HEADER TRANSFERASE 11-MAY-02 1LQO TITLE CRYSTAL STRUTCURE OF THE FOSFOMYCIN RESISTANCE PROTEIN A TITLE 2 (FOSA) CONTAINING BOUND THALLIUM CATIONS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROBABLE FOSFOMYCIN RESISTANCE PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: FOSA; COMPND 5 EC: 2.5.1.18; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 GENE: FOSA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21-DE3; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-20 KEYWDS MANGANESE BINDING, THALLIUM BINDING LOOP, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR C.L.RIFE,R.E.PHARRIS,M.E.NEWCOMER,R.N.ARMSTRONG REVDAT 4 24-FEB-09 1LQO 1 VERSN REVDAT 3 13-MAY-03 1LQO 1 TITLE REMARK REVDAT 2 11-DEC-02 1LQO 1 JRNL REVDAT 1 11-SEP-02 1LQO 0 JRNL AUTH C.L.RIFE,R.E.PHARRIS,M.E.NEWCOMER,R.N.ARMSTRONG JRNL TITL CRYSTAL STRUCTURE OF A GENOMICALLY ENCODED JRNL TITL 2 FOSFOMYCIN RESISTANCE PROTEIN (FOSA) AT 1.19 A JRNL TITL 3 RESOLUTION BY MAD PHASING OFF THE L-III EDGE OF JRNL TITL 4 TL(+) JRNL REF J.AM.CHEM.SOC. V. 124 11001 2002 JRNL REFN ISSN 0002-7863 JRNL PMID 12224946 JRNL DOI 10.1021/JA026879V REMARK 1 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.8 REMARK 3 NUMBER OF REFLECTIONS : 17952 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 966 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1077 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2050 REMARK 3 BIN FREE R VALUE SET COUNT : 62 REMARK 3 BIN FREE R VALUE : 0.2530 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2130 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 28 REMARK 3 SOLVENT ATOMS : 126 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.18 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.08000 REMARK 3 B22 (A**2) : 2.06000 REMARK 3 B33 (A**2) : -1.98000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.208 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.186 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.670 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.786 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.940 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.907 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2209 ; 0.019 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 1948 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2999 ; 2.342 ; 1.941 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4459 ; 0.880 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 270 ; 4.734 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 335 ;13.745 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 297 ; 0.114 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2544 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 548 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 492 ; 0.284 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1870 ; 0.220 ; 0.300 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 2 ; 0.451 ; 0.500 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 173 ; 0.177 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): 1 ; 0.249 ; 0.500 REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 23 ; 0.337 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): 65 ; 0.307 ; 0.300 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 12 ; 0.327 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): 1 ; 0.161 ; 0.500 REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1332 ; 1.117 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2085 ; 1.928 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 877 ; 2.880 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 914 ; 4.545 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 1LQO COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-MAY-02. REMARK 100 THE RCSB ID CODE IS RCSB016191. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-FEB-02 REMARK 200 TEMPERATURE (KELVIN) : 113 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 14-BM-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9780, 0.9789, 0.9537 REMARK 200 MONOCHROMATOR : SI(111) DOUBLE-CRYSTAL REMARK 200 MONOCHROMATOR, BENT REMARK 200 CYLINDRICAL SI-MIRROR (RH REMARK 200 COATING) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19809 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 200 DATA REDUNDANCY : 10.200 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 25.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.17000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 11.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: WELL CONTAINED 40% PENTAERYTHRITOL REMARK 280 PROPOXYLATE 629, 0.08M K2HPO4. DROP CONTAINED 0.002 M MNCL2, REMARK 280 0.002M FOSFOMYCIN, 10 MG/ML FOSA, PH 7.0, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.89850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 38.47900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.93700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 38.47900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.89850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 32.93700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A DIMER CONSISTING OF CHAINS REMARK 300 A AND B. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6870 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12270 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -95.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 135 REMARK 465 ASP B 135 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR A 62 O4 PO4 A 302 1.83 REMARK 500 OH TYR B 62 NZ LYS B 90 1.94 REMARK 500 O1 PO4 A 301 O1 PO4 A 302 2.02 REMARK 500 O3 PO4 B 201 O2 PO4 A 202 2.04 REMARK 500 O3 PO4 A 301 O4 PO4 A 302 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NE2 GLN B 54 O ALA B 126 3655 1.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 24 CB - CG - OD2 ANGL. DEV. = 6.6 DEGREES REMARK 500 ASP A 103 CB - CG - OD1 ANGL. DEV. = 6.9 DEGREES REMARK 500 PRO B 53 N - CA - C ANGL. DEV. = -27.3 DEGREES REMARK 500 GLU B 52 CA - C - N ANGL. DEV. = 21.3 DEGREES REMARK 500 GLU B 52 O - C - N ANGL. DEV. = -17.6 DEGREES REMARK 500 PRO B 53 C - N - CA ANGL. DEV. = 40.4 DEGREES REMARK 500 PRO B 53 C - N - CD ANGL. DEV. = -49.4 DEGREES REMARK 500 ASP B 115 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU B 52 72.63 -158.08 REMARK 500 PRO B 53 -92.69 179.76 REMARK 500 GLN B 54 12.38 -49.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 GLU B 52 13.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 402 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 64 NE2 REMARK 620 2 GLU A 110 OE1 89.1 REMARK 620 3 HIS B 7 NE2 115.9 91.0 REMARK 620 4 PO4 A 301 O3 109.8 98.0 133.6 REMARK 620 5 PO4 A 302 O2 92.3 172.3 81.6 88.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 TL A 501 TL REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PO4 A 202 O3 REMARK 620 2 PO4 A 202 O4 55.7 REMARK 620 3 PO4 B 201 O3 61.1 66.0 REMARK 620 4 HIS A 7 NE2 112.0 57.3 100.3 REMARK 620 5 CYS A 48 SG 72.5 89.2 133.6 97.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 TL A 602 TL REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 92 OD1 REMARK 620 2 GLY A 96 O 88.1 REMARK 620 3 SER A 94 O 73.2 70.3 REMARK 620 4 GLU A 95 O 133.5 64.0 62.9 REMARK 620 5 SER A 94 OG 94.6 137.5 70.0 84.7 REMARK 620 6 SER A 98 OG 93.1 83.4 150.4 117.6 138.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 401 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PO4 A 202 O4 REMARK 620 2 GLU B 110 OE1 174.2 REMARK 620 3 HIS B 64 NE2 89.1 92.2 REMARK 620 4 HIS A 7 NE2 78.5 95.9 115.6 REMARK 620 5 PO4 B 201 O1 80.6 104.0 112.1 127.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 TL B 502 TL REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER B 94 O REMARK 620 2 GLU B 95 O 63.1 REMARK 620 3 GLY B 96 O 69.4 60.4 REMARK 620 4 ASN B 92 OD1 70.8 131.5 90.4 REMARK 620 5 SER B 98 OG 149.1 119.3 85.2 93.0 REMARK 620 6 SER B 94 OG 71.2 94.0 139.6 84.5 135.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 TL B 601 TL REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PO4 A 301 O1 REMARK 620 2 PO4 A 302 O2 53.8 REMARK 620 3 PO4 A 302 O1 48.2 53.3 REMARK 620 4 HIS B 7 NE2 90.6 59.4 112.7 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 201 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 202 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 301 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 302 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 401 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 402 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TL A 501 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TL B 502 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TL B 601 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TL A 602 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TL A 701 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TL B 702 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1LQK RELATED DB: PDB REMARK 900 1LQK IS THE HIGH RESOLUTION STRUCTURE OF THE FOSFOMYCIN REMARK 900 RESISTANCE PROTEIN A WITH BOUND PHOSPHATE. REMARK 900 RELATED ID: 1LQP RELATED DB: PDB REMARK 900 1LQP IS THE STRUCTURE OF THE FOSFOMYCIN RESISTANCE PROTEIN REMARK 900 A WITH BOUND FOSFOMYCIN. DBREF 1LQO A 1 135 UNP Q9I4K6 FOSA_PSEAE 1 135 DBREF 1LQO B 1 135 UNP Q9I4K6 FOSA_PSEAE 1 135 SEQRES 1 A 135 MET LEU THR GLY LEU ASN HIS LEU THR LEU ALA VAL ALA SEQRES 2 A 135 ASP LEU PRO ALA SER ILE ALA PHE TYR ARG ASP LEU LEU SEQRES 3 A 135 GLY PHE ARG LEU GLU ALA ARG TRP ASP GLN GLY ALA TYR SEQRES 4 A 135 LEU GLU LEU GLY SER LEU TRP LEU CYS LEU SER ARG GLU SEQRES 5 A 135 PRO GLN TYR GLY GLY PRO ALA ALA ASP TYR THR HIS TYR SEQRES 6 A 135 ALA PHE GLY ILE ALA ALA ALA ASP PHE ALA ARG PHE ALA SEQRES 7 A 135 ALA GLN LEU ARG ALA HIS GLY VAL ARG GLU TRP LYS GLN SEQRES 8 A 135 ASN ARG SER GLU GLY ASP SER PHE TYR PHE LEU ASP PRO SEQRES 9 A 135 ASP GLY HIS ARG LEU GLU ALA HIS VAL GLY ASP LEU ARG SEQRES 10 A 135 SER ARG LEU ALA ALA CYS ARG GLN ALA PRO TYR ALA GLY SEQRES 11 A 135 MET ARG PHE ALA ASP SEQRES 1 B 135 MET LEU THR GLY LEU ASN HIS LEU THR LEU ALA VAL ALA SEQRES 2 B 135 ASP LEU PRO ALA SER ILE ALA PHE TYR ARG ASP LEU LEU SEQRES 3 B 135 GLY PHE ARG LEU GLU ALA ARG TRP ASP GLN GLY ALA TYR SEQRES 4 B 135 LEU GLU LEU GLY SER LEU TRP LEU CYS LEU SER ARG GLU SEQRES 5 B 135 PRO GLN TYR GLY GLY PRO ALA ALA ASP TYR THR HIS TYR SEQRES 6 B 135 ALA PHE GLY ILE ALA ALA ALA ASP PHE ALA ARG PHE ALA SEQRES 7 B 135 ALA GLN LEU ARG ALA HIS GLY VAL ARG GLU TRP LYS GLN SEQRES 8 B 135 ASN ARG SER GLU GLY ASP SER PHE TYR PHE LEU ASP PRO SEQRES 9 B 135 ASP GLY HIS ARG LEU GLU ALA HIS VAL GLY ASP LEU ARG SEQRES 10 B 135 SER ARG LEU ALA ALA CYS ARG GLN ALA PRO TYR ALA GLY SEQRES 11 B 135 MET ARG PHE ALA ASP HET PO4 B 201 5 HET PO4 A 202 5 HET PO4 A 301 5 HET PO4 A 302 5 HET MN B 401 1 HET MN A 402 1 HET TL A 501 1 HET TL B 502 1 HET TL B 601 1 HET TL A 602 1 HET TL A 701 1 HET TL B 702 1 HETNAM PO4 PHOSPHATE ION HETNAM MN MANGANESE (II) ION HETNAM TL THALLIUM (I) ION FORMUL 3 PO4 4(O4 P 3-) FORMUL 7 MN 2(MN 2+) FORMUL 9 TL 6(TL 1+) FORMUL 15 HOH *126(H2 O) HELIX 1 1 ASP A 14 LEU A 25 1 12 HELIX 2 2 ASP A 73 HIS A 84 1 12 HELIX 3 3 ASP A 115 ALA A 126 1 12 HELIX 4 4 ASP B 14 LEU B 25 1 12 HELIX 5 5 ASP B 73 HIS B 84 1 12 HELIX 6 6 ASP B 115 ALA B 126 1 12 SHEET 1 A 9 GLU B 88 LYS B 90 0 SHEET 2 A 9 SER B 98 LEU B 102 -1 O TYR B 100 N LYS B 90 SHEET 3 A 9 ARG B 108 HIS B 112 -1 O LEU B 109 N PHE B 101 SHEET 4 A 9 HIS B 64 ILE B 69 1 N PHE B 67 O GLU B 110 SHEET 5 A 9 LEU A 2 VAL A 12 -1 N THR A 9 O HIS B 64 SHEET 6 A 9 LEU A 45 ARG A 51 1 O CYS A 48 N LEU A 8 SHEET 7 A 9 GLY A 37 LEU A 42 -1 N LEU A 40 O LEU A 47 SHEET 8 A 9 ARG A 29 TRP A 34 -1 N ARG A 29 O GLU A 41 SHEET 9 A 9 ARG B 132 PHE B 133 -1 O ARG B 132 N ARG A 33 SHEET 1 B 9 GLU A 88 LYS A 90 0 SHEET 2 B 9 SER A 98 LEU A 102 -1 O TYR A 100 N LYS A 90 SHEET 3 B 9 ARG A 108 HIS A 112 -1 O LEU A 109 N PHE A 101 SHEET 4 B 9 HIS A 64 ILE A 69 1 N PHE A 67 O GLU A 110 SHEET 5 B 9 LEU B 2 VAL B 12 -1 O ASN B 6 N ALA A 66 SHEET 6 B 9 LEU B 45 ARG B 51 1 O SER B 50 N LEU B 10 SHEET 7 B 9 GLY B 37 LEU B 42 -1 N LEU B 40 O LEU B 47 SHEET 8 B 9 ARG B 29 TRP B 34 -1 N TRP B 34 O GLY B 37 SHEET 9 B 9 ARG A 132 PHE A 133 -1 N ARG A 132 O ARG B 33 LINK MN MN A 402 NE2 HIS A 64 1555 1555 2.21 LINK MN MN A 402 OE1 GLU A 110 1555 1555 2.10 LINK MN MN A 402 NE2 HIS B 7 1555 1555 2.35 LINK MN MN A 402 O3 PO4 A 301 1555 1555 1.97 LINK MN MN A 402 O2 PO4 A 302 1555 1555 2.12 LINK TL TL A 501 O3 PO4 A 202 1555 1555 2.46 LINK TL TL A 501 O4 PO4 A 202 1555 1555 2.78 LINK TL TL A 501 O3 PO4 B 201 1555 1555 2.38 LINK TL TL A 501 NE2 HIS A 7 1555 1555 2.98 LINK TL TL A 501 SG CYS A 48 1555 1555 3.26 LINK TL TL A 602 OD1 ASN A 92 1555 1555 2.58 LINK TL TL A 602 O GLY A 96 1555 1555 2.56 LINK TL TL A 602 O SER A 94 1555 1555 3.07 LINK TL TL A 602 O GLU A 95 1555 1555 2.92 LINK TL TL A 602 OG SER A 94 1555 1555 2.80 LINK TL TL A 602 OG SER A 98 1555 1555 2.82 LINK MN MN B 401 O4 PO4 A 202 1555 1555 2.13 LINK MN MN B 401 OE1 GLU B 110 1555 1555 2.09 LINK MN MN B 401 NE2 HIS B 64 1555 1555 2.19 LINK MN MN B 401 NE2 HIS A 7 1555 1555 2.24 LINK MN MN B 401 O1 PO4 B 201 1555 1555 2.20 LINK TL TL B 502 O SER B 94 1555 1555 2.83 LINK TL TL B 502 O GLU B 95 1555 1555 3.04 LINK TL TL B 502 O GLY B 96 1555 1555 2.85 LINK TL TL B 502 OD1 ASN B 92 1555 1555 2.59 LINK TL TL B 502 OG SER B 98 1555 1555 2.89 LINK TL TL B 502 OG SER B 94 1555 1555 2.45 LINK TL TL B 601 O1 PO4 A 301 1555 1555 1.96 LINK TL TL B 601 O2 PO4 A 302 1555 1555 2.72 LINK TL TL B 601 O1 PO4 A 302 1555 1555 2.70 LINK TL TL B 601 NE2 HIS B 7 1555 1555 3.14 LINK TL TL B 702 OG SER A 50 1555 1555 3.09 CISPEP 1 GLU B 52 PRO B 53 0 -18.85 SITE 1 AC1 9 PO4 A 202 TL A 501 HIS B 64 SER B 94 SITE 2 AC1 9 TYR B 100 GLU B 110 ARG B 119 MN B 401 SITE 3 AC1 9 TL B 502 SITE 1 AC2 11 HIS A 7 THR A 9 TYR A 39 CYS A 48 SITE 2 AC2 11 TL A 501 HOH A 738 HOH A 753 TYR B 62 SITE 3 AC2 11 HIS B 64 PO4 B 201 MN B 401 SITE 1 AC3 10 TYR A 62 HIS A 64 SER A 94 TYR A 100 SITE 2 AC3 10 GLU A 110 ARG A 119 PO4 A 302 MN A 402 SITE 3 AC3 10 TL A 602 TL B 601 SITE 1 AC4 11 TYR A 62 HIS A 64 LYS A 90 PO4 A 301 SITE 2 AC4 11 MN A 402 HOH A 749 HOH A 768 HIS B 7 SITE 3 AC4 11 THR B 9 CYS B 48 TL B 601 SITE 1 AC5 5 HIS A 7 PO4 A 202 HIS B 64 GLU B 110 SITE 2 AC5 5 PO4 B 201 SITE 1 AC6 5 HIS A 64 GLU A 110 PO4 A 301 PO4 A 302 SITE 2 AC6 5 HIS B 7 SITE 1 AC7 6 HIS A 7 TRP A 46 CYS A 48 PO4 A 202 SITE 2 AC7 6 ARG B 119 PO4 B 201 SITE 1 AC8 7 ASN B 92 SER B 94 GLU B 95 GLY B 96 SITE 2 AC8 7 SER B 98 TYR B 100 PO4 B 201 SITE 1 AC9 6 ARG A 119 PO4 A 301 PO4 A 302 HIS B 7 SITE 2 AC9 6 TRP B 46 CYS B 48 SITE 1 BC1 8 ASN A 92 SER A 94 GLU A 95 GLY A 96 SITE 2 BC1 8 SER A 98 TYR A 100 HIS A 112 PO4 A 301 SITE 1 BC2 2 SER A 44 SER B 44 SITE 1 BC3 2 SER A 50 TYR B 62 CRYST1 55.797 65.874 76.958 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017922 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015180 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012994 0.00000 MASTER 454 0 12 6 18 0 26 6 0 0 0 22 END