HEADER OXIDOREDUCTASE 04-SEP-01 1JWJ TITLE MURINE INDUCIBLE NITRIC OXIDE SYNTHASE OXYGENASE DIMER (DELTA 65) WITH TITLE 2 W457F MUTATION AT TETRAHYDROBIOPTERIN BINDING SITE COMPND MOL_ID: 1; COMPND 2 MOLECULE: NITRIC OXIDE SYNTHASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: OXYGENASE DOMAIN 65-498; COMPND 5 SYNONYM: NOS, TYPE II, INDUCIBLE NOS, INOS, MACROPHAGE NOS, MAC-NOS; COMPND 6 EC: 1.14.13.39; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PCWORI KEYWDS NITRIC OXIDE L-ARGININE MONOOXYGENASE, HEME, DIMER, NOS, KEYWDS 2 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR M.AOYAGI,A.S.ARVAI,S.GHOSH,D.J.STUEHR,J.A.TAINER,E.D.GETZOFF REVDAT 5 27-OCT-21 1JWJ 1 SEQADV HETSYN REVDAT 4 29-JUL-20 1JWJ 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE REVDAT 3 13-JUL-11 1JWJ 1 VERSN REVDAT 2 24-FEB-09 1JWJ 1 VERSN REVDAT 1 31-OCT-01 1JWJ 0 JRNL AUTH M.AOYAGI,A.S.ARVAI,S.GHOSH,D.J.STUEHR,J.A.TAINER,E.D.GETZOFF JRNL TITL STRUCTURES OF TETRAHYDROBIOPTERIN BINDING-SITE MUTANTS OF JRNL TITL 2 INDUCIBLE NITRIC OXIDE SYNTHASE OXYGENASE DIMER AND JRNL TITL 3 IMPLICATED ROLES OF TRP457. JRNL REF BIOCHEMISTRY V. 40 12826 2001 JRNL REFN ISSN 0006-2960 JRNL PMID 11669619 JRNL DOI 10.1021/BI011183K REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH Z.-Q.WANG,C.-C.WEI,S.GHOSH,A.MEADE,C.HEMANN,R.HILLE, REMARK 1 AUTH 2 D.J.STUEHR REMARK 1 TITL A CONSERVED TRYPTOPHAN IN NITRIC OXIDE SYNTHASE REGULATES REMARK 1 TITL 2 HEME-DIOXY REDUCTION BY TETRAHYDROBIOPTERIN REMARK 1 REF BIOCHEMISTRY V. 40 12819 2001 REMARK 1 REFN ISSN 0006-2960 REMARK 1 DOI 10.1021/BI011182S REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.41 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 769561.580 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 96.9 REMARK 3 NUMBER OF REFLECTIONS : 46989 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.257 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2362 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.005 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.76 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 86.30 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 6526 REMARK 3 BIN R VALUE (WORKING SET) : 0.3570 REMARK 3 BIN FREE R VALUE : 0.3830 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 340 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.021 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6698 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 222 REMARK 3 SOLVENT ATOMS : 332 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -9.52000 REMARK 3 B22 (A**2) : -9.52000 REMARK 3 B33 (A**2) : 19.03000 REMARK 3 B12 (A**2) : 2.48000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.33 REMARK 3 ESD FROM SIGMAA (A) : 0.54 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.40 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.59 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.00 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.180 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.240 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.110 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.910 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.990 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.32 REMARK 3 BSOL : 24.94 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1JWJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-SEP-01. REMARK 100 THE DEPOSITION ID IS D_1000014266. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-SEP-99 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 14-BM-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46998 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 4.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 200 DATA REDUNDANCY : 3.040 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07000 REMARK 200 FOR THE DATA SET : 15.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.45000 REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: 1NOD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.98 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE, PH 5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 38.96400 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 77.92800 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 58.44600 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 97.41000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 19.48200 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 38.96400 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 77.92800 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 97.41000 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 58.44600 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 19.48200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A DIMER GENERATED FROM EACH REMARK 300 SUBUNIT, A AND B, IN THE ASYMMETRIC UNIT BY THE OPERATIONS 1+Y-X, Y, REMARK 300 1/2-Z AND 2-X, 1-X+Y, 2/3-Z+5/3. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 10390 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34190 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -65.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 213.60300 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 58.44600 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 11820 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -59.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 320.40450 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 184.98562 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 194.82000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 66 REMARK 465 ASP A 67 REMARK 465 LYS A 68 REMARK 465 LEU A 69 REMARK 465 HIS A 70 REMARK 465 VAL A 71 REMARK 465 THR A 72 REMARK 465 SER A 73 REMARK 465 THR A 74 REMARK 465 ARG A 75 REMARK 465 PRO A 76 REMARK 465 SER A 100 REMARK 465 ASP A 101 REMARK 465 PHE A 102 REMARK 465 THR A 103 REMARK 465 CYS A 104 REMARK 465 LYS A 105 REMARK 465 SER A 106 REMARK 465 LYS A 107 REMARK 465 SER A 108 REMARK 465 GLU A 498 REMARK 465 LEU B 66 REMARK 465 ASP B 67 REMARK 465 LYS B 68 REMARK 465 LEU B 69 REMARK 465 HIS B 70 REMARK 465 VAL B 71 REMARK 465 THR B 72 REMARK 465 SER B 73 REMARK 465 THR B 74 REMARK 465 ARG B 75 REMARK 465 PRO B 76 REMARK 465 SER B 100 REMARK 465 ASP B 101 REMARK 465 PHE B 102 REMARK 465 THR B 103 REMARK 465 CYS B 104 REMARK 465 LYS B 105 REMARK 465 SER B 106 REMARK 465 LYS B 107 REMARK 465 SER B 108 REMARK 465 CYS B 109 REMARK 465 GLU B 498 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 77 CG CD OE1 NE2 REMARK 470 ASN A 497 CG OD1 ND2 REMARK 470 GLN B 77 CG CD OE1 NE2 REMARK 470 GLN B 496 CG CD OE1 NE2 REMARK 470 ASN B 497 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 84 -3.43 -59.35 REMARK 500 ASN A 115 69.03 -119.98 REMARK 500 PRO A 127 171.99 -57.68 REMARK 500 ARG A 197 -7.85 -55.03 REMARK 500 SER A 212 -33.31 -141.01 REMARK 500 SER A 245 -77.35 -97.99 REMARK 500 LYS A 329 -50.31 -132.11 REMARK 500 CYS A 361 76.38 -159.40 REMARK 500 ARG A 382 -124.16 -129.12 REMARK 500 THR A 397 4.20 -68.17 REMARK 500 ARG A 448 14.45 -148.15 REMARK 500 CYS A 451 105.70 -166.24 REMARK 500 LEU A 479 -158.93 -89.92 REMARK 500 HIS B 95 -9.18 -56.53 REMARK 500 SER B 112 36.30 -91.79 REMARK 500 LYS B 152 78.70 -111.25 REMARK 500 THR B 172 -175.86 -171.14 REMARK 500 TRP B 200 -37.85 -38.14 REMARK 500 SER B 212 -17.04 -155.31 REMARK 500 SER B 245 -65.20 -104.54 REMARK 500 CYS B 361 80.17 -161.43 REMARK 500 ARG B 382 -117.72 -123.32 REMARK 500 ASN B 384 55.21 36.68 REMARK 500 LEU B 479 -159.15 -96.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 801 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 194 SG REMARK 620 2 HEM A 801 NA 108.7 REMARK 620 3 HEM A 801 NB 91.6 88.4 REMARK 620 4 HEM A 801 NC 89.3 161.8 88.5 REMARK 620 5 HEM A 801 ND 101.5 90.7 166.4 88.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B 901 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 194 SG REMARK 620 2 HEM B 901 NA 110.4 REMARK 620 3 HEM B 901 NB 93.9 87.9 REMARK 620 4 HEM B 901 NC 88.9 160.6 89.3 REMARK 620 5 HEM B 901 ND 101.8 88.7 164.2 88.8 REMARK 620 N 1 2 3 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1JWK RELATED DB: PDB REMARK 900 MURINE INDUCIBLE NITRIC OXIDE SYNTHASE OXYGENASE DIMER (DELTA 65) REMARK 900 WITH W457A MUTATION AT TETRAHYDROBIOPTERIN-BINDING SITE DBREF 1JWJ A 66 498 UNP P29477 NOS2_MOUSE 66 498 DBREF 1JWJ B 66 498 UNP P29477 NOS2_MOUSE 66 498 SEQADV 1JWJ PHE A 457 UNP P29477 TRP 457 ENGINEERED MUTATION SEQADV 1JWJ PHE B 457 UNP P29477 TRP 457 ENGINEERED MUTATION SEQRES 1 A 433 LEU ASP LYS LEU HIS VAL THR SER THR ARG PRO GLN TYR SEQRES 2 A 433 VAL ARG ILE LYS ASN TRP GLY SER GLY GLU ILE LEU HIS SEQRES 3 A 433 ASP THR LEU HIS HIS LYS ALA THR SER ASP PHE THR CYS SEQRES 4 A 433 LYS SER LYS SER CYS LEU GLY SER ILE MET ASN PRO LYS SEQRES 5 A 433 SER LEU THR ARG GLY PRO ARG ASP LYS PRO THR PRO LEU SEQRES 6 A 433 GLU GLU LEU LEU PRO HIS ALA ILE GLU PHE ILE ASN GLN SEQRES 7 A 433 TYR TYR GLY SER PHE LYS GLU ALA LYS ILE GLU GLU HIS SEQRES 8 A 433 LEU ALA ARG LEU GLU ALA VAL THR LYS GLU ILE GLU THR SEQRES 9 A 433 THR GLY THR TYR GLN LEU THR LEU ASP GLU LEU ILE PHE SEQRES 10 A 433 ALA THR LYS MET ALA TRP ARG ASN ALA PRO ARG CYS ILE SEQRES 11 A 433 GLY ARG ILE GLN TRP SER ASN LEU GLN VAL PHE ASP ALA SEQRES 12 A 433 ARG ASN CYS SER THR ALA GLN GLU MET PHE GLN HIS ILE SEQRES 13 A 433 CYS ARG HIS ILE LEU TYR ALA THR ASN ASN GLY ASN ILE SEQRES 14 A 433 ARG SER ALA ILE THR VAL PHE PRO GLN ARG SER ASP GLY SEQRES 15 A 433 LYS HIS ASP PHE ARG LEU TRP ASN SER GLN LEU ILE ARG SEQRES 16 A 433 TYR ALA GLY TYR GLN MET PRO ASP GLY THR ILE ARG GLY SEQRES 17 A 433 ASP ALA ALA THR LEU GLU PHE THR GLN LEU CYS ILE ASP SEQRES 18 A 433 LEU GLY TRP LYS PRO ARG TYR GLY ARG PHE ASP VAL LEU SEQRES 19 A 433 PRO LEU VAL LEU GLN ALA ASP GLY GLN ASP PRO GLU VAL SEQRES 20 A 433 PHE GLU ILE PRO PRO ASP LEU VAL LEU GLU VAL THR MET SEQRES 21 A 433 GLU HIS PRO LYS TYR GLU TRP PHE GLN GLU LEU GLY LEU SEQRES 22 A 433 LYS TRP TYR ALA LEU PRO ALA VAL ALA ASN MET LEU LEU SEQRES 23 A 433 GLU VAL GLY GLY LEU GLU PHE PRO ALA CYS PRO PHE ASN SEQRES 24 A 433 GLY TRP TYR MET GLY THR GLU ILE GLY VAL ARG ASP PHE SEQRES 25 A 433 CYS ASP THR GLN ARG TYR ASN ILE LEU GLU GLU VAL GLY SEQRES 26 A 433 ARG ARG MET GLY LEU GLU THR HIS THR LEU ALA SER LEU SEQRES 27 A 433 TRP LYS ASP ARG ALA VAL THR GLU ILE ASN VAL ALA VAL SEQRES 28 A 433 LEU HIS SER PHE GLN LYS GLN ASN VAL THR ILE MET ASP SEQRES 29 A 433 HIS HIS THR ALA SER GLU SER PHE MET LYS HIS MET GLN SEQRES 30 A 433 ASN GLU TYR ARG ALA ARG GLY GLY CYS PRO ALA ASP TRP SEQRES 31 A 433 ILE PHE LEU VAL PRO PRO VAL SER GLY SER ILE THR PRO SEQRES 32 A 433 VAL PHE HIS GLN GLU MET LEU ASN TYR VAL LEU SER PRO SEQRES 33 A 433 PHE TYR TYR TYR GLN ILE GLU PRO TRP LYS THR HIS ILE SEQRES 34 A 433 TRP GLN ASN GLU SEQRES 1 B 433 LEU ASP LYS LEU HIS VAL THR SER THR ARG PRO GLN TYR SEQRES 2 B 433 VAL ARG ILE LYS ASN TRP GLY SER GLY GLU ILE LEU HIS SEQRES 3 B 433 ASP THR LEU HIS HIS LYS ALA THR SER ASP PHE THR CYS SEQRES 4 B 433 LYS SER LYS SER CYS LEU GLY SER ILE MET ASN PRO LYS SEQRES 5 B 433 SER LEU THR ARG GLY PRO ARG ASP LYS PRO THR PRO LEU SEQRES 6 B 433 GLU GLU LEU LEU PRO HIS ALA ILE GLU PHE ILE ASN GLN SEQRES 7 B 433 TYR TYR GLY SER PHE LYS GLU ALA LYS ILE GLU GLU HIS SEQRES 8 B 433 LEU ALA ARG LEU GLU ALA VAL THR LYS GLU ILE GLU THR SEQRES 9 B 433 THR GLY THR TYR GLN LEU THR LEU ASP GLU LEU ILE PHE SEQRES 10 B 433 ALA THR LYS MET ALA TRP ARG ASN ALA PRO ARG CYS ILE SEQRES 11 B 433 GLY ARG ILE GLN TRP SER ASN LEU GLN VAL PHE ASP ALA SEQRES 12 B 433 ARG ASN CYS SER THR ALA GLN GLU MET PHE GLN HIS ILE SEQRES 13 B 433 CYS ARG HIS ILE LEU TYR ALA THR ASN ASN GLY ASN ILE SEQRES 14 B 433 ARG SER ALA ILE THR VAL PHE PRO GLN ARG SER ASP GLY SEQRES 15 B 433 LYS HIS ASP PHE ARG LEU TRP ASN SER GLN LEU ILE ARG SEQRES 16 B 433 TYR ALA GLY TYR GLN MET PRO ASP GLY THR ILE ARG GLY SEQRES 17 B 433 ASP ALA ALA THR LEU GLU PHE THR GLN LEU CYS ILE ASP SEQRES 18 B 433 LEU GLY TRP LYS PRO ARG TYR GLY ARG PHE ASP VAL LEU SEQRES 19 B 433 PRO LEU VAL LEU GLN ALA ASP GLY GLN ASP PRO GLU VAL SEQRES 20 B 433 PHE GLU ILE PRO PRO ASP LEU VAL LEU GLU VAL THR MET SEQRES 21 B 433 GLU HIS PRO LYS TYR GLU TRP PHE GLN GLU LEU GLY LEU SEQRES 22 B 433 LYS TRP TYR ALA LEU PRO ALA VAL ALA ASN MET LEU LEU SEQRES 23 B 433 GLU VAL GLY GLY LEU GLU PHE PRO ALA CYS PRO PHE ASN SEQRES 24 B 433 GLY TRP TYR MET GLY THR GLU ILE GLY VAL ARG ASP PHE SEQRES 25 B 433 CYS ASP THR GLN ARG TYR ASN ILE LEU GLU GLU VAL GLY SEQRES 26 B 433 ARG ARG MET GLY LEU GLU THR HIS THR LEU ALA SER LEU SEQRES 27 B 433 TRP LYS ASP ARG ALA VAL THR GLU ILE ASN VAL ALA VAL SEQRES 28 B 433 LEU HIS SER PHE GLN LYS GLN ASN VAL THR ILE MET ASP SEQRES 29 B 433 HIS HIS THR ALA SER GLU SER PHE MET LYS HIS MET GLN SEQRES 30 B 433 ASN GLU TYR ARG ALA ARG GLY GLY CYS PRO ALA ASP TRP SEQRES 31 B 433 ILE PHE LEU VAL PRO PRO VAL SER GLY SER ILE THR PRO SEQRES 32 B 433 VAL PHE HIS GLN GLU MET LEU ASN TYR VAL LEU SER PRO SEQRES 33 B 433 PHE TYR TYR TYR GLN ILE GLU PRO TRP LYS THR HIS ILE SEQRES 34 B 433 TRP GLN ASN GLU HET BOG A3000 20 HET HEM A 801 43 HET H4B A 802 17 HET GOL A3102 6 HET GOL A3103 6 HET GOL A3101 6 HET BOG B3100 20 HET HEM B 901 43 HET H4B B 902 17 HET EDO B3112 4 HET EDO B3111 4 HET GOL B3104 6 HET GOL B3105 6 HET GOL B3106 6 HET GOL B3107 6 HET GOL B3108 6 HET GOL B3110 6 HETNAM BOG OCTYL BETA-D-GLUCOPYRANOSIDE HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM H4B 5,6,7,8-TETRAHYDROBIOPTERIN HETNAM GOL GLYCEROL HETNAM EDO 1,2-ETHANEDIOL HETSYN BOG BETA-OCTYLGLUCOSIDE; OCTYL BETA-D-GLUCOSIDE; OCTYL D- HETSYN 2 BOG GLUCOSIDE; OCTYL GLUCOSIDE HETSYN HEM HEME HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 BOG 2(C14 H28 O6) FORMUL 4 HEM 2(C34 H32 FE N4 O4) FORMUL 5 H4B 2(C9 H15 N5 O3) FORMUL 6 GOL 9(C3 H8 O3) FORMUL 12 EDO 2(C2 H6 O2) FORMUL 20 HOH *332(H2 O) HELIX 1 1 THR A 93 ALA A 98 5 6 HELIX 2 2 PRO A 116 THR A 120 5 5 HELIX 3 3 PRO A 129 SER A 147 1 19 HELIX 4 4 LYS A 152 GLY A 171 1 20 HELIX 5 5 THR A 176 ASN A 190 1 15 HELIX 6 6 GLY A 196 TRP A 200 5 5 HELIX 7 7 THR A 213 ASN A 230 1 18 HELIX 8 8 ASN A 231 ASN A 233 5 3 HELIX 9 9 THR A 277 LEU A 287 1 11 HELIX 10 10 PRO A 316 VAL A 320 5 5 HELIX 11 11 TYR A 330 GLY A 337 5 8 HELIX 12 12 MET A 368 VAL A 374 1 7 HELIX 13 13 VAL A 374 ASP A 379 1 6 HELIX 14 14 ILE A 385 GLY A 394 1 10 HELIX 15 15 THR A 399 SER A 402 5 4 HELIX 16 16 LEU A 403 GLN A 423 1 21 HELIX 17 17 ASP A 429 GLY A 449 1 21 HELIX 18 18 ASP A 454 VAL A 459 1 6 HELIX 19 19 SER A 463 GLN A 472 5 10 HELIX 20 20 GLU A 488 HIS A 493 1 6 HELIX 21 21 THR B 93 ALA B 98 5 6 HELIX 22 22 PRO B 116 THR B 120 5 5 HELIX 23 23 PRO B 129 SER B 147 1 19 HELIX 24 24 LYS B 152 GLY B 171 1 20 HELIX 25 25 THR B 176 ASN B 190 1 15 HELIX 26 26 GLY B 196 TRP B 200 5 5 HELIX 27 27 THR B 213 ASN B 230 1 18 HELIX 28 28 ASN B 231 ASN B 233 5 3 HELIX 29 29 THR B 277 LEU B 287 1 11 HELIX 30 30 PRO B 316 VAL B 320 5 5 HELIX 31 31 TYR B 330 GLY B 337 5 8 HELIX 32 32 MET B 368 VAL B 374 1 7 HELIX 33 33 VAL B 374 ASP B 379 1 6 HELIX 34 34 ILE B 385 ARG B 392 1 8 HELIX 35 35 THR B 399 SER B 402 5 4 HELIX 36 36 LEU B 403 GLN B 423 1 21 HELIX 37 37 ASP B 429 GLY B 449 1 21 HELIX 38 38 ASP B 454 VAL B 459 1 6 HELIX 39 39 SER B 463 GLN B 472 5 10 HELIX 40 40 GLU B 488 THR B 492 5 5 SHEET 1 A 2 VAL A 79 LYS A 82 0 SHEET 2 A 2 ILE A 89 ASP A 92 -1 O ASP A 92 N VAL A 79 SHEET 1 B 4 GLN A 204 ASP A 207 0 SHEET 2 B 4 ALA A 237 VAL A 240 1 O ILE A 238 N PHE A 206 SHEET 3 B 4 PHE A 363 ASN A 364 -1 O ASN A 364 N ALA A 237 SHEET 4 B 4 ALA A 345 VAL A 346 -1 N VAL A 346 O PHE A 363 SHEET 1 C 3 ARG A 252 LEU A 253 0 SHEET 2 C 3 LEU A 301 GLN A 304 -1 O GLN A 304 N ARG A 252 SHEET 3 C 3 GLU A 311 PHE A 313 -1 O GLU A 311 N LEU A 303 SHEET 1 D 2 GLY A 263 GLN A 265 0 SHEET 2 D 2 ILE A 271 GLY A 273 -1 O ARG A 272 N TYR A 264 SHEET 1 E 2 GLU A 322 THR A 324 0 SHEET 2 E 2 LYS A 339 TYR A 341 -1 O TRP A 340 N VAL A 323 SHEET 1 F 3 LEU A 356 PHE A 358 0 SHEET 2 F 3 LEU A 350 VAL A 353 -1 N VAL A 353 O LEU A 356 SHEET 3 F 3 PHE A 482 TYR A 484 -1 O TYR A 484 N LEU A 350 SHEET 1 G 2 VAL B 79 LYS B 82 0 SHEET 2 G 2 ILE B 89 ASP B 92 -1 O ASP B 92 N VAL B 79 SHEET 1 H 4 GLN B 204 ASP B 207 0 SHEET 2 H 4 ALA B 237 VAL B 240 1 O ILE B 238 N PHE B 206 SHEET 3 H 4 PHE B 363 ASN B 364 -1 O ASN B 364 N ALA B 237 SHEET 4 H 4 ALA B 345 VAL B 346 -1 N VAL B 346 O PHE B 363 SHEET 1 I 3 ARG B 252 LEU B 253 0 SHEET 2 I 3 LEU B 301 GLN B 304 -1 O GLN B 304 N ARG B 252 SHEET 3 I 3 GLU B 311 PHE B 313 -1 O PHE B 313 N LEU B 301 SHEET 1 J 2 GLY B 263 GLN B 265 0 SHEET 2 J 2 ILE B 271 GLY B 273 -1 O ARG B 272 N TYR B 264 SHEET 1 K 2 GLU B 322 THR B 324 0 SHEET 2 K 2 LYS B 339 TYR B 341 -1 O TRP B 340 N VAL B 323 SHEET 1 L 3 LEU B 356 PHE B 358 0 SHEET 2 L 3 LEU B 350 VAL B 353 -1 N LEU B 351 O PHE B 358 SHEET 3 L 3 PHE B 482 TYR B 484 -1 O PHE B 482 N GLU B 352 LINK SG CYS A 194 FE HEM A 801 1555 1555 2.69 LINK SG CYS B 194 FE HEM B 901 1555 1555 2.67 CISPEP 1 SER A 480 PRO A 481 0 0.11 CISPEP 2 SER B 480 PRO B 481 0 -0.14 CRYST1 213.603 213.603 116.892 90.00 90.00 120.00 P 61 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004682 0.002703 0.000000 0.00000 SCALE2 0.000000 0.005406 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008555 0.00000 MASTER 406 0 17 40 32 0 0 6 0 0 0 68 END