HEADER ISOMERASE 28-MAY-02 1LVH TITLE THE STRUCTURE OF PHOSPHORYLATED BETA-PHOSPHOGLUCOMUTASE FROM TITLE 2 LACTOCCOCUS LACTIS TO 2.3 ANGSTROM RESOLUTION CAVEAT 1LVH LEU A 9 HAS WRONG CHIRALITY AT ATOM CA COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-PHOSPHOGLUCOMUTASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 5.4.2.6; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LACTOCOCCUS LACTIS; SOURCE 3 ORGANISM_TAXID: 1358; SOURCE 4 GENE: PGMB; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET3A KEYWDS HAD SUPERFAMILY, PHOSPHOASPARTATE, ASPARTYLPHOSPHATE, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.D.LAHIRI,G.ZHANG,D.DUNAWAY-MARIANO,K.N.ALLEN REVDAT 3 20-NOV-19 1LVH 1 CAVEAT SEQADV LINK REVDAT 2 24-FEB-09 1LVH 1 VERSN REVDAT 1 14-AUG-02 1LVH 0 JRNL AUTH S.D.LAHIRI,G.ZHANG,D.DUNAWAY-MARIANO,K.N.ALLEN JRNL TITL CAUGHT IN THE ACT: THE STRUCTURE OF PHOSPHORYLATED JRNL TITL 2 BETA-PHOSPHOGLUCOMUTASE FROM LACTOCOCCUS LACTIS. JRNL REF BIOCHEMISTRY V. 41 8351 2002 JRNL REFN ISSN 0006-2960 JRNL PMID 12081483 JRNL DOI 10.1021/BI0202373 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH S.D.LAHIRI,G.ZHANG,P.RADSTROM,D.DUNAWAY-MARIANO,K.N.ALLEN REMARK 1 TITL CRYSTALLIZATION AND PRELIMINARY X-RAY DIFFRACTION STUDIES OF REMARK 1 TITL 2 BETA-PHOSPHOGLUCOMUTASE FROM LACTOCOCCUS LACTUS REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 58 324 2002 REMARK 1 REFN ISSN 0907-4449 REMARK 1 DOI 10.1107/S0907444901019989 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.89 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 94.8 REMARK 3 NUMBER OF REFLECTIONS : 24135 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.244 REMARK 3 FREE R VALUE : 0.286 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 2390 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.44 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 81.00 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2550 REMARK 3 BIN FREE R VALUE : 0.3180 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 333 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.017 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3424 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 259 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.96000 REMARK 3 B22 (A**2) : 12.45000 REMARK 3 B33 (A**2) : -13.41000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.31 REMARK 3 ESD FROM SIGMAA (A) : 0.20 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.38 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.31 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.20 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.780 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : ANISOTROPIC REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 MAXIMUM LIKELIHOOD TARGET USING AMPLITUDES REMARK 3 AND PHASE PROBABILITY DISTRIBUTIONS REMARK 4 REMARK 4 1LVH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-JUN-02. REMARK 100 THE DEPOSITION ID IS D_1000016314. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-MAR-01 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : 6.1 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 14-BM-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792369, 0.9790073, 0.96112713 REMARK 200 MONOCHROMATOR : SI(111) DOUBLE-CRYSTAL REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : BENT CYLINDRICAL SI-MIRROR (RH REMARK 200 COATING) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25469 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.0 REMARK 200 DATA REDUNDANCY : 16.50 REMARK 200 R MERGE (I) : 0.08100 REMARK 200 R SYM (I) : 0.08100 REMARK 200 FOR THE DATA SET : 12.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 60.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.19100 REMARK 200 R SYM FOR SHELL (I) : 0.19100 REMARK 200 FOR SHELL : 3.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.85 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 16% PEG 3350, 0.15M AMMONIUM FLORIDE, REMARK 280 PH 6.1, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 26.83350 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.79850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 46.38800 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 55.79850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.83350 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 46.38800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A MONOMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD2 ASP A 203 OD2 ASP B 203 3645 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 LEU A 9 N LEU A 9 CA 0.188 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PHD A 8 O - C - N ANGL. DEV. = -11.5 DEGREES REMARK 500 LEU A 9 N - CA - CB ANGL. DEV. = 18.3 DEGREES REMARK 500 ASP A 203 CB - CG - OD2 ANGL. DEV. = 5.4 DEGREES REMARK 500 ASP B 203 CB - CG - OD1 ANGL. DEV. = -6.4 DEGREES REMARK 500 ASP B 203 CB - CG - OD2 ANGL. DEV. = 5.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 12 -64.19 -120.40 REMARK 500 GLN A 39 -54.74 -179.54 REMARK 500 LYS A 145 -64.57 -16.96 REMARK 500 GLN A 218 2.39 -63.68 REMARK 500 GLN A 220 88.24 -48.73 REMARK 500 VAL B 12 -56.94 -126.20 REMARK 500 THR B 14 177.29 177.78 REMARK 500 PRO B 138 1.31 -66.97 REMARK 500 LYS B 145 -57.51 -20.71 REMARK 500 LYS B 219 64.13 15.98 REMARK 500 GLN B 220 -169.52 43.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 801 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PHD A 8 OD2 REMARK 620 2 PHD A 8 OP3 80.9 REMARK 620 3 ASP A 10 O 77.9 88.6 REMARK 620 4 ASP A 170 OD1 95.1 176.0 90.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 800 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PHD B 8 OD2 REMARK 620 2 PHD B 8 OP1 86.5 REMARK 620 3 ASP B 10 O 94.3 94.1 REMARK 620 4 GLU B 169 OE1 66.5 105.1 151.4 REMARK 620 5 ASP B 170 OD1 92.7 176.3 89.5 71.4 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 800 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 801 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1FEZ RELATED DB: PDB REMARK 900 PHOSPHONATASE, ANOTHER HALOACID DEHALOGENASE (HAD) SUPERFAMILY REMARK 900 MEMBER DBREF 1LVH A 1 221 UNP P71447 PGMB_LACLA 1 221 DBREF 1LVH B 1 221 UNP P71447 PGMB_LACLA 1 221 SEQADV 1LVH PHD A 8 UNP P71447 ASP 8 MODIFIED RESIDUE SEQADV 1LVH PHD B 8 UNP P71447 ASP 8 MODIFIED RESIDUE SEQRES 1 A 221 MET PHE LYS ALA VAL LEU PHE PHD LEU ASP GLY VAL ILE SEQRES 2 A 221 THR ASP THR ALA GLU TYR HIS PHE ARG ALA TRP LYS ALA SEQRES 3 A 221 LEU ALA GLU GLU ILE GLY ILE ASN GLY VAL ASP ARG GLN SEQRES 4 A 221 PHE ASN GLU GLN LEU LYS GLY VAL SER ARG GLU ASP SER SEQRES 5 A 221 LEU GLN LYS ILE LEU ASP LEU ALA ASP LYS LYS VAL SER SEQRES 6 A 221 ALA GLU GLU PHE LYS GLU LEU ALA LYS ARG LYS ASN ASP SEQRES 7 A 221 ASN TYR VAL LYS MET ILE GLN ASP VAL SER PRO ALA ASP SEQRES 8 A 221 VAL TYR PRO GLY ILE LEU GLN LEU LEU LYS ASP LEU ARG SEQRES 9 A 221 SER ASN LYS ILE LYS ILE ALA LEU ALA SER ALA SER LYS SEQRES 10 A 221 ASN GLY PRO PHE LEU LEU GLU ARG MET ASN LEU THR GLY SEQRES 11 A 221 TYR PHE ASP ALA ILE ALA ASP PRO ALA GLU VAL ALA ALA SEQRES 12 A 221 SER LYS PRO ALA PRO ASP ILE PHE ILE ALA ALA ALA HIS SEQRES 13 A 221 ALA VAL GLY VAL ALA PRO SER GLU SER ILE GLY LEU GLU SEQRES 14 A 221 ASP SER GLN ALA GLY ILE GLN ALA ILE LYS ASP SER GLY SEQRES 15 A 221 ALA LEU PRO ILE GLY VAL GLY ARG PRO GLU ASP LEU GLY SEQRES 16 A 221 ASP ASP ILE VAL ILE VAL PRO ASP THR SER HIS TYR THR SEQRES 17 A 221 LEU GLU PHE LEU LYS GLU VAL TRP LEU GLN LYS GLN LYS SEQRES 1 B 221 MET PHE LYS ALA VAL LEU PHE PHD LEU ASP GLY VAL ILE SEQRES 2 B 221 THR ASP THR ALA GLU TYR HIS PHE ARG ALA TRP LYS ALA SEQRES 3 B 221 LEU ALA GLU GLU ILE GLY ILE ASN GLY VAL ASP ARG GLN SEQRES 4 B 221 PHE ASN GLU GLN LEU LYS GLY VAL SER ARG GLU ASP SER SEQRES 5 B 221 LEU GLN LYS ILE LEU ASP LEU ALA ASP LYS LYS VAL SER SEQRES 6 B 221 ALA GLU GLU PHE LYS GLU LEU ALA LYS ARG LYS ASN ASP SEQRES 7 B 221 ASN TYR VAL LYS MET ILE GLN ASP VAL SER PRO ALA ASP SEQRES 8 B 221 VAL TYR PRO GLY ILE LEU GLN LEU LEU LYS ASP LEU ARG SEQRES 9 B 221 SER ASN LYS ILE LYS ILE ALA LEU ALA SER ALA SER LYS SEQRES 10 B 221 ASN GLY PRO PHE LEU LEU GLU ARG MET ASN LEU THR GLY SEQRES 11 B 221 TYR PHE ASP ALA ILE ALA ASP PRO ALA GLU VAL ALA ALA SEQRES 12 B 221 SER LYS PRO ALA PRO ASP ILE PHE ILE ALA ALA ALA HIS SEQRES 13 B 221 ALA VAL GLY VAL ALA PRO SER GLU SER ILE GLY LEU GLU SEQRES 14 B 221 ASP SER GLN ALA GLY ILE GLN ALA ILE LYS ASP SER GLY SEQRES 15 B 221 ALA LEU PRO ILE GLY VAL GLY ARG PRO GLU ASP LEU GLY SEQRES 16 B 221 ASP ASP ILE VAL ILE VAL PRO ASP THR SER HIS TYR THR SEQRES 17 B 221 LEU GLU PHE LEU LYS GLU VAL TRP LEU GLN LYS GLN LYS MODRES 1LVH PHD A 8 ASP ASPARTYL PHOSPHATE MODRES 1LVH PHD B 8 ASP ASPARTYL PHOSPHATE HET PHD A 8 12 HET PHD B 8 12 HET MG A 801 1 HET MG B 800 1 HETNAM PHD ASPARTYL PHOSPHATE HETNAM MG MAGNESIUM ION FORMUL 1 PHD 2(C4 H8 N O7 P) FORMUL 3 MG 2(MG 2+) FORMUL 5 HOH *259(H2 O) HELIX 1 1 THR A 16 ILE A 31 1 16 HELIX 2 2 PHE A 40 LYS A 45 5 6 HELIX 3 3 SER A 48 ASP A 58 1 11 HELIX 4 4 SER A 65 ILE A 84 1 20 HELIX 5 5 GLN A 85 VAL A 87 5 3 HELIX 6 6 SER A 88 VAL A 92 5 5 HELIX 7 7 GLY A 95 ASN A 106 1 12 HELIX 8 8 ASN A 118 MET A 126 1 9 HELIX 9 9 LEU A 128 PHE A 132 5 5 HELIX 10 10 ASP A 137 VAL A 141 5 5 HELIX 11 11 PRO A 148 VAL A 158 1 11 HELIX 12 12 ALA A 161 SER A 163 5 3 HELIX 13 13 SER A 171 GLY A 182 1 12 HELIX 14 14 ARG A 190 GLY A 195 1 6 HELIX 15 15 ASP A 203 TYR A 207 5 5 HELIX 16 16 THR A 208 GLN A 218 1 11 HELIX 17 17 THR B 16 GLU B 30 1 15 HELIX 18 18 ASP B 37 GLN B 43 1 7 HELIX 19 19 SER B 48 ASP B 58 1 11 HELIX 20 20 SER B 65 GLN B 85 1 21 HELIX 21 21 ASP B 86 VAL B 87 5 2 HELIX 22 22 SER B 88 VAL B 92 5 5 HELIX 23 23 GLY B 95 ASN B 106 1 12 HELIX 24 24 ASN B 118 MET B 126 1 9 HELIX 25 25 LEU B 128 PHE B 132 5 5 HELIX 26 26 PRO B 148 ALA B 157 1 10 HELIX 27 27 ALA B 161 SER B 163 5 3 HELIX 28 28 SER B 171 GLY B 182 1 12 HELIX 29 29 ARG B 190 GLY B 195 1 6 HELIX 30 30 ASP B 203 TYR B 207 5 5 HELIX 31 31 THR B 208 GLN B 218 1 11 SHEET 1 A 6 ALA A 134 ILE A 135 0 SHEET 2 A 6 LYS A 109 LEU A 112 1 N LEU A 112 O ALA A 134 SHEET 3 A 6 ALA A 4 PHE A 7 1 N PHE A 7 O ALA A 111 SHEET 4 A 6 SER A 165 GLU A 169 1 O ILE A 166 N LEU A 6 SHEET 5 A 6 LEU A 184 VAL A 188 1 O LEU A 184 N GLY A 167 SHEET 6 A 6 VAL A 199 VAL A 201 1 O VAL A 201 N GLY A 187 SHEET 1 B 6 ALA B 134 ILE B 135 0 SHEET 2 B 6 LYS B 109 LEU B 112 1 N LEU B 112 O ALA B 134 SHEET 3 B 6 ALA B 4 PHE B 7 1 N PHE B 7 O ALA B 111 SHEET 4 B 6 SER B 165 GLU B 169 1 O ILE B 166 N LEU B 6 SHEET 5 B 6 LEU B 184 VAL B 188 1 O LEU B 184 N GLY B 167 SHEET 6 B 6 VAL B 199 VAL B 201 1 O VAL B 201 N GLY B 187 LINK C PHE A 7 N PHD A 8 1555 1555 1.30 LINK C PHD A 8 N LEU A 9 1555 1555 1.28 LINK OD2 PHD A 8 MG MG A 801 1555 1555 1.98 LINK OP3 PHD A 8 MG MG A 801 1555 1555 2.26 LINK O ASP A 10 MG MG A 801 1555 1555 2.03 LINK OD1 ASP A 170 MG MG A 801 1555 1555 1.84 LINK C PHE B 7 N PHD B 8 1555 1555 1.24 LINK OD2 PHD B 8 MG MG B 800 1555 1555 1.90 LINK OP1 PHD B 8 MG MG B 800 1555 1555 2.12 LINK O ASP B 10 MG MG B 800 1555 1555 1.93 LINK OE1 GLU B 169 MG MG B 800 1555 1555 2.98 LINK OD1 ASP B 170 MG MG B 800 1555 1555 1.93 SITE 1 AC1 4 PHD B 8 ASP B 10 GLU B 169 ASP B 170 SITE 1 AC2 3 PHD A 8 ASP A 10 ASP A 170 CRYST1 53.667 92.776 111.597 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018633 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010779 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008961 0.00000 MASTER 354 0 4 31 12 0 2 6 0 0 0 34 END