HEADER CONTRACTILE PROTEIN 03-DEC-02 1J1D TITLE CRYSTAL STRUCTURE OF THE 46KDA DOMAIN OF HUMAN CARDIAC TITLE 2 TROPONIN IN THE CA2+ SATURATED FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: TROPONIN C; COMPND 3 CHAIN: A, D; COMPND 4 SYNONYM: TNC; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: TROPONIN T; COMPND 9 CHAIN: B, E; COMPND 10 FRAGMENT: CNBR FRAGMENT, RESIDUES 183-288; COMPND 11 SYNONYM: TNT; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: TROPONIN I; COMPND 15 CHAIN: C, F; COMPND 16 FRAGMENT: RESIDUES 31-163; COMPND 17 SYNONYM: TNI; COMPND 18 ENGINEERED: YES; COMPND 19 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 TISSUE: CARDIAC MUSCLE; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET3D; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 TISSUE: CARDIAC MUSCLE; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PET3D; SOURCE 21 MOL_ID: 3; SOURCE 22 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 23 ORGANISM_COMMON: HUMAN; SOURCE 24 ORGANISM_TAXID: 9606; SOURCE 25 TISSUE: CARDIAC MUSCLE; SOURCE 26 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 27 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 28 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 29 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 30 EXPRESSION_SYSTEM_PLASMID: PET3D KEYWDS THIN FILAMENT, MUSCLE REGULATION, CA2+ BINDING PROTEIN, EF- KEYWDS 2 HAND, COILED-COIL, CONTRACTILE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.TAKEDA,A.YAMASHITA,K.MAEDA,Y.MAEDA REVDAT 2 24-FEB-09 1J1D 1 VERSN REVDAT 1 15-JUL-03 1J1D 0 JRNL AUTH S.TAKEDA,A.YAMASHITA,K.MAEDA,Y.MAEDA JRNL TITL STRUCTURE OF THE CORE DOMAIN OF HUMAN CARDIAC JRNL TITL 2 TROPONIN IN THE CA2+-SATURATED FORM JRNL REF NATURE V. 424 35 2003 JRNL REFN ISSN 0028-0836 JRNL PMID 12840750 JRNL DOI 10.1038/NATURE01780 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH S.TAKEDA,T.KOBAYASHI,H.TANIGUCHI,H.HAYASHI,Y.MAEDA REMARK 1 TITL STRUCTURAL AND FUNCTIONAL DOMAINS OF THE TROPONIN REMARK 1 TITL 2 COMPLEX REVEALED BY LIMITED DIGESTION REMARK 1 REF EUR.J.BIOCHEM. V. 246 611 1997 REMARK 1 REFN ISSN 0014-2956 REMARK 1 REFERENCE 2 REMARK 1 AUTH D.G.VASSYLYEV,S.TAKEDA,S.WAKATSUKI,K.MAEDA,Y.MAEDA REMARK 1 TITL CRYSTAL STRUCTURE OF TROPONIN C IN COMPLEX WITH REMARK 1 TITL 2 TROPONIN I FRAGMENT AT 2.3-A RESOLUTION REMARK 1 REF PROC.NATL.ACAD.SCI.USA V. 95 4847 1998 REMARK 1 REFN ISSN 0027-8424 REMARK 1 DOI 10.1073/PNAS.95.9.4847 REMARK 2 REMARK 2 RESOLUTION. 2.61 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.61 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 96.3 REMARK 3 NUMBER OF REFLECTIONS : 27881 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.264 REMARK 3 FREE R VALUE : 0.298 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1362 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.61 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.70 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 81.30 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2234 REMARK 3 BIN R VALUE (WORKING SET) : 0.4100 REMARK 3 BIN FREE R VALUE : 0.3600 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.30 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 100 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5669 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 102 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 76.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 73.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -18.58400 REMARK 3 B22 (A**2) : 1.60500 REMARK 3 B33 (A**2) : 16.97900 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.52200 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.45 REMARK 3 ESD FROM SIGMAA (A) : 0.51 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.50 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.55 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.40 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 18.75 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.75 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.352 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.358 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.894 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.125 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.33 REMARK 3 BSOL : 51.10 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : ION.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : ION.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1J1D COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-DEC-02. REMARK 100 THE RCSB ID CODE IS RCSB005507. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-DEC-01 REMARK 200 TEMPERATURE (KELVIN) : 90 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : KARKPATRIC-BOETZE TYPE RH- REMARK 200 COATED DOUBLE MIRROR (SUPER REMARK 200 MIRRORS) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27912 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 200 DATA REDUNDANCY : 3.720 REMARK 200 R MERGE (I) : 0.04200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.22300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG3350, LITHIUM CHLORIDE, TRIS- REMARK 280 HCL, CALCIUM CHLORIDE, GLYCEROL, PH 8.0, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 83.93000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: CHAIN A, B AND C, AND CHAIN D, E AND F ARE BIOLOGICAL REMARK 300 HETEROTRIMER ASSEMBLIES, RESPECTIVELY. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9730 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20620 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -88.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8820 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -69.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 90 REMARK 465 GLY A 91 REMARK 465 HIS B 183 REMARK 465 PHE B 184 REMARK 465 GLY B 185 REMARK 465 GLY B 186 REMARK 465 TYR B 187 REMARK 465 ILE B 188 REMARK 465 GLN B 189 REMARK 465 LYS B 190 REMARK 465 GLN B 191 REMARK 465 ALA B 192 REMARK 465 GLN B 193 REMARK 465 THR B 194 REMARK 465 GLU B 195 REMARK 465 ARG B 196 REMARK 465 LYS B 197 REMARK 465 SER B 198 REMARK 465 GLY B 199 REMARK 465 LYS B 200 REMARK 465 ARG B 201 REMARK 465 GLN B 272 REMARK 465 LYS B 273 REMARK 465 VAL B 274 REMARK 465 SER B 275 REMARK 465 LYS B 276 REMARK 465 THR B 277 REMARK 465 ARG B 278 REMARK 465 GLY B 279 REMARK 465 LYS B 280 REMARK 465 ALA B 281 REMARK 465 LYS B 282 REMARK 465 VAL B 283 REMARK 465 THR B 284 REMARK 465 GLY B 285 REMARK 465 ARG B 286 REMARK 465 TRP B 287 REMARK 465 LYS B 288 REMARK 465 MET C 31 REMARK 465 GLU C 32 REMARK 465 PRO C 33 REMARK 465 HIS C 34 REMARK 465 GLY C 137 REMARK 465 LYS C 138 REMARK 465 PHE C 139 REMARK 465 LYS C 140 REMARK 465 ARG C 141 REMARK 465 PRO C 142 REMARK 465 THR C 143 REMARK 465 LEU C 144 REMARK 465 ALA C 161 REMARK 465 ARG C 162 REMARK 465 ALA C 163 REMARK 465 MET D 1 REMARK 465 HIS E 183 REMARK 465 PHE E 184 REMARK 465 GLY E 185 REMARK 465 GLY E 186 REMARK 465 TYR E 187 REMARK 465 ILE E 188 REMARK 465 GLN E 189 REMARK 465 LYS E 190 REMARK 465 GLN E 191 REMARK 465 ALA E 192 REMARK 465 GLN E 193 REMARK 465 THR E 194 REMARK 465 GLU E 195 REMARK 465 ARG E 196 REMARK 465 LYS E 197 REMARK 465 SER E 198 REMARK 465 GLY E 199 REMARK 465 SER E 275 REMARK 465 LYS E 276 REMARK 465 THR E 277 REMARK 465 ARG E 278 REMARK 465 GLY E 279 REMARK 465 LYS E 280 REMARK 465 ALA E 281 REMARK 465 LYS E 282 REMARK 465 VAL E 283 REMARK 465 THR E 284 REMARK 465 GLY E 285 REMARK 465 ARG E 286 REMARK 465 TRP E 287 REMARK 465 LYS E 288 REMARK 465 MET F 31 REMARK 465 GLU F 32 REMARK 465 PRO F 33 REMARK 465 HIS F 34 REMARK 465 ALA F 35 REMARK 465 LYS F 36 REMARK 465 PHE F 139 REMARK 465 LYS F 140 REMARK 465 ARG F 141 REMARK 465 PRO F 142 REMARK 465 THR F 143 REMARK 465 LEU F 144 REMARK 465 ARG F 145 REMARK 465 ARG F 146 REMARK 465 VAL F 147 REMARK 465 ARG F 148 REMARK 465 ALA F 163 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ILE E 268 NE2 GLN E 272 2.11 REMARK 500 OD1 ASP A 105 OD2 ASP A 109 2.13 REMARK 500 O GLY C 160 O HOH C 176 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 115 -70.57 -63.55 REMARK 500 ASP A 141 80.15 -63.38 REMARK 500 ASP A 145 45.59 -78.71 REMARK 500 ARG B 267 -38.17 -39.68 REMARK 500 ASN B 269 -70.20 -64.81 REMARK 500 ASP B 270 40.94 -60.95 REMARK 500 LYS C 38 -21.42 -156.88 REMARK 500 LYS C 40 -60.05 -24.15 REMARK 500 LEU C 135 -76.60 -78.56 REMARK 500 PRO D 52 -179.33 -65.46 REMARK 500 MET D 85 -80.80 -117.83 REMARK 500 LYS D 86 -76.79 -43.93 REMARK 500 SER D 89 138.05 -37.64 REMARK 500 LYS D 90 57.99 -141.16 REMARK 500 ASP D 141 48.62 -73.14 REMARK 500 ASN D 144 65.22 67.25 REMARK 500 ARG E 201 143.00 -170.90 REMARK 500 SER F 39 94.14 -174.82 REMARK 500 SER F 42 109.94 -45.19 REMARK 500 ALA F 80 56.02 -141.80 REMARK 500 PRO F 82 147.24 -31.74 REMARK 500 LEU F 88 137.14 179.27 REMARK 500 PHE F 90 -40.94 -28.76 REMARK 500 LEU F 135 -70.68 -64.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 202 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 107 OD1 REMARK 620 2 ASP A 109 OD2 69.0 REMARK 620 3 GLU A 116 OE1 119.4 170.0 REMARK 620 4 GLU A 116 OE2 71.0 130.3 53.9 REMARK 620 5 ASP A 105 OD1 70.4 58.7 117.5 80.8 REMARK 620 6 ASP A 109 OD1 83.8 47.8 134.8 149.8 106.5 REMARK 620 7 TYR A 111 O 151.2 82.1 89.2 132.4 94.4 77.1 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 203 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 143 OD1 REMARK 620 2 ARG A 147 O 138.8 REMARK 620 3 ASP A 141 OD1 83.7 60.4 REMARK 620 4 ASN A 143 ND2 51.2 154.7 134.8 REMARK 620 5 ASP A 145 OD1 63.0 102.8 101.8 57.9 REMARK 620 6 GLU A 152 OE1 88.8 120.2 109.1 77.5 135.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA D 201 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER D 69 OG REMARK 620 2 ASP D 65 OD2 113.6 REMARK 620 3 GLU D 76 OE1 139.9 61.9 REMARK 620 4 ASP D 67 OD1 66.8 100.8 74.9 REMARK 620 5 ASP D 67 OD2 80.3 57.9 63.5 43.7 REMARK 620 6 THR D 71 O 99.0 96.1 120.8 161.3 149.7 REMARK 620 7 GLU D 76 OE2 164.1 80.5 52.3 119.5 114.5 71.2 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA D 202 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN D 107 OD1 REMARK 620 2 ASP D 109 OD1 64.5 REMARK 620 3 GLU D 116 OE1 60.0 114.7 REMARK 620 4 ASP D 105 OD2 72.7 57.6 74.9 REMARK 620 5 GLU D 116 OE2 109.1 145.7 49.1 88.1 REMARK 620 6 ASP D 109 OD2 89.7 44.9 149.6 99.7 161.1 REMARK 620 7 TYR D 111 O 142.2 80.1 132.4 77.5 92.4 72.8 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA D 203 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP D 145 OD2 REMARK 620 2 GLU D 152 OE1 158.9 REMARK 620 3 ASP D 141 OD2 59.9 110.3 REMARK 620 4 ASP D 145 OD1 60.3 122.9 119.6 REMARK 620 5 ARG D 147 O 60.5 138.4 75.8 82.1 REMARK 620 6 ASN D 143 OD1 81.8 77.2 71.2 93.5 139.0 REMARK 620 7 GLU D 152 OE2 140.6 56.6 102.3 129.3 81.8 128.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 201 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 71 O REMARK 620 2 ASP A 73 OD2 117.6 REMARK 620 3 GLU A 76 OE1 124.7 61.1 REMARK 620 4 GLU A 76 OE2 71.4 70.7 55.8 REMARK 620 5 SER A 69 OG 77.1 132.9 149.0 147.7 REMARK 620 6 ASP A 67 OD1 145.3 80.5 89.7 142.6 69.6 REMARK 620 7 ASP A 65 OD2 77.6 152.0 90.9 94.8 71.2 100.1 REMARK 620 8 ASP A 67 OD2 126.5 115.3 88.0 136.4 61.2 41.2 58.9 REMARK 620 N 1 2 3 4 5 6 7 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 201 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 202 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 203 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA D 201 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA D 202 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA D 203 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1J1E RELATED DB: PDB REMARK 900 52KD DOMAIN OF THE SAME PROTEIN AT 3.3 ANGSTROM DBREF 1J1D A 1 161 UNP P63316 TNNC1_HUMAN 1 161 DBREF 1J1D B 183 288 UNP P45379 TNNT2_HUMAN 183 288 DBREF 1J1D C 31 163 UNP P19429 TNNI3_HUMAN 30 162 DBREF 1J1D D 1 161 UNP P63316 TNNC1_HUMAN 1 161 DBREF 1J1D E 183 288 UNP P45379 TNNT2_HUMAN 183 288 DBREF 1J1D F 31 163 UNP P19429 TNNI3_HUMAN 30 162 SEQADV 1J1D SER A 35 UNP P63316 CYS 35 ENGINEERED SEQADV 1J1D SER A 84 UNP P63316 CYS 84 ENGINEERED SEQADV 1J1D MET C 31 UNP P19429 THR 30 ENGINEERED SEQADV 1J1D ALA C 80 UNP P19429 CYS 79 ENGINEERED SEQADV 1J1D ALA C 97 UNP P19429 CYS 96 ENGINEERED SEQADV 1J1D SER D 35 UNP P63316 CYS 35 ENGINEERED SEQADV 1J1D SER D 84 UNP P63316 CYS 84 ENGINEERED SEQADV 1J1D MET F 31 UNP P19429 THR 30 ENGINEERED SEQADV 1J1D ALA F 80 UNP P19429 CYS 79 ENGINEERED SEQADV 1J1D ALA F 97 UNP P19429 CYS 96 ENGINEERED SEQRES 1 A 161 MET ASP ASP ILE TYR LYS ALA ALA VAL GLU GLN LEU THR SEQRES 2 A 161 GLU GLU GLN LYS ASN GLU PHE LYS ALA ALA PHE ASP ILE SEQRES 3 A 161 PHE VAL LEU GLY ALA GLU ASP GLY SER ILE SER THR LYS SEQRES 4 A 161 GLU LEU GLY LYS VAL MET ARG MET LEU GLY GLN ASN PRO SEQRES 5 A 161 THR PRO GLU GLU LEU GLN GLU MET ILE ASP GLU VAL ASP SEQRES 6 A 161 GLU ASP GLY SER GLY THR VAL ASP PHE ASP GLU PHE LEU SEQRES 7 A 161 VAL MET MET VAL ARG SER MET LYS ASP ASP SER LYS GLY SEQRES 8 A 161 LYS SER GLU GLU GLU LEU SER ASP LEU PHE ARG MET PHE SEQRES 9 A 161 ASP LYS ASN ALA ASP GLY TYR ILE ASP LEU GLU GLU LEU SEQRES 10 A 161 LYS ILE MET LEU GLN ALA THR GLY GLU THR ILE THR GLU SEQRES 11 A 161 ASP ASP ILE GLU GLU LEU MET LYS ASP GLY ASP LYS ASN SEQRES 12 A 161 ASN ASP GLY ARG ILE ASP TYR ASP GLU PHE LEU GLU PHE SEQRES 13 A 161 MET LYS GLY VAL GLU SEQRES 1 B 106 HIS PHE GLY GLY TYR ILE GLN LYS GLN ALA GLN THR GLU SEQRES 2 B 106 ARG LYS SER GLY LYS ARG GLN THR GLU ARG GLU LYS LYS SEQRES 3 B 106 LYS LYS ILE LEU ALA GLU ARG ARG LYS VAL LEU ALA ILE SEQRES 4 B 106 ASP HIS LEU ASN GLU ASP GLN LEU ARG GLU LYS ALA LYS SEQRES 5 B 106 GLU LEU TRP GLN THR ILE TYR ASN LEU GLU ALA GLU LYS SEQRES 6 B 106 PHE ASP LEU GLN GLU LYS PHE LYS GLN GLN LYS TYR GLU SEQRES 7 B 106 ILE ASN VAL LEU ARG ASN ARG ILE ASN ASP ASN GLN LYS SEQRES 8 B 106 VAL SER LYS THR ARG GLY LYS ALA LYS VAL THR GLY ARG SEQRES 9 B 106 TRP LYS SEQRES 1 C 133 MET GLU PRO HIS ALA LYS LYS LYS SER LYS ILE SER ALA SEQRES 2 C 133 SER ARG LYS LEU GLN LEU LYS THR LEU LEU LEU GLN ILE SEQRES 3 C 133 ALA LYS GLN GLU LEU GLU ARG GLU ALA GLU GLU ARG ARG SEQRES 4 C 133 GLY GLU LYS GLY ARG ALA LEU SER THR ARG ALA GLN PRO SEQRES 5 C 133 LEU GLU LEU ALA GLY LEU GLY PHE ALA GLU LEU GLN ASP SEQRES 6 C 133 LEU ALA ARG GLN LEU HIS ALA ARG VAL ASP LYS VAL ASP SEQRES 7 C 133 GLU GLU ARG TYR ASP ILE GLU ALA LYS VAL THR LYS ASN SEQRES 8 C 133 ILE THR GLU ILE ALA ASP LEU THR GLN LYS ILE PHE ASP SEQRES 9 C 133 LEU ARG GLY LYS PHE LYS ARG PRO THR LEU ARG ARG VAL SEQRES 10 C 133 ARG ILE SER ALA ASP ALA MET MET GLN ALA LEU LEU GLY SEQRES 11 C 133 ALA ARG ALA SEQRES 1 D 161 MET ASP ASP ILE TYR LYS ALA ALA VAL GLU GLN LEU THR SEQRES 2 D 161 GLU GLU GLN LYS ASN GLU PHE LYS ALA ALA PHE ASP ILE SEQRES 3 D 161 PHE VAL LEU GLY ALA GLU ASP GLY SER ILE SER THR LYS SEQRES 4 D 161 GLU LEU GLY LYS VAL MET ARG MET LEU GLY GLN ASN PRO SEQRES 5 D 161 THR PRO GLU GLU LEU GLN GLU MET ILE ASP GLU VAL ASP SEQRES 6 D 161 GLU ASP GLY SER GLY THR VAL ASP PHE ASP GLU PHE LEU SEQRES 7 D 161 VAL MET MET VAL ARG SER MET LYS ASP ASP SER LYS GLY SEQRES 8 D 161 LYS SER GLU GLU GLU LEU SER ASP LEU PHE ARG MET PHE SEQRES 9 D 161 ASP LYS ASN ALA ASP GLY TYR ILE ASP LEU GLU GLU LEU SEQRES 10 D 161 LYS ILE MET LEU GLN ALA THR GLY GLU THR ILE THR GLU SEQRES 11 D 161 ASP ASP ILE GLU GLU LEU MET LYS ASP GLY ASP LYS ASN SEQRES 12 D 161 ASN ASP GLY ARG ILE ASP TYR ASP GLU PHE LEU GLU PHE SEQRES 13 D 161 MET LYS GLY VAL GLU SEQRES 1 E 106 HIS PHE GLY GLY TYR ILE GLN LYS GLN ALA GLN THR GLU SEQRES 2 E 106 ARG LYS SER GLY LYS ARG GLN THR GLU ARG GLU LYS LYS SEQRES 3 E 106 LYS LYS ILE LEU ALA GLU ARG ARG LYS VAL LEU ALA ILE SEQRES 4 E 106 ASP HIS LEU ASN GLU ASP GLN LEU ARG GLU LYS ALA LYS SEQRES 5 E 106 GLU LEU TRP GLN THR ILE TYR ASN LEU GLU ALA GLU LYS SEQRES 6 E 106 PHE ASP LEU GLN GLU LYS PHE LYS GLN GLN LYS TYR GLU SEQRES 7 E 106 ILE ASN VAL LEU ARG ASN ARG ILE ASN ASP ASN GLN LYS SEQRES 8 E 106 VAL SER LYS THR ARG GLY LYS ALA LYS VAL THR GLY ARG SEQRES 9 E 106 TRP LYS SEQRES 1 F 133 MET GLU PRO HIS ALA LYS LYS LYS SER LYS ILE SER ALA SEQRES 2 F 133 SER ARG LYS LEU GLN LEU LYS THR LEU LEU LEU GLN ILE SEQRES 3 F 133 ALA LYS GLN GLU LEU GLU ARG GLU ALA GLU GLU ARG ARG SEQRES 4 F 133 GLY GLU LYS GLY ARG ALA LEU SER THR ARG ALA GLN PRO SEQRES 5 F 133 LEU GLU LEU ALA GLY LEU GLY PHE ALA GLU LEU GLN ASP SEQRES 6 F 133 LEU ALA ARG GLN LEU HIS ALA ARG VAL ASP LYS VAL ASP SEQRES 7 F 133 GLU GLU ARG TYR ASP ILE GLU ALA LYS VAL THR LYS ASN SEQRES 8 F 133 ILE THR GLU ILE ALA ASP LEU THR GLN LYS ILE PHE ASP SEQRES 9 F 133 LEU ARG GLY LYS PHE LYS ARG PRO THR LEU ARG ARG VAL SEQRES 10 F 133 ARG ILE SER ALA ASP ALA MET MET GLN ALA LEU LEU GLY SEQRES 11 F 133 ALA ARG ALA HET CA A 201 1 HET CA A 202 1 HET CA A 203 1 HET CA D 201 1 HET CA D 202 1 HET CA D 203 1 HETNAM CA CALCIUM ION FORMUL 7 CA 6(CA 2+) FORMUL 13 HOH *102(H2 O) HELIX 1 1 TYR A 5 GLN A 11 1 7 HELIX 2 2 THR A 13 VAL A 28 1 16 HELIX 3 3 SER A 37 LEU A 48 1 12 HELIX 4 4 THR A 53 GLU A 63 1 11 HELIX 5 5 ASP A 73 SER A 84 1 12 HELIX 6 6 SER A 93 ASP A 105 1 13 HELIX 7 7 LEU A 114 THR A 124 1 11 HELIX 8 8 THR A 129 ASP A 141 1 13 HELIX 9 9 ASP A 149 LYS A 158 1 10 HELIX 10 10 THR B 203 ASP B 222 1 20 HELIX 11 11 ASN B 225 ASP B 270 1 46 HELIX 12 12 SER C 42 ALA C 80 1 39 HELIX 13 13 GLY C 89 ARG C 136 1 48 HELIX 14 14 SER C 150 LEU C 159 1 10 HELIX 15 15 ASP D 3 GLN D 11 1 9 HELIX 16 16 THR D 13 VAL D 28 1 16 HELIX 17 17 SER D 37 GLN D 50 1 14 HELIX 18 18 THR D 53 ASP D 65 1 13 HELIX 19 19 ASP D 73 MET D 85 1 13 HELIX 20 20 SER D 93 ASP D 105 1 13 HELIX 21 21 LEU D 114 ALA D 123 1 10 HELIX 22 22 THR D 129 ASP D 141 1 13 HELIX 23 23 TYR D 150 MET D 157 1 8 HELIX 24 24 ARG E 201 ASP E 222 1 22 HELIX 25 25 ASN E 225 ASN E 271 1 47 HELIX 26 26 SER F 42 ALA F 80 1 39 HELIX 27 27 GLY F 89 GLY F 137 1 49 HELIX 28 28 SER F 150 LEU F 159 1 10 HELIX 29 29 GLY F 160 ARG F 162 5 3 SHEET 1 A 2 ILE A 112 ASP A 113 0 SHEET 2 A 2 ARG A 147 ILE A 148 -1 O ILE A 148 N ILE A 112 SHEET 1 B 2 TYR D 111 ASP D 113 0 SHEET 2 B 2 ARG D 147 ASP D 149 -1 O ILE D 148 N ILE D 112 LINK CA CA A 202 OD1 ASN A 107 1555 1555 2.07 LINK CA CA A 202 OD2 ASP A 109 1555 1555 2.14 LINK CA CA A 202 OE1 GLU A 116 1555 1555 1.99 LINK CA CA A 203 OD1 ASN A 143 1555 1555 2.07 LINK CA CA A 203 O ARG A 147 1555 1555 1.86 LINK CA CA D 201 OG SER D 69 1555 1555 2.17 LINK CA CA D 202 OD1 ASN D 107 1555 1555 2.07 LINK CA CA D 202 OD1 ASP D 109 1555 1555 2.08 LINK CA CA D 203 OD2 ASP D 145 1555 1555 2.04 LINK CA CA D 203 OE1 GLU D 152 1555 1555 2.18 LINK CA CA A 201 O THR A 71 1555 1555 2.63 LINK CA CA A 201 OD2 ASP A 73 1555 1555 3.29 LINK CA CA A 201 OE1 GLU A 76 1555 1555 2.37 LINK CA CA A 201 OE2 GLU A 76 1555 1555 2.27 LINK CA CA A 201 OG SER A 69 1555 1555 2.45 LINK CA CA A 201 OD1 ASP A 67 1555 1555 3.33 LINK CA CA A 201 OD2 ASP A 65 1555 1555 2.46 LINK CA CA A 201 OD2 ASP A 67 1555 1555 2.53 LINK CA CA A 202 OE2 GLU A 116 1555 1555 2.63 LINK CA CA A 202 OD1 ASP A 105 1555 1555 2.20 LINK CA CA A 202 OD1 ASP A 109 1555 1555 2.93 LINK CA CA A 202 O TYR A 111 1555 1555 2.49 LINK CA CA A 203 OD1 ASP A 141 1555 1555 2.76 LINK CA CA A 203 ND2 ASN A 143 1555 1555 2.85 LINK CA CA A 203 OD1 ASP A 145 1555 1555 2.45 LINK CA CA A 203 OE1 GLU A 152 1555 1555 2.30 LINK CA CA D 201 OD2 ASP D 65 1555 1555 2.60 LINK CA CA D 201 OE1 GLU D 76 1555 1555 2.55 LINK CA CA D 201 OD1 ASP D 67 1555 1555 3.16 LINK CA CA D 201 OD2 ASP D 67 1555 1555 2.46 LINK CA CA D 201 O THR D 71 1555 1555 2.33 LINK CA CA D 201 OE2 GLU D 76 1555 1555 2.41 LINK CA CA D 202 OE1 GLU D 116 1555 1555 2.79 LINK CA CA D 202 OD2 ASP D 105 1555 1555 2.63 LINK CA CA D 202 OE2 GLU D 116 1555 1555 2.39 LINK CA CA D 202 OD2 ASP D 109 1555 1555 3.09 LINK CA CA D 202 O TYR D 111 1555 1555 2.28 LINK CA CA D 203 OD2 ASP D 141 1555 1555 2.74 LINK CA CA D 203 OD1 ASP D 145 1555 1555 2.29 LINK CA CA D 203 O ARG D 147 1555 1555 2.49 LINK CA CA D 203 OD1 ASN D 143 1555 1555 2.43 LINK CA CA D 203 OE2 GLU D 152 1555 1555 2.44 SITE 1 AC1 6 ASP A 65 ASP A 67 SER A 69 THR A 71 SITE 2 AC1 6 ASP A 73 GLU A 76 SITE 1 AC2 5 ASP A 105 ASN A 107 ASP A 109 TYR A 111 SITE 2 AC2 5 GLU A 116 SITE 1 AC3 6 ASP A 141 ASN A 143 ASP A 145 ARG A 147 SITE 2 AC3 6 ILE A 148 GLU A 152 SITE 1 AC4 5 ASP D 65 ASP D 67 SER D 69 THR D 71 SITE 2 AC4 5 GLU D 76 SITE 1 AC5 6 ASP D 105 ASN D 107 ASP D 109 TYR D 111 SITE 2 AC5 6 ASP D 113 GLU D 116 SITE 1 AC6 5 ASP D 141 ASN D 143 ASP D 145 ARG D 147 SITE 2 AC6 5 GLU D 152 CRYST1 42.346 167.860 69.707 90.00 101.35 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023615 0.000000 0.004740 0.00000 SCALE2 0.000000 0.005957 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014632 0.00000 MASTER 504 0 6 29 4 0 12 6 0 0 0 66 END