HEADER TRANSCRIPTION 26-SEP-02 1MVO TITLE CRYSTAL STRUCTURE OF THE PHOP RECEIVER DOMAIN FROM BACILLUS TITLE 2 SUBTILIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOP RESPONSE REGULATOR; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: N-TERMINAL DOMAIN; COMPND 5 SYNONYM: ALKALINE PHOSPHATASE SYNTHESIS TRANSCRIPTIONAL COMPND 6 REGULATORY PROTEIN PHOP; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 3 ORGANISM_TAXID: 1423; SOURCE 4 GENE: PHOP; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET16B KEYWDS PHOSPHATE REGULON, TRANSCRIPTIONAL REGULATORY PROTEIN, KEYWDS 2 ALPHA/BETA DOUBLY WOUND FOLD, RESPONSE REGULATOR, KEYWDS 3 PHOSPHORYLATION, ASYMMETRIC INTERFACE, TANDEM ASSOCIATION, KEYWDS 4 STRUCTURAL PROTEOMICS IN EUROPE, SPINE, STRUCTURAL GENOMICS EXPDTA X-RAY DIFFRACTION AUTHOR C.BIRCK,Y.CHEN,F.M.HULETT,J.P.SAMAMA,STRUCTURAL PROTEOMICS AUTHOR 2 IN EUROPE (SPINE) REVDAT 3 24-FEB-09 1MVO 1 VERSN REVDAT 2 11-FEB-03 1MVO 1 JRNL REMARK REVDAT 1 16-OCT-02 1MVO 0 JRNL AUTH C.BIRCK,Y.CHEN,F.M.HULETT,J.P.SAMAMA JRNL TITL THE CRYSTAL STRUCTURE OF THE PHOSPHORYLATION JRNL TITL 2 DOMAIN IN PHOP REVEALS A FUNCTIONAL TANDEM JRNL TITL 3 ASSOCIATION MEDIATED BY AN ASYMMETRIC INTERFACE JRNL REF J.BACTERIOL. V. 185 254 2003 JRNL REFN ISSN 0021-9193 JRNL PMID 12486062 JRNL DOI 10.1128/JB.185.1.254-261.2003 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH Y.CHEN,C.BIRCK,J.P.SAMAMA,F.M.HULETT REMARK 1 TITL RESIDUE R113 IS ESSENTIAL FOR PHOP DIMERIZATION REMARK 1 TITL 2 AND FUNCTION: A RESIDUE BURIED IN THE ASYMMETRIC REMARK 1 TITL 3 PHOP DIMER INTERFACE DETERMINED IN THE PHOPN REMARK 1 TITL 4 THREE-DIMENSIONAL CRYSTAL STRUCTURE REMARK 1 REF J.BACTERIOL. V. 185 262 2003 REMARK 1 REFN ISSN 0021-9193 REMARK 1 DOI 10.1128/JB.185.1.262-273.2003 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.7 REMARK 3 NUMBER OF REFLECTIONS : 17226 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 878 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 937 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 3 REMARK 3 SOLVENT ATOMS : 174 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.52 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.17000 REMARK 3 B22 (A**2) : -0.17000 REMARK 3 B33 (A**2) : 0.34000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : NULL ; NULL REMARK 3 ANGLE DISTANCE (A) : NULL ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: USED WEIGHTED FULL MATRIX MAXIMUM REMARK 3 LIKELIHOOD PROCEDURE REMARK 4 REMARK 4 1MVO COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 30-SEP-02. REMARK 100 THE RCSB ID CODE IS RCSB017223. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-OCT-00 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.934 REMARK 200 MONOCHROMATOR : SAGITALLY FOCUSED GE(220) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18122 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 27.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.6 REMARK 200 DATA REDUNDANCY : 6.100 REMARK 200 R MERGE (I) : 0.09100 REMARK 200 R SYM (I) : 0.09100 REMARK 200 FOR THE DATA SET : 5.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.30 REMARK 200 R MERGE FOR SHELL (I) : 0.18700 REMARK 200 R SYM FOR SHELL (I) : 0.18700 REMARK 200 FOR SHELL : 3.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: METAL-FREE PHOPN STRUCTURE SOLVED BY MAD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.65 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 10000, SODIUM CITRATE, PEG MME REMARK 280 550, PH 5.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 67.40550 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 22.85200 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 22.85200 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 33.70275 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 22.85200 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 22.85200 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 101.10825 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 22.85200 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 22.85200 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 33.70275 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 22.85200 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 22.85200 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 101.10825 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 67.40550 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A DIMER GENERATED FROM THE REMARK 300 MONOMER IN THE ASYMMETRIC UNIT BY THE OPERATION : X+1/2, -Y+3/2, REMARK 300 -Z+3/4 REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 22.85200 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 68.55600 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 101.10825 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 0 REMARK 465 GLU A 122 REMARK 465 ILE A 123 REMARK 465 ARG A 124 REMARK 465 ALA A 125 REMARK 465 PRO A 126 REMARK 465 SER A 127 REMARK 465 SER A 128 REMARK 465 GLU A 129 REMARK 465 MET A 130 REMARK 465 LYS A 131 REMARK 465 ASN A 132 REMARK 465 ASP A 133 REMARK 465 GLU A 134 REMARK 465 MET A 135 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 1 CG SD CE REMARK 470 GLU A 11 CG CD OE1 OE2 REMARK 470 GLU A 12 CG CD OE1 OE2 REMARK 470 LEU A 17 CG CD1 CD2 REMARK 470 GLU A 36 CG CD OE1 OE2 REMARK 470 LYS A 83 CG CD CE NZ REMARK 470 ASP A 84 CG OD1 OD2 REMARK 470 GLU A 85 CG CD OE1 OE2 REMARK 470 GLU A 86 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 10 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 ASP A 34 CB - CG - OD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 ASP A 48 CB - CG - OD2 ANGL. DEV. = 5.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 58 -59.17 76.58 REMARK 500 ARG A 120 -8.56 -58.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 200 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 10 OD2 REMARK 620 2 ASP A 53 OD2 88.7 REMARK 620 3 MET A 55 O 86.4 88.4 REMARK 620 4 HOH A 354 O 172.3 97.1 98.8 REMARK 620 5 HOH A 373 O 91.9 83.8 172.1 83.8 REMARK 620 6 HOH A 214 O 83.5 171.7 93.9 90.4 93.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 201 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 372 O REMARK 620 2 GLU A 37 OE2 99.9 REMARK 620 3 HOH A 355 O 170.7 87.6 REMARK 620 4 HOH A 356 O 90.8 94.2 94.2 REMARK 620 5 HOH A 364 O 86.7 169.9 85.1 93.3 REMARK 620 6 HOH A 375 O 83.9 89.2 90.7 174.1 83.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 202 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 98 OD2 REMARK 620 2 HOH A 246 O 81.4 REMARK 620 3 GLY A 96 O 83.3 112.3 REMARK 620 4 HOH A 253 O 176.7 101.7 94.4 REMARK 620 5 PHE A 75 O 94.1 122.4 124.2 85.3 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 200 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 201 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: IGBMC-1123-000 RELATED DB: TARGETDB DBREF 1MVO A 1 135 UNP P13792 PHOP_BACSU 1 135 SEQADV 1MVO HIS A 0 UNP P13792 CLONING ARTIFACT SEQRES 1 A 136 HIS MET ASN LYS LYS ILE LEU VAL VAL ASP ASP GLU GLU SEQRES 2 A 136 SER ILE VAL THR LEU LEU GLN TYR ASN LEU GLU ARG SER SEQRES 3 A 136 GLY TYR ASP VAL ILE THR ALA SER ASP GLY GLU GLU ALA SEQRES 4 A 136 LEU LYS LYS ALA GLU THR GLU LYS PRO ASP LEU ILE VAL SEQRES 5 A 136 LEU ASP VAL MET LEU PRO LYS LEU ASP GLY ILE GLU VAL SEQRES 6 A 136 CYS LYS GLN LEU ARG GLN GLN LYS LEU MET PHE PRO ILE SEQRES 7 A 136 LEU MET LEU THR ALA LYS ASP GLU GLU PHE ASP LYS VAL SEQRES 8 A 136 LEU GLY LEU GLU LEU GLY ALA ASP ASP TYR MET THR LYS SEQRES 9 A 136 PRO PHE SER PRO ARG GLU VAL ASN ALA ARG VAL LYS ALA SEQRES 10 A 136 ILE LEU ARG ARG SER GLU ILE ARG ALA PRO SER SER GLU SEQRES 11 A 136 MET LYS ASN ASP GLU MET HET MN A 200 1 HET NA A 201 1 HET NA A 202 1 HETNAM MN MANGANESE (II) ION HETNAM NA SODIUM ION FORMUL 2 MN MN 2+ FORMUL 3 NA 2(NA 1+) FORMUL 5 HOH *174(H2 O) HELIX 1 1 GLU A 11 SER A 25 1 15 HELIX 2 2 ASP A 34 LYS A 46 1 13 HELIX 3 3 ASP A 60 GLN A 71 1 12 HELIX 4 4 ASP A 88 LEU A 95 1 8 HELIX 5 5 SER A 106 ARG A 120 1 15 SHEET 1 A 5 ASP A 28 ALA A 32 0 SHEET 2 A 5 LYS A 4 VAL A 8 1 N ILE A 5 O ASP A 28 SHEET 3 A 5 LEU A 49 ASP A 53 1 O VAL A 51 N LEU A 6 SHEET 4 A 5 ILE A 77 THR A 81 1 O LEU A 78 N ILE A 50 SHEET 5 A 5 ASP A 99 THR A 102 1 O ASP A 99 N MET A 79 LINK MN MN A 200 OD2 ASP A 10 1555 1555 2.12 LINK MN MN A 200 OD2 ASP A 53 1555 1555 2.01 LINK MN MN A 200 O MET A 55 1555 1555 2.16 LINK MN MN A 200 O HOH A 354 1555 1555 2.19 LINK MN MN A 200 O HOH A 373 1555 1555 2.06 LINK MN MN A 200 O HOH A 214 1555 1555 2.22 LINK NA NA A 201 O HOH A 372 1555 1555 2.03 LINK NA NA A 201 OE2 GLU A 37 1555 1555 2.17 LINK NA NA A 201 O HOH A 355 1555 1555 2.22 LINK NA NA A 201 O HOH A 356 1555 1555 2.20 LINK NA NA A 201 O HOH A 364 1555 1555 2.09 LINK NA NA A 201 O HOH A 375 1555 1555 2.04 LINK NA NA A 202 OD2 ASP A 98 1555 1555 2.39 LINK NA NA A 202 O HOH A 246 1555 1555 2.34 LINK NA NA A 202 O GLY A 96 1555 1555 2.30 LINK NA NA A 202 O HOH A 253 1555 1555 2.39 LINK NA NA A 202 O PHE A 75 1555 1555 2.24 CISPEP 1 LYS A 103 PRO A 104 0 0.51 SITE 1 AC1 6 ASP A 10 ASP A 53 MET A 55 HOH A 214 SITE 2 AC1 6 HOH A 354 HOH A 373 SITE 1 AC2 6 GLU A 37 HOH A 355 HOH A 356 HOH A 364 SITE 2 AC2 6 HOH A 372 HOH A 375 SITE 1 AC3 5 PHE A 75 GLY A 96 ASP A 98 HOH A 246 SITE 2 AC3 5 HOH A 253 CRYST1 45.704 45.704 134.811 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021880 0.000000 0.000000 0.00000 SCALE2 0.000000 0.021880 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007418 0.00000 MASTER 347 0 3 5 5 0 6 6 0 0 0 11 END