HEADER TRANSLATION 07-AUG-02 1ME2 TITLE THE MODEL OF NASCENT PEPTIDE CHAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: NASCENT PEPTIDE CHAIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: THE PEPTIDE WAS CHEMICALLY SYNTHESIZED. KEYWDS NASCENT PEPTIDE EXPDTA THEORETICAL MODEL AUTHOR C.Q.LIU,S.X.LIU,S.Q.LIU REVDAT 1 28-AUG-02 1ME2 0 JRNL AUTH C.Q.LIU,S.X.LIU,S.Q.LIU,M.W.JIA,J.HE JRNL TITL THE RESEARCH OF MRNA'S CONFORMATION AND JRNL TITL 2 INTERACTION BETWEEN MRNA AND TRNA IN TRANSLATION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH S.Q.LIU,C.Q.LIU REMARK 1 TITL THE TOPOLOGICAL CONFIGURATION AND CONFORMATIONAL REMARK 1 TITL 2 ANALYSIS OF MRNA IN TRANSLATION REMARK 1 REF CHIN.SCI.BULL. V. 47 384 2002 REMARK 1 REFN ASTM CSBUEF CC ISSN 1001-6538 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NULL REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1ME2 COMPLIES WITH FORMAT V. 2.3, 09-JULY-1998 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-AUG-2002. REMARK 100 THE RCSB ID CODE IS RCSB016844. REMARK 220 REMARK 220 EXPERIMENTAL DETAILS REMARK 220 EXPERIMENT TYPE : THEORETICAL MODELLING REMARK 220 REMARK 220 REMARK: THIS NASENT PEPTIDE STRUCTURE WAS BUILT BY USING REMARK 220 INSIGHTII SOFTWARE PACKAGE ON SGI WORKSTATION. REMARK 225 REMARK 225 THEORETICAL MODEL REMARK 225 THE COORDINATES IN THIS ENTRY REPRESENT A MODEL STRUCTURE. REMARK 225 PROTEIN DATA BANK CONVENTIONS REQUIRE THAT CRYST1 AND REMARK 225 SCALE RECORDS BE INCLUDED, BUT THE VALUES ON THESE REMARK 225 RECORDS ARE MEANINGLESS. REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1K7N RELATED DB: PDB REMARK 900 THE INTERACTION BETWEEN MRNA AND TRNA (MODEL2) REMARK 900 RELATED ID: 1K7O RELATED DB: PDB REMARK 900 THE INTERACTION BETWEEN MRNA AND TRNA (MODEL3) REMARK 900 RELATED ID: 1K7P RELATED DB: PDB REMARK 900 THE INTERACTION BETWEEN MRNA AND TRNA (MODEL4) REMARK 900 RELATED ID: 1K7R RELATED DB: PDB REMARK 900 THE INTERACTION BETWEEN MRNA AND TRNA (MODEL1) REMARK 900 RELATED ID: 1DUH RELATED DB: PDB REMARK 900 1DUH CONTAINS THE CONSERVED DOMAIN IV OF E. COLI 4.5S RNA SEQRES 1 A 5 VAL ARG LYS GLU ALA CISPEP 1 LYS A 3 GLU A 4 0 -4.69 CISPEP 2 GLU A 4 ALA A 5 0 5.55 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 ATOM 1 N VAL A 1 12.352 107.087 -0.553 1.00 0.00 N ATOM 2 CA VAL A 1 13.310 107.040 0.551 1.00 0.00 C ATOM 3 C VAL A 1 13.652 105.620 0.766 1.00 0.00 C ATOM 4 O VAL A 1 14.821 105.270 0.951 1.00 0.00 O ATOM 5 CB VAL A 1 12.620 107.579 1.831 1.00 0.00 C ATOM 6 CG1 VAL A 1 13.592 107.480 3.023 1.00 0.00 C ATOM 7 CG2 VAL A 1 12.211 109.053 1.645 1.00 0.00 C ATOM 8 1H VAL A 1 12.046 108.050 -0.717 1.00 0.00 H ATOM 9 2H VAL A 1 11.540 106.506 -0.316 1.00 0.00 H ATOM 10 HA VAL A 1 14.215 107.629 0.334 1.00 0.00 H ATOM 11 HB VAL A 1 11.726 106.975 2.041 1.00 0.00 H ATOM 12 1HG1 VAL A 1 13.146 107.828 3.847 1.00 0.00 H ATOM 13 2HG1 VAL A 1 14.410 108.024 2.832 1.00 0.00 H ATOM 14 3HG1 VAL A 1 13.852 106.525 3.163 1.00 0.00 H ATOM 15 1HG2 VAL A 1 11.769 109.385 2.479 1.00 0.00 H ATOM 16 2HG2 VAL A 1 11.574 109.129 0.878 1.00 0.00 H ATOM 17 3HG2 VAL A 1 13.024 109.605 1.459 1.00 0.00 H ATOM 18 N ARG A 2 12.642 104.693 0.744 1.00 0.00 N ATOM 19 CA ARG A 2 12.924 103.341 0.981 1.00 0.00 C ATOM 20 C ARG A 2 12.237 102.594 -0.096 1.00 0.00 C ATOM 21 O ARG A 2 11.115 102.975 -0.446 1.00 0.00 O ATOM 22 CB ARG A 2 12.273 103.053 2.330 1.00 0.00 C ATOM 23 CG ARG A 2 12.501 101.612 2.780 1.00 0.00 C ATOM 24 CD ARG A 2 11.933 101.538 4.196 1.00 0.00 C ATOM 25 NE ARG A 2 12.285 100.315 4.843 1.00 0.00 N ATOM 26 CZ ARG A 2 12.140 100.205 6.251 1.00 0.00 C ATOM 27 NH1 ARG A 2 11.585 101.275 7.007 1.00 0.00 N ATOM 28 NH2 ARG A 2 12.551 99.032 6.911 1.00 0.00 N ATOM 29 H ARG A 2 11.708 104.973 0.562 1.00 0.00 H ATOM 30 HA ARG A 2 14.005 103.139 1.027 1.00 0.00 H ATOM 31 1HB ARG A 2 12.661 103.670 3.014 1.00 0.00 H ATOM 32 2HB ARG A 2 11.289 103.215 2.254 1.00 0.00 H ATOM 33 1HG ARG A 2 12.019 100.976 2.176 1.00 0.00 H ATOM 34 2HG ARG A 2 13.477 101.396 2.782 1.00 0.00 H ATOM 35 1HD ARG A 2 12.295 102.302 4.730 1.00 0.00 H ATOM 36 2HD ARG A 2 10.937 101.604 4.150 1.00 0.00 H ATOM 37 HE ARG A 2 12.666 99.558 4.312 1.00 0.00 H ATOM 38 1HH1 ARG A 2 11.288 102.116 6.562 1.00 0.00 H ATOM 39 2HH1 ARG A 2 11.491 101.188 7.996 1.00 0.00 H ATOM 40 1HH2 ARG A 2 12.945 98.276 6.393 1.00 0.00 H ATOM 41 2HH2 ARG A 2 12.453 98.955 7.902 1.00 0.00 H ATOM 42 N LYS A 3 12.894 101.578 -0.804 1.00 0.00 N ATOM 43 CA LYS A 3 12.328 101.073 -2.026 1.00 0.00 C ATOM 44 C LYS A 3 12.259 99.533 -1.828 1.00 0.00 C ATOM 45 O LYS A 3 11.430 99.173 -0.990 1.00 0.00 O ATOM 46 CB LYS A 3 13.164 101.618 -3.219 1.00 0.00 C ATOM 47 CG LYS A 3 13.181 103.158 -3.198 1.00 0.00 C ATOM 48 CD LYS A 3 14.167 103.696 -4.232 1.00 0.00 C ATOM 49 CE LYS A 3 14.220 105.225 -4.106 1.00 0.00 C ATOM 50 NZ LYS A 3 15.206 105.754 -5.052 1.00 0.00 N ATOM 51 H LYS A 3 13.755 101.223 -0.474 1.00 0.00 H ATOM 52 HA LYS A 3 11.302 101.475 -2.069 1.00 0.00 H ATOM 53 1HB LYS A 3 14.101 101.277 -3.149 1.00 0.00 H ATOM 54 2HB LYS A 3 12.758 101.304 -4.078 1.00 0.00 H ATOM 55 1HG LYS A 3 12.265 103.500 -3.408 1.00 0.00 H ATOM 56 2HG LYS A 3 13.454 103.472 -2.289 1.00 0.00 H ATOM 57 1HD LYS A 3 15.075 103.312 -4.064 1.00 0.00 H ATOM 58 2HD LYS A 3 13.863 103.443 -5.151 1.00 0.00 H ATOM 59 1HE LYS A 3 13.320 105.609 -4.313 1.00 0.00 H ATOM 60 2HE LYS A 3 14.483 105.475 -3.175 1.00 0.00 H ATOM 61 1HZ LYS A 3 14.937 105.490 -6.009 1.00 0.00 H ATOM 62 2HZ LYS A 3 15.240 106.779 -4.972 1.00 0.00 H ATOM 63 N GLU A 4 13.051 98.435 -2.414 1.00 0.00 N ATOM 64 CA GLU A 4 14.098 98.441 -3.439 1.00 0.00 C ATOM 65 C GLU A 4 14.248 96.959 -3.766 1.00 0.00 C ATOM 66 O GLU A 4 14.695 96.249 -2.859 1.00 0.00 O ATOM 67 CB GLU A 4 15.424 99.044 -2.871 1.00 0.00 C ATOM 68 CG GLU A 4 15.937 98.305 -1.631 1.00 0.00 C ATOM 69 CD GLU A 4 17.268 97.726 -1.983 1.00 0.00 C ATOM 70 OE1 GLU A 4 18.001 97.172 -1.076 1.00 0.00 O ATOM 71 OE2 GLU A 4 17.683 97.798 -3.203 1.00 0.00 O ATOM 72 H GLU A 4 12.836 97.528 -2.067 1.00 0.00 H ATOM 73 HA GLU A 4 13.833 99.038 -4.322 1.00 0.00 H ATOM 74 1HB GLU A 4 16.125 98.998 -3.582 1.00 0.00 H ATOM 75 2HB GLU A 4 15.259 100.000 -2.626 1.00 0.00 H ATOM 76 1HG GLU A 4 16.033 98.943 -0.867 1.00 0.00 H ATOM 77 2HG GLU A 4 15.302 97.576 -1.379 1.00 0.00 H ATOM 78 N ALA A 5 13.823 96.300 -4.957 1.00 0.00 N ATOM 79 CA ALA A 5 13.276 96.946 -6.108 1.00 0.00 C ATOM 80 C ALA A 5 12.442 95.954 -6.796 1.00 0.00 C ATOM 81 O ALA A 5 12.587 94.714 -6.479 1.00 0.00 O ATOM 82 CB ALA A 5 14.409 97.318 -7.081 1.00 0.00 C ATOM 83 OXT ALA A 5 11.586 96.317 -7.688 1.00 0.00 O ATOM 84 H ALA A 5 13.912 95.311 -4.998 1.00 0.00 H ATOM 85 HA ALA A 5 12.709 97.850 -5.868 1.00 0.00 H ATOM 86 1HB ALA A 5 14.023 97.770 -7.886 1.00 0.00 H ATOM 87 2HB ALA A 5 14.892 96.490 -7.364 1.00 0.00 H ATOM 88 3HB ALA A 5 15.049 97.938 -6.627 1.00 0.00 H TER 89 ALA A 5 MASTER 44 0 0 0 0 0 0 6 88 1 0 1 END