HEADER LIGASE 02-JUL-01 1JIJ TITLE CRYSTAL STRUCTURE OF S. AUREUS TYRRS IN COMPLEX WITH SB-239629 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSYL-TRNA SYNTHETASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: TYROSINE--TRNA LIGASE; TYRRS; TYROSYL-TRANSFER RNA COMPND 5 SYNTHETASE; COMPND 6 EC: 6.1.1.1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 VARIANT: AUREUS N315; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TYROSYL-TRNA SYNTHETASE, STAPHYLOCOCCUS AUREUS, TRUNCATION, STRUCTURE KEYWDS 2 BASED INHIBITOR DESIGN, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR X.QIU,C.A.JANSON,W.W.SMITH,R.L.JARVEST REVDAT 5 04-OCT-17 1JIJ 1 REMARK REVDAT 4 13-JUL-11 1JIJ 1 VERSN REVDAT 3 24-FEB-09 1JIJ 1 VERSN REVDAT 2 01-APR-03 1JIJ 1 JRNL REVDAT 1 26-OCT-01 1JIJ 0 JRNL AUTH X.QIU,C.A.JANSON,W.W.SMITH,S.M.GREEN,P.MCDEVITT,K.JOHANSON, JRNL AUTH 2 P.CARTER,M.HIBBS,C.LEWIS,A.CHALKER,A.FOSBERRY,J.LALONDE, JRNL AUTH 3 J.BERGE,P.BROWN,C.S.HOUGE-FRYDRYCH,R.L.JARVEST JRNL TITL CRYSTAL STRUCTURE OF STAPHYLOCOCCUS AUREUS TYROSYL-TRNA JRNL TITL 2 SYNTHETASE IN COMPLEX WITH A CLASS OF POTENT AND SPECIFIC JRNL TITL 3 INHIBITORS. JRNL REF PROTEIN SCI. V. 10 2008 2001 JRNL REFN ISSN 0961-8368 JRNL PMID 11567092 JRNL DOI 10.1110/PS.18001 REMARK 2 REMARK 2 RESOLUTION. 3.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 6275 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.257 REMARK 3 FREE R VALUE : 0.305 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 310 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2556 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 29 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.900 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1JIJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-JUL-01. REMARK 100 THE DEPOSITION ID IS D_1000013811. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-JUN-96 REMARK 200 TEMPERATURE (KELVIN) : 298 REMARK 200 PH : 7.25 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : AREA DETECTOR REMARK 200 DETECTOR MANUFACTURER : SIEMENS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : X-GEN REMARK 200 DATA SCALING SOFTWARE : X-GEN REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8399 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.200 REMARK 200 RESOLUTION RANGE LOW (A) : 21.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 3.000 REMARK 200 R MERGE (I) : 0.10800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.22 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.00 REMARK 200 R MERGE FOR SHELL (I) : 0.28800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 1000, CACL2, PH 7.25, VAPOR REMARK 280 DIFFUSION, SITTING DROP AT 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 71.57000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 71.57000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 35.04500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 49.46500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 35.04500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 49.46500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 71.57000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 35.04500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 49.46500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 71.57000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 35.04500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 49.46500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A DIMER GENERATED FROM THE REMARK 300 MONOMER IN ASU AND THE OPERATION -X,Y,-Z+1/2 ---- OPERATION 3+1C REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 214.71000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 4670 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -40.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 143.14000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLN A 321 REMARK 465 ALA A 322 REMARK 465 LEU A 323 REMARK 465 PHE A 324 REMARK 465 SER A 325 REMARK 465 GLY A 326 REMARK 465 ASP A 327 REMARK 465 LEU A 328 REMARK 465 LYS A 329 REMARK 465 SER A 330 REMARK 465 LEU A 331 REMARK 465 SER A 332 REMARK 465 ALA A 333 REMARK 465 LYS A 334 REMARK 465 GLU A 335 REMARK 465 LEU A 336 REMARK 465 LYS A 337 REMARK 465 ASP A 338 REMARK 465 GLY A 339 REMARK 465 PHE A 340 REMARK 465 LYS A 341 REMARK 465 ASP A 342 REMARK 465 VAL A 343 REMARK 465 PRO A 344 REMARK 465 GLN A 345 REMARK 465 VAL A 346 REMARK 465 THR A 347 REMARK 465 LEU A 348 REMARK 465 SER A 349 REMARK 465 ASN A 350 REMARK 465 ASP A 351 REMARK 465 THR A 352 REMARK 465 THR A 353 REMARK 465 ASN A 354 REMARK 465 ILE A 355 REMARK 465 VAL A 356 REMARK 465 GLU A 357 REMARK 465 VAL A 358 REMARK 465 LEU A 359 REMARK 465 ILE A 360 REMARK 465 GLU A 361 REMARK 465 THR A 362 REMARK 465 GLY A 363 REMARK 465 ILE A 364 REMARK 465 SER A 365 REMARK 465 PRO A 366 REMARK 465 SER A 367 REMARK 465 LYS A 368 REMARK 465 ARG A 369 REMARK 465 GLN A 370 REMARK 465 ALA A 371 REMARK 465 ARG A 372 REMARK 465 GLU A 373 REMARK 465 ASP A 374 REMARK 465 VAL A 375 REMARK 465 ASN A 376 REMARK 465 ASN A 377 REMARK 465 GLY A 378 REMARK 465 ALA A 379 REMARK 465 ILE A 380 REMARK 465 TYR A 381 REMARK 465 ILE A 382 REMARK 465 ASN A 383 REMARK 465 GLY A 384 REMARK 465 GLU A 385 REMARK 465 ARG A 386 REMARK 465 GLN A 387 REMARK 465 GLN A 388 REMARK 465 ASP A 389 REMARK 465 VAL A 390 REMARK 465 ASN A 391 REMARK 465 TYR A 392 REMARK 465 ALA A 393 REMARK 465 LEU A 394 REMARK 465 ALA A 395 REMARK 465 PRO A 396 REMARK 465 GLU A 397 REMARK 465 ASP A 398 REMARK 465 LYS A 399 REMARK 465 ILE A 400 REMARK 465 ASP A 401 REMARK 465 GLY A 402 REMARK 465 GLU A 403 REMARK 465 PHE A 404 REMARK 465 THR A 405 REMARK 465 ILE A 406 REMARK 465 ILE A 407 REMARK 465 ARG A 408 REMARK 465 ARG A 409 REMARK 465 GLY A 410 REMARK 465 LYS A 411 REMARK 465 LYS A 412 REMARK 465 LYS A 413 REMARK 465 TYR A 414 REMARK 465 PHE A 415 REMARK 465 MET A 416 REMARK 465 VAL A 417 REMARK 465 ASN A 418 REMARK 465 TYR A 419 REMARK 465 GLN A 420 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 3 33.67 169.03 REMARK 500 GLN A 17 146.70 -175.27 REMARK 500 ASP A 26 -70.98 -54.86 REMARK 500 LYS A 30 -58.57 -148.80 REMARK 500 ILE A 48 -16.06 -48.19 REMARK 500 LEU A 52 -74.86 -49.69 REMARK 500 PRO A 81 -1.40 -59.30 REMARK 500 LYS A 84 146.36 -36.19 REMARK 500 ARG A 88 -162.58 -75.53 REMARK 500 HIS A 108 -19.91 -41.00 REMARK 500 HIS A 117 52.25 -143.59 REMARK 500 GLN A 130 -83.94 -89.94 REMARK 500 ILE A 131 120.38 -17.07 REMARK 500 SER A 135 -76.39 -52.13 REMARK 500 ARG A 138 -73.62 -60.67 REMARK 500 HIS A 143 58.97 -107.43 REMARK 500 VAL A 144 75.21 -151.12 REMARK 500 LEU A 150 5.65 -67.44 REMARK 500 ASN A 186 3.98 90.73 REMARK 500 ASP A 195 -0.66 -57.22 REMARK 500 TYR A 211 104.36 178.81 REMARK 500 GLN A 213 94.29 1.02 REMARK 500 THR A 214 43.79 -58.64 REMARK 500 ASP A 215 50.54 73.80 REMARK 500 PRO A 222 -160.87 -79.39 REMARK 500 LYS A 231 91.93 1.61 REMARK 500 SER A 237 81.18 -67.97 REMARK 500 ALA A 239 -158.69 -90.84 REMARK 500 LEU A 242 10.95 -66.74 REMARK 500 GLU A 245 45.17 -91.39 REMARK 500 LYS A 246 -33.55 -158.75 REMARK 500 GLU A 262 -74.36 -60.90 REMARK 500 ASP A 263 43.49 -69.85 REMARK 500 GLU A 288 -6.78 -145.39 REMARK 500 PRO A 290 -15.53 -42.52 REMARK 500 ALA A 295 -73.88 -53.25 REMARK 500 ALA A 300 -74.73 -40.33 REMARK 500 ASN A 314 -70.20 -53.97 REMARK 500 ARG A 318 14.54 -64.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR A 250 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 629 A 421 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1JII RELATED DB: PDB REMARK 900 SAME PROTEIN, DIFFERENT INHIBITOR REMARK 900 RELATED ID: 1JIK RELATED DB: PDB REMARK 900 SAME PROTEIN, DIFFERENT INHIBITOR REMARK 900 RELATED ID: 1JIL RELATED DB: PDB REMARK 900 SAME PROTEIN, DIFFERENT INHIBITOR DBREF 1JIJ A 1 420 GB 13701524 BAB42818 1 420 SEQRES 1 A 420 MET THR ASN VAL LEU ILE GLU ASP LEU LYS TRP ARG GLY SEQRES 2 A 420 LEU ILE TYR GLN GLN THR ASP GLU GLN GLY ILE GLU ASP SEQRES 3 A 420 LEU LEU ASN LYS GLU GLN VAL THR LEU TYR CYS GLY ALA SEQRES 4 A 420 ASP PRO THR ALA ASP SER LEU HIS ILE GLY HIS LEU LEU SEQRES 5 A 420 PRO PHE LEU THR LEU ARG ARG PHE GLN GLU HIS GLY HIS SEQRES 6 A 420 ARG PRO ILE VAL LEU ILE GLY GLY GLY THR GLY MET ILE SEQRES 7 A 420 GLY ASP PRO SER GLY LYS SER GLU GLU ARG VAL LEU GLN SEQRES 8 A 420 THR GLU GLU GLN VAL ASP LYS ASN ILE GLU GLY ILE SER SEQRES 9 A 420 LYS GLN MET HIS ASN ILE PHE GLU PHE GLY THR ASP HIS SEQRES 10 A 420 GLY ALA VAL LEU VAL ASN ASN ARG ASP TRP LEU GLY GLN SEQRES 11 A 420 ILE SER LEU ILE SER PHE LEU ARG ASP TYR GLY LYS HIS SEQRES 12 A 420 VAL GLY VAL ASN TYR MET LEU GLY LYS ASP SER ILE GLN SEQRES 13 A 420 SER ARG LEU GLU HIS GLY ILE SER TYR THR GLU PHE THR SEQRES 14 A 420 TYR THR ILE LEU GLN ALA ILE ASP PHE GLY HIS LEU ASN SEQRES 15 A 420 ARG GLU LEU ASN CYS LYS ILE GLN VAL GLY GLY SER ASP SEQRES 16 A 420 GLN TRP GLY ASN ILE THR SER GLY ILE GLU LEU MET ARG SEQRES 17 A 420 ARG MET TYR GLY GLN THR ASP ALA TYR GLY LEU THR ILE SEQRES 18 A 420 PRO LEU VAL THR LYS SER ASP GLY LYS LYS PHE GLY LYS SEQRES 19 A 420 SER GLU SER GLY ALA VAL TRP LEU ASP ALA GLU LYS THR SEQRES 20 A 420 SER PRO TYR GLU PHE TYR GLN PHE TRP ILE ASN GLN SER SEQRES 21 A 420 ASP GLU ASP VAL ILE LYS PHE LEU LYS TYR PHE THR PHE SEQRES 22 A 420 LEU GLY LYS GLU GLU ILE ASP ARG LEU GLU GLN SER LYS SEQRES 23 A 420 ASN GLU ALA PRO HIS LEU ARG GLU ALA GLN LYS THR LEU SEQRES 24 A 420 ALA GLU GLU VAL THR LYS PHE ILE HIS GLY GLU ASP ALA SEQRES 25 A 420 LEU ASN ASP ALA ILE ARG ILE SER GLN ALA LEU PHE SER SEQRES 26 A 420 GLY ASP LEU LYS SER LEU SER ALA LYS GLU LEU LYS ASP SEQRES 27 A 420 GLY PHE LYS ASP VAL PRO GLN VAL THR LEU SER ASN ASP SEQRES 28 A 420 THR THR ASN ILE VAL GLU VAL LEU ILE GLU THR GLY ILE SEQRES 29 A 420 SER PRO SER LYS ARG GLN ALA ARG GLU ASP VAL ASN ASN SEQRES 30 A 420 GLY ALA ILE TYR ILE ASN GLY GLU ARG GLN GLN ASP VAL SEQRES 31 A 420 ASN TYR ALA LEU ALA PRO GLU ASP LYS ILE ASP GLY GLU SEQRES 32 A 420 PHE THR ILE ILE ARG ARG GLY LYS LYS LYS TYR PHE MET SEQRES 33 A 420 VAL ASN TYR GLN HET 629 A 421 29 HETNAM 629 [2-AMINO-3-(4-HYDROXY-PHENYL)-PROPIONYLAMINO]-(1,3,4,5- HETNAM 2 629 TETRAHYDROXY-4-HYDROXYMETHYL-PIPERIDIN-2-YL)- ACETIC HETNAM 3 629 ACID HETSYN 629 SB-239629 FORMUL 2 629 C17 H25 N3 O9 HELIX 1 1 ASN A 3 LYS A 10 1 8 HELIX 2 2 ASP A 20 ASN A 29 1 10 HELIX 3 3 HIS A 50 HIS A 63 1 14 HELIX 4 4 THR A 92 PHE A 111 1 20 HELIX 5 5 ARG A 125 TRP A 127 5 3 HELIX 6 6 SER A 132 TYR A 140 1 9 HELIX 7 7 GLY A 141 VAL A 144 5 4 HELIX 8 8 GLY A 145 LEU A 150 1 6 HELIX 9 9 LYS A 152 HIS A 161 1 10 HELIX 10 10 SER A 164 THR A 169 1 6 HELIX 11 11 THR A 169 LEU A 185 1 17 HELIX 12 12 GLY A 193 ASP A 195 5 3 HELIX 13 13 GLN A 196 TYR A 211 1 16 HELIX 14 14 SER A 248 ASN A 258 1 11 HELIX 15 15 VAL A 264 THR A 272 1 9 HELIX 16 16 GLY A 275 ALA A 289 1 15 HELIX 17 17 ARG A 293 GLY A 309 1 17 HELIX 18 18 GLU A 310 ARG A 318 1 9 SHEET 1 A 3 GLN A 17 GLN A 18 0 SHEET 2 A 3 TYR A 217 THR A 220 -1 N THR A 220 O GLN A 17 SHEET 3 A 3 ILE A 189 GLY A 192 1 O GLN A 190 N LEU A 219 SHEET 1 B 3 THR A 34 ALA A 39 0 SHEET 2 B 3 ARG A 66 ILE A 71 1 O ARG A 66 N LEU A 35 SHEET 3 B 3 VAL A 120 ASN A 123 1 O VAL A 120 N VAL A 69 SITE 1 AC1 15 TYR A 36 GLY A 38 ALA A 39 ASP A 40 SITE 2 AC1 15 GLY A 49 HIS A 50 LEU A 70 ASP A 80 SITE 3 AC1 15 TYR A 170 GLN A 174 ASP A 177 GLY A 193 SITE 4 AC1 15 ASP A 195 GLN A 196 ASN A 199 CRYST1 70.090 98.930 143.140 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014270 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010110 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006990 0.00000 MASTER 427 0 1 18 6 0 4 6 0 0 0 33 END