HEADER METAL BINDING PROTEIN 13-JUN-02 1M0G TITLE SOLUTION STRUCTURE OF THE ALPHA DOMAIN OF MT_NC COMPND MOL_ID: 1; COMPND 2 MOLECULE: METALLOTHIONEIN MT_NC; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ALPHA DOMAIN; COMPND 5 SYNONYM: METALLOTHIONEIN A; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NOTOTHENIA CORIICEPS; SOURCE 3 ORGANISM_COMMON: YELLOWBELLY ROCKCOD; SOURCE 4 ORGANISM_TAXID: 8208; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PGEM-MT KEYWDS CADMIUM-THIOLATE CLUSTER, METAL BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR C.CAPASSO,V.CARGINALE,O.CRESCENZI,D.DI MARO,E.PARISI, AUTHOR 2 R.SPADACCINI,P.A.TEMUSSI REVDAT 2 24-FEB-09 1M0G 1 VERSN REVDAT 1 06-MAY-03 1M0G 0 JRNL AUTH C.CAPASSO,V.CARGINALE,O.CRESCENZI,D.DI MARO, JRNL AUTH 2 E.PARISI,R.SPADACCINI,P.A.TEMUSSI JRNL TITL SOLUTION STRUCTURE OF MT_NC, A NOVEL JRNL TITL 2 METALLOTHIONEIN FROM THE ANTARCTIC FISH NOTOTHENIA JRNL TITL 3 CORIICEPS. JRNL REF STRUCTURE V. 11 435 2003 JRNL REFN ISSN 0969-2126 JRNL PMID 12679021 JRNL DOI 10.1016/S0969-2126(03)00044-3 REMARK 1 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : DYANA 1.5 REMARK 3 AUTHORS : GUENTERT REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURES ARE BASED ON A TOTAL REMARK 3 OF 373 NOES,16 CD-S BONDS AND 40 DIHEDRAL ANGLE RESTRAINTS REMARK 4 REMARK 4 1M0G COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 21-JUN-02. REMARK 100 THE RCSB ID CODE IS RCSB016443. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 7 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 2MM METALLOTHOINEIN; 95% H2O, REMARK 210 5% D2O; 2MM METALLOTHOINEIN, U REMARK 210 -113CD; 95% H2O, 5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY, 2D TOCSY, E-COSY, REMARK 210 DQF-COSY, [113CD,1H]COSY REMARK 210 SPECTROMETER FIELD STRENGTH : 400 MHZ, 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE, NMRVIEW 4.0.3, DYANA REMARK 210 1.5 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 20 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : ALL CALCULATED STRUCTURES REMARK 210 SUBMITTED REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 CYS A 38 -74.61 -125.93 REMARK 500 1 SER A 44 60.80 -68.84 REMARK 500 1 CYS A 46 98.57 46.21 REMARK 500 1 CYS A 53 111.03 -174.43 REMARK 500 1 THR A 59 -95.06 -47.76 REMARK 500 1 CYS A 60 82.60 -179.56 REMARK 500 1 ASP A 61 -167.20 -125.82 REMARK 500 1 CYS A 64 -79.74 -131.88 REMARK 500 2 SER A 44 61.10 -68.66 REMARK 500 2 CYS A 46 91.91 40.37 REMARK 500 2 CYS A 53 111.79 61.73 REMARK 500 2 THR A 59 -95.73 -84.75 REMARK 500 2 CYS A 60 82.89 178.28 REMARK 500 2 ASP A 61 -169.86 -126.71 REMARK 500 2 CYS A 64 -79.97 -130.26 REMARK 500 3 CYS A 46 97.14 45.71 REMARK 500 3 THR A 59 -97.38 -79.71 REMARK 500 3 CYS A 60 81.29 179.95 REMARK 500 3 ASP A 61 -167.83 -127.33 REMARK 500 3 CYS A 64 -78.93 -131.83 REMARK 500 4 CYS A 38 -74.74 -128.13 REMARK 500 4 SER A 44 60.12 -69.30 REMARK 500 4 CYS A 46 97.56 45.40 REMARK 500 4 THR A 59 -89.71 -58.31 REMARK 500 4 CYS A 60 79.08 179.21 REMARK 500 4 ASP A 61 -168.64 -126.26 REMARK 500 4 CYS A 64 -80.47 -131.46 REMARK 500 5 CYS A 46 93.75 41.61 REMARK 500 5 CYS A 53 110.58 -178.08 REMARK 500 5 THR A 59 -100.10 -48.37 REMARK 500 5 CYS A 60 82.27 179.84 REMARK 500 5 ASP A 61 -166.78 -125.11 REMARK 500 5 CYS A 64 -79.23 -131.86 REMARK 500 6 CYS A 38 -73.21 -158.41 REMARK 500 6 SER A 44 63.32 -69.01 REMARK 500 6 CYS A 46 96.08 42.31 REMARK 500 6 CYS A 53 112.67 62.16 REMARK 500 6 THR A 59 -89.34 -67.87 REMARK 500 6 CYS A 60 82.37 178.07 REMARK 500 6 ASP A 61 -168.14 -129.42 REMARK 500 6 CYS A 64 -79.11 -131.13 REMARK 500 7 CYS A 38 -75.66 -110.56 REMARK 500 7 SER A 44 58.80 -68.92 REMARK 500 7 CYS A 46 89.44 36.51 REMARK 500 7 CYS A 53 105.85 178.82 REMARK 500 7 THR A 59 -94.91 -64.78 REMARK 500 7 CYS A 60 88.32 179.33 REMARK 500 7 CYS A 64 -87.70 -130.52 REMARK 500 8 SER A 44 63.87 -68.58 REMARK 500 8 CYS A 46 93.35 40.66 REMARK 500 8 CYS A 53 113.48 -178.54 REMARK 500 8 LYS A 56 -81.70 -38.17 REMARK 500 8 THR A 59 -96.14 -80.95 REMARK 500 8 CYS A 60 73.50 173.35 REMARK 500 8 CYS A 64 -78.08 -129.43 REMARK 500 9 CYS A 46 105.01 51.02 REMARK 500 9 CYS A 53 109.91 -179.13 REMARK 500 9 THR A 59 -95.01 -84.66 REMARK 500 9 CYS A 60 74.24 178.30 REMARK 500 9 ASP A 61 -168.58 -118.45 REMARK 500 9 CYS A 65 -53.56 70.69 REMARK 500 10 CYS A 38 -45.07 -165.40 REMARK 500 10 CYS A 46 94.89 43.78 REMARK 500 10 THR A 59 -93.24 -85.87 REMARK 500 10 CYS A 60 79.52 176.16 REMARK 500 10 ASP A 61 -167.08 -123.05 REMARK 500 10 CYS A 65 -52.35 69.30 REMARK 500 11 CYS A 38 -55.82 -134.75 REMARK 500 11 CYS A 46 100.08 48.37 REMARK 500 11 CYS A 53 116.33 62.63 REMARK 500 11 THR A 59 -114.78 -92.25 REMARK 500 11 CYS A 60 75.01 179.29 REMARK 500 11 ASP A 61 -161.22 -125.87 REMARK 500 11 CYS A 64 -144.52 -125.36 REMARK 500 12 CYS A 38 -73.35 -148.76 REMARK 500 12 SER A 44 61.30 -69.12 REMARK 500 12 CYS A 46 95.69 42.60 REMARK 500 12 CYS A 53 112.73 62.20 REMARK 500 12 LYS A 58 -178.13 -64.49 REMARK 500 12 THR A 59 -86.81 -73.56 REMARK 500 12 CYS A 60 83.18 177.06 REMARK 500 12 ASP A 61 -169.14 -128.37 REMARK 500 12 CYS A 64 -78.15 -129.24 REMARK 500 13 CYS A 38 -45.46 -165.25 REMARK 500 13 CYS A 46 97.52 46.07 REMARK 500 13 CYS A 53 110.41 -177.78 REMARK 500 13 THR A 59 -85.74 -65.97 REMARK 500 13 CYS A 60 78.95 178.18 REMARK 500 13 ASP A 61 -167.43 -128.01 REMARK 500 13 CYS A 64 -79.41 -131.07 REMARK 500 14 CYS A 39 140.33 -172.35 REMARK 500 14 CYS A 46 99.24 48.50 REMARK 500 14 CYS A 53 108.92 -178.23 REMARK 500 14 THR A 59 -98.76 -48.35 REMARK 500 14 CYS A 60 83.46 179.99 REMARK 500 14 ASP A 61 -166.82 -126.19 REMARK 500 14 CYS A 64 -83.76 -131.05 REMARK 500 15 CYS A 38 -45.67 -165.32 REMARK 500 15 CYS A 39 139.75 -172.17 REMARK 500 15 CYS A 46 97.50 46.46 REMARK 500 15 CYS A 53 108.48 -48.14 REMARK 500 15 THR A 59 -98.09 -47.98 REMARK 500 15 CYS A 60 83.50 -179.63 REMARK 500 15 ASP A 61 -165.72 -124.80 REMARK 500 15 CYS A 64 -79.35 -131.31 REMARK 500 16 CYS A 38 -74.09 -52.40 REMARK 500 16 SER A 44 59.99 -69.28 REMARK 500 16 CYS A 46 100.80 48.60 REMARK 500 16 CYS A 53 111.75 -171.11 REMARK 500 16 THR A 59 -93.62 -57.88 REMARK 500 16 CYS A 60 79.38 179.59 REMARK 500 16 ASP A 61 -169.26 -120.14 REMARK 500 16 CYS A 64 -75.38 -130.20 REMARK 500 17 CYS A 46 101.29 50.60 REMARK 500 17 CYS A 53 114.05 -178.45 REMARK 500 17 THR A 59 -94.41 -36.06 REMARK 500 17 CYS A 60 101.81 140.86 REMARK 500 17 ASP A 61 107.39 -168.46 REMARK 500 17 THR A 62 -39.93 61.76 REMARK 500 17 CYS A 64 -143.32 -141.83 REMARK 500 18 CYS A 39 141.62 -172.40 REMARK 500 18 CYS A 46 96.21 44.92 REMARK 500 18 CYS A 53 109.48 -47.10 REMARK 500 18 THR A 59 -90.57 -51.10 REMARK 500 18 CYS A 60 75.69 177.67 REMARK 500 18 ASP A 61 -167.24 -119.21 REMARK 500 18 CYS A 65 -54.01 68.43 REMARK 500 19 CYS A 38 -74.58 -136.09 REMARK 500 19 SER A 44 49.88 -91.23 REMARK 500 19 CYS A 53 111.92 -178.27 REMARK 500 19 THR A 59 -89.86 -56.74 REMARK 500 19 CYS A 60 77.04 178.75 REMARK 500 19 ASP A 61 -167.53 -121.25 REMARK 500 19 CYS A 65 -54.46 70.56 REMARK 500 20 CYS A 38 -73.43 -155.15 REMARK 500 20 SER A 44 59.18 -69.61 REMARK 500 20 CYS A 46 109.97 53.34 REMARK 500 20 THR A 59 -101.68 -48.97 REMARK 500 20 CYS A 60 90.32 148.04 REMARK 500 20 THR A 62 -36.27 63.60 REMARK 500 20 CYS A 64 -141.00 -140.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 1 CD A 101 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 39 SG REMARK 620 2 CYS A 38 SG 112.2 REMARK 620 3 CYS A 49 SG 114.7 115.9 REMARK 620 4 CYS A 53 SG 107.9 99.5 104.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 1 CD A 102 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 42 SG REMARK 620 2 CYS A 46 SG 111.8 REMARK 620 3 CYS A 49 SG 119.3 110.7 REMARK 620 4 CYS A 65 SG 107.2 97.7 107.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 1 CD A 103 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 39 SG REMARK 620 2 CYS A 41 SG 131.6 REMARK 620 3 CYS A 55 SG 103.6 111.6 REMARK 620 4 CYS A 42 SG 102.4 105.1 96.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 1 CD A 104 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 55 SG REMARK 620 2 CYS A 60 SG 112.8 REMARK 620 3 CYS A 64 SG 115.5 120.9 REMARK 620 4 CYS A 65 SG 98.0 99.7 105.1 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 101 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 102 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 103 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 104 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1M0J RELATED DB: PDB REMARK 900 1M0J CONTAINS BETA DOMAIN OF THE SAME PROTEIN DBREF 1M0G A 37 66 UNP P62339 MTA_NOTCO 31 60 SEQRES 1 A 30 SER CYS CYS PRO CYS CYS PRO SER GLY CYS THR LYS CYS SEQRES 2 A 30 ALA SER GLY CYS VAL CYS LYS GLY LYS THR CYS ASP THR SEQRES 3 A 30 SER CYS CYS GLN HET CD A 101 1 HET CD A 102 1 HET CD A 103 1 HET CD A 104 1 HETNAM CD CADMIUM ION FORMUL 2 CD 4(CD 2+) HELIX 1 1 CYS A 46 SER A 51 1 6 HELIX 2 2 CYS A 53 GLY A 57 5 5 LINK CD CD A 101 SG CYS A 39 1555 1555 2.60 LINK CD CD A 101 SG CYS A 38 1555 1555 2.49 LINK CD CD A 101 SG CYS A 49 1555 1555 2.41 LINK CD CD A 101 SG CYS A 53 1555 1555 2.60 LINK CD CD A 102 SG CYS A 42 1555 1555 2.29 LINK CD CD A 102 SG CYS A 46 1555 1555 2.52 LINK CD CD A 102 SG CYS A 49 1555 1555 2.60 LINK CD CD A 102 SG CYS A 65 1555 1555 2.62 LINK CD CD A 103 SG CYS A 39 1555 1555 2.34 LINK CD CD A 103 SG CYS A 41 1555 1555 2.27 LINK CD CD A 103 SG CYS A 55 1555 1555 2.60 LINK CD CD A 103 SG CYS A 42 1555 1555 2.62 LINK CD CD A 104 SG CYS A 55 1555 1555 2.55 LINK CD CD A 104 SG CYS A 60 1555 1555 2.50 LINK CD CD A 104 SG CYS A 64 1555 1555 2.30 LINK CD CD A 104 SG CYS A 65 1555 1555 2.60 SITE 1 AC1 5 CYS A 38 CYS A 39 CYS A 49 CYS A 53 SITE 2 AC1 5 CYS A 55 SITE 1 AC2 5 CYS A 42 CYS A 46 CYS A 49 CYS A 55 SITE 2 AC2 5 CYS A 65 SITE 1 AC3 4 CYS A 39 CYS A 41 CYS A 42 CYS A 55 SITE 1 AC4 4 CYS A 55 CYS A 60 CYS A 64 CYS A 65 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL MASTER 267 0 4 2 0 0 6 6 0 0 0 3 END