLY GLY PRO LYS ASP GLU GLU SEQRES 7 B 153 ARG HIS VAL GLY ASP LEU GLY ASN VAL THR ALA ASP LYS SEQRES 8 B 153 ASP GLY VAL ALA ASP VAL SER ILE GLU ASP SER VAL ILE SEQRES 9 B 153 SER LEU SER GLY ASP HIS CSX ILE ILE GLY ARG THR LEU SEQRES 10 B 153 VAL VAL HIS GLU LYS ALA ASP HIS LEU GLY LYS GLY GLY SEQRES 11 B 153 ASN GLU GLU SER THR LYS THR GLY ASN ALA GLY SER ARG SEQRES 12 B 153 LEU ALA CYS GLY VAL ILE GLY ILE ALA GLN SEQRES 1 C 153 ALA THR LYS ALA VAL CYS VAL LEU LYS GLY ASP GLY PRO SEQRES 2 C 153 VAL GLN GLY ILE ILE ASN PHE GLU GLN LYS GLU SER ASN SEQRES 3 C 153 GLY PRO VAL LYS VAL TRP GLY SER ILE LYS GLY LEU THR SEQRES 4 C 153 GLU GLY LEU HIS GLY PHE HIS VAL HIS GLU PHE GLY ASP SEQRES 5 C 153 ASN THR ALA GLY CYS THR SER ALA GLY PRO HIS PHE ASN SEQRES 6 C 153 PRO LEU SER ARG LYS HIS GLY GLY PRO LYS ASP GLU GLU SEQRES 7 C 153 ARG HIS VAL GLY ASP LEU GLY ASN VAL THR ALA ASP LYS SEQRES 8 C 153 ASP GLY VAL ALA ASP VAL SER ILE GLU ASP SER VAL ILE SEQRES 9 C 153 SER LEU SER GLY ASP HIS CSX ILE ILE GLY ARG THR LEU SEQRES 10 C 153 VAL VAL HIS GLU LYS ALA ASP HIS LEU GLY LYS GLY GLY SEQRES 11 C 153 ASN GLU GLU SER THR LYS THR GLY ASN ALA GLY SER ARG SEQRES 12 C 153 LEU ALA CYS GLY VAL ILE GLY ILE ALA GLN MODRES 1P1V CSX A 111 CYS S-OXY CYSTEINE MODRES 1P1V CSX B 111 CYS S-OXY CYSTEINE MODRES 1P1V CSX C 111 CYS S-OXY CYSTEINE HET CSX A 111 7 HET CSX B 111 7 HET CSX C 111 7 HET SO4 A 801 5 HET ZN A 201 1 HET ZN A 202 1 HET SO4 B 802 5 HET ZN B 203 1 HET ZN B 204 1 HET SO4 C 803 5 HET ZN C 205 1 HET ZN C 206 1 HETNAM CSX S-OXY CYSTEINE HETNAM SO4 SULFATE ION HETNAM ZN ZINC ION FORMUL 1 CSX 3(C3 H7 N O3 S) FORMUL 4 SO4 3(O4 S 2-) FORMUL 5 ZN 6(ZN 2+) FORMUL 13 HOH *736(H2 O) HELIX 1 1 CYS A 57 GLY A 61 5 5 HELIX 2 2 SER A 107 CSX A 111 5 5 HELIX 3 3 ALA B 55 GLY B 61 5 7 HELIX 4 4 CYS C 57 GLY C 61 5 5 HELIX 5 5 SER C 107 CSX C 111 5 5 SHEET 1 A 5 ALA A 95 ASP A 101 0 SHEET 2 A 5 VAL A 29 LYS A 36 -1 N ILE A 35 O ALA A 95 SHEET 3 A 5 GLN A 15 GLU A 21 -1 N ASN A 19 O TRP A 32 SHEET 4 A 5 LYS A 3 LEU A 8 -1 N ALA A 4 O PHE A 20 SHEET 5 A 5 GLY A 150 ILE A 151 -1 O GLY A 150 N VAL A 5 SHEET 1 B 4 ASP A 83 ALA A 89 0 SHEET 2 B 4 GLY A 41 HIS A 48 -1 N GLY A 41 O ALA A 89 SHEET 3 B 4 THR A 116 HIS A 120 -1 O THR A 116 N HIS A 48 SHEET 4 B 4 ARG A 143 VAL A 148 -1 O ALA A 145 N VAL A 119 SHEET 1 C 5 ALA B 95 ASP B 101 0 SHEET 2 C 5 VAL B 29 LYS B 36 -1 N ILE B 35 O ALA B 95 SHEET 3 C 5 GLN B 15 GLN B 22 -1 N ASN B 19 O TRP B 32 SHEET 4 C 5 THR B 2 LEU B 8 -1 N THR B 2 O GLN B 22 SHEET 5 C 5 GLY B 150 ALA B 152 -1 O GLY B 150 N VAL B 5 SHEET 1 D 4 ASP B 83 ALA B 89 0 SHEET 2 D 4 GLY B 41 HIS B 48 -1 N GLY B 41 O ALA B 89 SHEET 3 D 4 THR B 116 HIS B 120 -1 O THR B 116 N HIS B 48 SHEET 4 D 4 ARG B 143 VAL B 148 -1 O ALA B 145 N VAL B 119 SHEET 1 E 5 ALA C 95 ASP C 101 0 SHEET 2 E 5 VAL C 29 LYS C 36 -1 N ILE C 35 O ALA C 95 SHEET 3 E 5 GLN C 15 GLU C 21 -1 N GLU C 21 O LYS C 30 SHEET 4 E 5 LYS C 3 LEU C 8 -1 N LEU C 8 O GLY C 16 SHEET 5 E 5 GLY C 150 ILE C 151 -1 O GLY C 150 N VAL C 5 SHEET 1 F 4 ASP C 83 ALA C 89 0 SHEET 2 F 4 GLY C 41 HIS C 48 -1 N GLY C 41 O ALA C 89 SHEET 3 F 4 THR C 116 HIS C 120 -1 O THR C 116 N HIS C 48 SHEET 4 F 4 ARG C 143 VAL C 148 -1 O GLY C 147 N LEU C 117 SSBOND 1 CYS A 57 CYS A 146 1555 1555 2.10 SSBOND 2 CYS B 57 CYS B 146 1555 1555 2.06 SSBOND 3 CYS C 57 CYS C 146 1555 1555 2.12 LINK C HIS A 110 N CSX A 111 1555 1555 1.33 LINK C CSX A 111 N ILE A 112 1555 1555 1.33 LINK C HIS B 110 N CSX B 111 1555 1555 1.32 LINK C CSX B 111 N ILE B 112 1555 1555 1.35 LINK C HIS C 110 N CSX C 111 1555 1555 1.33 LINK C CSX C 111 N ILE C 112 1555 1555 1.35 LINK ND1 HIS A 46 ZN ZN A 201 1555 1555 2.01 LINK NE2 HIS A 48 ZN ZN A 201 1555 1555 2.02 LINK ND1 HIS A 63 ZN ZN A 202 1555 1555 2.02 LINK ND1 HIS A 71 ZN ZN A 202 1555 1555 2.04 LINK ND1 HIS A 80 ZN ZN A 202 1555 1555 2.03 LINK OD1 ASP A 83 ZN ZN A 202 1555 1555 1.95 LINK OD2 ASP A 83 ZN ZN A 202 1555 1555 2.75 LINK NE2 HIS A 120 ZN ZN A 201 1555 1555 2.03 LINK ZN ZN A 201 O1 SO4 A 801 1555 1555 1.95 LINK ND1 HIS B 46 ZN ZN B 203 1555 1555 2.04 LINK NE2 HIS B 48 ZN ZN B 203 1555 1555 2.02 LINK ND1 HIS B 63 ZN ZN B 204 1555 1555 2.05 LINK ND1 HIS B 71 ZN ZN B 204 1555 1555 2.07 LINK ND1 HIS B 80 ZN ZN B 204 1555 1555 2.01 LINK OD1 ASP B 83 ZN ZN B 204 1555 1555 1.76 LINK OD2 ASP B 83 ZN ZN B 204 1555 1555 2.65 LINK NE2 HIS B 120 ZN ZN B 203 1555 1555 1.92 LINK ZN ZN B 203 O2 SO4 B 802 1555 1555 1.92 LINK ND1 HIS C 46 ZN ZN C 205 1555 1555 2.02 LINK NE2 HIS C 48 ZN ZN C 205 1555 1555 2.02 LINK ND1 HIS C 63 ZN ZN C 206 1555 1555 2.03 LINK ND1 HIS C 71 ZN ZN C 206 1555 1555 2.02 LINK ND1 HIS C 80 ZN ZN C 206 1555 1555 1.98 LINK OD1 ASP C 83 ZN ZN C 206 1555 1555 1.96 LINK NE2 HIS C 120 ZN ZN C 205 1555 1555 2.03 LINK ZN ZN C 205 O1 SO4 C 803 1555 1555 1.95 SITE 1 AC1 12 HIS A 46 HIS A 48 HIS A 63 HIS A 120 SITE 2 AC1 12 THR A 137 ARG A 143 ZN A 201 HOH A 823 SITE 3 AC1 12 HOH A 852 HOH A 868 HOH A 877 ASN C 26 SITE 1 AC2 10 HIS B 46 HIS B 48 HIS B 63 HIS B 120 SITE 2 AC2 10 THR B 137 ARG B 143 ZN B 203 HOH B 881 SITE 3 AC2 10 HOH B 897 HOH B 899 SITE 1 AC3 12 ASN A 26 HIS C 46 HIS C 48 HIS C 63 SITE 2 AC3 12 HIS C 120 THR C 137 ARG C 143 ZN C 205 SITE 3 AC3 12 HOH C 819 HOH C 826 HOH C 838 HOH C 862 SITE 1 AC4 5 HIS A 46 HIS A 48 HIS A 63 HIS A 120 SITE 2 AC4 5 SO4 A 801 SITE 1 AC5 4 HIS A 63 HIS A 71 HIS A 80 ASP A 83 SITE 1 AC6 5 HIS B 46 HIS B 48 HIS B 63 HIS B 120 SITE 2 AC6 5 SO4 B 802 SITE 1 AC7 4 HIS B 63 HIS B 71 HIS B 80 ASP B 83 SITE 1 AC8 5 HIS C 46 HIS C 48 HIS C 63 HIS C 120 SITE 2 AC8 5 SO4 C 803 SITE 1 AC9 4 HIS C 63 HIS C 71 HIS C 80 ASP C 83 CRYST1 70.449 101.140 143.080 90.00 90.00 90.00 C 2 2 21 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014195 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009887 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006989 0.00000 MASTER 402 0 12 5 27 0 18 6 0 0 0 36 END