HEADER HYDROLASE 20-DEC-00 1HQX TITLE R308K ARGINASE VARIANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: ARGINASE; COMPND 3 CHAIN: A, B, C; COMPND 4 EC: 3.5.3.1; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: NORWAY RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BINUCLEAR MANGANESE CLUSTER, MUTAGENESIS, ARGINASE, SUBUNIT-SUBUNIT KEYWDS 2 INTERACTIONS, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR L.T.LAVULO,T.M.SOSSONG JR.,M.R.BRIGHAM-BURKE,M.L.DOYLE,J.D.COX, AUTHOR 2 D.W.CHRISTIANSON,D.E.ASH REVDAT 5 23-OCT-19 1HQX 1 JRNL REVDAT 4 24-FEB-09 1HQX 1 VERSN REVDAT 3 01-APR-03 1HQX 1 JRNL REVDAT 2 31-DEC-02 1HQX 1 REMARK REVDAT 1 06-JUN-01 1HQX 0 JRNL AUTH L.T.LAVULO,T.M.SOSSONG JR.,M.R.BRIGHAM-BURKE,M.L.DOYLE, JRNL AUTH 2 J.D.COX,D.W.CHRISTIANSON,D.E.ASH JRNL TITL SUBUNIT-SUBUNIT INTERACTIONS IN TRIMERIC ARGINASE. JRNL TITL 2 GENERATION OF ACTIVE MONOMERS BY MUTATION OF A SINGLE AMINO JRNL TITL 3 ACID. JRNL REF J.BIOL.CHEM. V. 276 14242 2001 JRNL REFN ISSN 0021-9258 JRNL PMID 11278703 JRNL DOI 10.1074/JBC.M010575200 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 17624 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.263 REMARK 3 FREE R VALUE : 0.296 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 842 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7179 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 29 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1HQX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-DEC-00. REMARK 100 THE DEPOSITION ID IS D_1000012534. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-FEB-00 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X12B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.946445 REMARK 200 MONOCHROMATOR : FILTER REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18649 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.08900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 81.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.30900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.38 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8000, BICINE, MANGANESE CHLORIDE, REMARK 280 PH 8.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 74.73333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 37.36667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A TRIMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32580 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -62.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 SER A 3 REMARK 465 LYS A 4 REMARK 465 PRO A 5 REMARK 465 LYS A 320 REMARK 465 PRO A 321 REMARK 465 PRO A 322 REMARK 465 LYS A 323 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 SER B 3 REMARK 465 LYS B 4 REMARK 465 PRO B 5 REMARK 465 LYS B 320 REMARK 465 PRO B 321 REMARK 465 PRO B 322 REMARK 465 LYS B 323 REMARK 465 MET C 1 REMARK 465 SER C 2 REMARK 465 SER C 3 REMARK 465 LYS C 4 REMARK 465 PRO C 5 REMARK 465 LYS C 320 REMARK 465 PRO C 321 REMARK 465 PRO C 322 REMARK 465 LYS C 323 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER A 94 C VAL A 95 N 0.258 REMARK 500 GLY A 99 C ASP A 100 N -0.250 REMARK 500 HIS A 126 CA HIS A 126 CB -0.169 REMARK 500 SER B 94 C VAL B 95 N 0.257 REMARK 500 GLY B 99 C ASP B 100 N -0.251 REMARK 500 HIS B 126 CA HIS B 126 CB -0.170 REMARK 500 SER C 94 C VAL C 95 N 0.258 REMARK 500 GLY C 99 C ASP C 100 N -0.250 REMARK 500 HIS C 126 CA HIS C 126 CB -0.169 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 13 46.96 -141.80 REMARK 500 PRO A 14 73.01 -51.28 REMARK 500 SER A 16 10.97 -149.00 REMARK 500 ARG A 21 -148.24 -65.93 REMARK 500 ALA A 34 5.63 -66.05 REMARK 500 GLU A 44 36.58 -80.19 REMARK 500 VAL A 58 102.85 -49.86 REMARK 500 ASN A 60 62.42 70.17 REMARK 500 GLN A 65 -116.05 74.33 REMARK 500 VAL A 67 118.22 -39.78 REMARK 500 ASN A 90 30.96 -83.66 REMARK 500 HIS A 141 3.68 -64.33 REMARK 500 LYS A 155 12.08 -59.70 REMARK 500 PRO A 157 -179.46 -53.79 REMARK 500 PRO A 167 110.41 -32.07 REMARK 500 ALA A 171 -10.74 -45.39 REMARK 500 LEU A 179 131.54 -21.85 REMARK 500 ARG A 180 9.04 -162.74 REMARK 500 ASP A 181 72.53 -151.27 REMARK 500 ARG A 222 -84.30 -76.89 REMARK 500 THR A 241 55.09 -115.38 REMARK 500 ILE A 260 -70.85 -55.99 REMARK 500 GLU A 277 11.19 49.82 REMARK 500 THR A 292 -82.76 -48.64 REMARK 500 VAL A 293 -49.99 -28.17 REMARK 500 ALA B 13 46.96 -141.79 REMARK 500 PRO B 14 73.04 -51.33 REMARK 500 SER B 16 10.95 -149.03 REMARK 500 ARG B 21 -148.26 -65.92 REMARK 500 ALA B 34 5.61 -65.53 REMARK 500 GLU B 44 36.60 -80.21 REMARK 500 VAL B 58 102.85 -49.85 REMARK 500 ASN B 60 62.43 70.22 REMARK 500 GLN B 65 -116.04 74.35 REMARK 500 VAL B 67 118.20 -39.79 REMARK 500 ASN B 90 30.95 -83.65 REMARK 500 HIS B 141 3.65 -64.32 REMARK 500 LYS B 155 12.06 -59.71 REMARK 500 PRO B 157 -179.45 -53.79 REMARK 500 PRO B 167 110.39 -32.06 REMARK 500 ALA B 171 -10.76 -45.36 REMARK 500 LEU B 179 131.58 -21.88 REMARK 500 ARG B 180 9.07 -162.78 REMARK 500 ASP B 181 72.51 -151.29 REMARK 500 ARG B 222 -84.31 -76.88 REMARK 500 THR B 241 55.13 -115.36 REMARK 500 ILE B 260 -70.89 -55.96 REMARK 500 GLU B 277 11.20 49.84 REMARK 500 THR B 292 -82.76 -48.70 REMARK 500 VAL B 293 -49.96 -28.13 REMARK 500 REMARK 500 THIS ENTRY HAS 75 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 500 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 128 OD2 REMARK 620 2 ASP A 232 OD2 143.4 REMARK 620 3 HIS A 101 ND1 97.9 89.7 REMARK 620 4 ASP A 124 OD2 68.5 76.7 84.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 501 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 126 ND1 REMARK 620 2 ASP A 234 OD1 83.1 REMARK 620 3 ASP A 234 OD2 113.8 51.0 REMARK 620 4 ASP A 124 OD1 76.9 66.2 112.3 REMARK 620 5 ASP A 232 OD2 153.0 84.9 75.7 76.1 REMARK 620 6 HOH A 601 O 99.2 151.5 103.8 142.1 102.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 502 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 128 OD2 REMARK 620 2 ASP B 232 OD2 143.4 REMARK 620 3 HIS B 101 ND1 97.9 89.7 REMARK 620 4 ASP B 124 OD2 68.5 76.7 84.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 503 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 126 ND1 REMARK 620 2 ASP B 234 OD1 83.0 REMARK 620 3 ASP B 234 OD2 113.8 51.0 REMARK 620 4 ASP B 232 OD2 153.0 84.9 75.7 REMARK 620 5 HOH B 611 O 99.2 151.5 103.8 102.9 REMARK 620 6 ASP B 124 OD1 77.0 66.2 112.3 76.1 142.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN C 504 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 128 OD2 REMARK 620 2 ASP C 232 OD2 143.4 REMARK 620 3 ASP C 124 OD2 68.5 76.7 REMARK 620 4 HIS C 101 ND1 97.9 89.7 84.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN C 505 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 126 ND1 REMARK 620 2 ASP C 124 OD1 77.0 REMARK 620 3 ASP C 232 OD2 153.1 76.1 REMARK 620 4 ASP C 234 OD1 83.1 66.3 84.9 REMARK 620 5 ASP C 234 OD2 113.8 112.3 75.7 51.0 REMARK 620 6 HOH C 620 O 99.2 142.1 102.9 151.5 103.7 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN C 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN C 505 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1RLA RELATED DB: PDB REMARK 900 1RLA CONTAINS NATIVE ARGINASE. DBREF 1HQX A 1 323 UNP P07824 ARGI1_RAT 1 323 DBREF 1HQX B 1 323 UNP P07824 ARGI1_RAT 1 323 DBREF 1HQX C 1 323 UNP P07824 ARGI1_RAT 1 323 SEQADV 1HQX LYS A 308 UNP P07824 ARG 308 ENGINEERED SEQADV 1HQX LYS B 308 UNP P07824 ARG 308 ENGINEERED SEQADV 1HQX LYS C 308 UNP P07824 ARG 308 ENGINEERED SEQRES 1 A 323 MET SER SER LYS PRO LYS PRO ILE GLU ILE ILE GLY ALA SEQRES 2 A 323 PRO PHE SER LYS GLY GLN PRO ARG GLY GLY VAL GLU LYS SEQRES 3 A 323 GLY PRO ALA ALA LEU ARG LYS ALA GLY LEU VAL GLU LYS SEQRES 4 A 323 LEU LYS GLU THR GLU TYR ASN VAL ARG ASP HIS GLY ASP SEQRES 5 A 323 LEU ALA PHE VAL ASP VAL PRO ASN ASP SER PRO PHE GLN SEQRES 6 A 323 ILE VAL LYS ASN PRO ARG SER VAL GLY LYS ALA ASN GLU SEQRES 7 A 323 GLN LEU ALA ALA VAL VAL ALA GLU THR GLN LYS ASN GLY SEQRES 8 A 323 THR ILE SER VAL VAL LEU GLY GLY ASP HIS SER MET ALA SEQRES 9 A 323 ILE GLY SER ILE SER GLY HIS ALA ARG VAL HIS PRO ASP SEQRES 10 A 323 LEU CYS VAL ILE TRP VAL ASP ALA HIS THR ASP ILE ASN SEQRES 11 A 323 THR PRO LEU THR THR SER SER GLY ASN LEU HIS GLY GLN SEQRES 12 A 323 PRO VAL ALA PHE LEU LEU LYS GLU LEU LYS GLY LYS PHE SEQRES 13 A 323 PRO ASP VAL PRO GLY PHE SER TRP VAL THR PRO CYS ILE SEQRES 14 A 323 SER ALA LYS ASP ILE VAL TYR ILE GLY LEU ARG ASP VAL SEQRES 15 A 323 ASP PRO GLY GLU HIS TYR ILE ILE LYS THR LEU GLY ILE SEQRES 16 A 323 LYS TYR PHE SER MET THR GLU VAL ASP LYS LEU GLY ILE SEQRES 17 A 323 GLY LYS VAL MET GLU GLU THR PHE SER TYR LEU LEU GLY SEQRES 18 A 323 ARG LYS LYS ARG PRO ILE HIS LEU SER PHE ASP VAL ASP SEQRES 19 A 323 GLY LEU ASP PRO VAL PHE THR PRO ALA THR GLY THR PRO SEQRES 20 A 323 VAL VAL GLY GLY LEU SER TYR ARG GLU GLY LEU TYR ILE SEQRES 21 A 323 THR GLU GLU ILE TYR LYS THR GLY LEU LEU SER GLY LEU SEQRES 22 A 323 ASP ILE MET GLU VAL ASN PRO THR LEU GLY LYS THR PRO SEQRES 23 A 323 GLU GLU VAL THR ARG THR VAL ASN THR ALA VAL ALA LEU SEQRES 24 A 323 THR LEU SER CYS PHE GLY THR LYS LYS GLU GLY ASN HIS SEQRES 25 A 323 LYS PRO GLU THR ASP TYR LEU LYS PRO PRO LYS SEQRES 1 B 323 MET SER SER LYS PRO LYS PRO ILE GLU ILE ILE GLY ALA SEQRES 2 B 323 PRO PHE SER LYS GLY GLN PRO ARG GLY GLY VAL GLU LYS SEQRES 3 B 323 GLY PRO ALA ALA LEU ARG LYS ALA GLY LEU VAL GLU LYS SEQRES 4 B 323 LEU LYS GLU THR GLU TYR ASN VAL ARG ASP HIS GLY ASP SEQRES 5 B 323 LEU ALA PHE VAL ASP VAL PRO ASN ASP SER PRO PHE GLN SEQRES 6 B 323 ILE VAL LYS ASN PRO ARG SER VAL GLY LYS ALA ASN GLU SEQRES 7 B 323 GLN LEU ALA ALA VAL VAL ALA GLU THR GLN LYS ASN GLY SEQRES 8 B 323 THR ILE SER VAL VAL LEU GLY GLY ASP HIS SER MET ALA SEQRES 9 B 323 ILE GLY SER ILE SER GLY HIS ALA ARG VAL HIS PRO ASP SEQRES 10 B 323 LEU CYS VAL ILE TRP VAL ASP ALA HIS THR ASP ILE ASN SEQRES 11 B 323 THR PRO LEU THR THR SER SER GLY ASN LEU HIS GLY GLN SEQRES 12 B 323 PRO VAL ALA PHE LEU LEU LYS GLU LEU LYS GLY LYS PHE SEQRES 13 B 323 PRO ASP VAL PRO GLY PHE SER TRP VAL THR PRO CYS ILE SEQRES 14 B 323 SER ALA LYS ASP ILE VAL TYR ILE GLY LEU ARG ASP VAL SEQRES 15 B 323 ASP PRO GLY GLU HIS TYR ILE ILE LYS THR LEU GLY ILE SEQRES 16 B 323 LYS TYR PHE SER MET THR GLU VAL ASP LYS LEU GLY ILE SEQRES 17 B 323 GLY LYS VAL MET GLU GLU THR PHE SER TYR LEU LEU GLY SEQRES 18 B 323 ARG LYS LYS ARG PRO ILE HIS LEU SER PHE ASP VAL ASP SEQRES 19 B 323 GLY LEU ASP PRO VAL PHE THR PRO ALA THR GLY THR PRO SEQRES 20 B 323 VAL VAL GLY GLY LEU SER TYR ARG GLU GLY LEU TYR ILE SEQRES 21 B 323 THR GLU GLU ILE TYR LYS THR GLY LEU LEU SER GLY LEU SEQRES 22 B 323 ASP ILE MET GLU VAL ASN PRO THR LEU GLY LYS THR PRO SEQRES 23 B 323 GLU GLU VAL THR ARG THR VAL ASN THR ALA VAL ALA LEU SEQRES 24 B 323 THR LEU SER CYS PHE GLY THR LYS LYS GLU GLY ASN HIS SEQRES 25 B 323 LYS PRO GLU THR ASP TYR LEU LYS PRO PRO LYS SEQRES 1 C 323 MET SER SER LYS PRO LYS PRO ILE GLU ILE ILE GLY ALA SEQRES 2 C 323 PRO PHE SER LYS GLY GLN PRO ARG GLY GLY VAL GLU LYS SEQRES 3 C 323 GLY PRO ALA ALA LEU ARG LYS ALA GLY LEU VAL GLU LYS SEQRES 4 C 323 LEU LYS GLU THR GLU TYR ASN VAL ARG ASP HIS GLY ASP SEQRES 5 C 323 LEU ALA PHE VAL ASP VAL PRO ASN ASP SER PRO PHE GLN SEQRES 6 C 323 ILE VAL LYS ASN PRO ARG SER VAL GLY LYS ALA ASN GLU SEQRES 7 C 323 GLN LEU ALA ALA VAL VAL ALA GLU THR GLN LYS ASN GLY SEQRES 8 C 323 THR ILE SER VAL VAL LEU GLY GLY ASP HIS SER MET ALA SEQRES 9 C 323 ILE GLY SER ILE SER GLY HIS ALA ARG VAL HIS PRO ASP SEQRES 10 C 323 LEU CYS VAL ILE TRP VAL ASP ALA HIS THR ASP ILE ASN SEQRES 11 C 323 THR PRO LEU THR THR SER SER GLY ASN LEU HIS GLY GLN SEQRES 12 C 323 PRO VAL ALA PHE LEU LEU LYS GLU LEU LYS GLY LYS PHE SEQRES 13 C 323 PRO ASP VAL PRO GLY PHE SER TRP VAL THR PRO CYS ILE SEQRES 14 C 323 SER ALA LYS ASP ILE VAL TYR ILE GLY LEU ARG ASP VAL SEQRES 15 C 323 ASP PRO GLY GLU HIS TYR ILE ILE LYS THR LEU GLY ILE SEQRES 16 C 323 LYS TYR PHE SER MET THR GLU VAL ASP LYS LEU GLY ILE SEQRES 17 C 323 GLY LYS VAL MET GLU GLU THR PHE SER TYR LEU LEU GLY SEQRES 18 C 323 ARG LYS LYS ARG PRO ILE HIS LEU SER PHE ASP VAL ASP SEQRES 19 C 323 GLY LEU ASP PRO VAL PHE THR PRO ALA THR GLY THR PRO SEQRES 20 C 323 VAL VAL GLY GLY LEU SER TYR ARG GLU GLY LEU TYR ILE SEQRES 21 C 323 THR GLU GLU ILE TYR LYS THR GLY LEU LEU SER GLY LEU SEQRES 22 C 323 ASP ILE MET GLU VAL ASN PRO THR LEU GLY LYS THR PRO SEQRES 23 C 323 GLU GLU VAL THR ARG THR VAL ASN THR ALA VAL ALA LEU SEQRES 24 C 323 THR LEU SER CYS PHE GLY THR LYS LYS GLU GLY ASN HIS SEQRES 25 C 323 LYS PRO GLU THR ASP TYR LEU LYS PRO PRO LYS HET MN A 500 1 HET MN A 501 1 HET MN B 502 1 HET MN B 503 1 HET MN C 504 1 HET MN C 505 1 HETNAM MN MANGANESE (II) ION FORMUL 4 MN 6(MN 2+) FORMUL 10 HOH *29(H2 O) HELIX 1 1 GLY A 23 GLU A 25 5 3 HELIX 2 2 LYS A 26 ALA A 34 1 9 HELIX 3 3 GLY A 35 GLU A 42 1 8 HELIX 4 4 ASN A 69 ASN A 90 1 22 HELIX 5 5 ASP A 100 SER A 102 5 3 HELIX 6 6 MET A 103 HIS A 115 1 13 HELIX 7 7 ASN A 139 GLY A 142 5 4 HELIX 8 8 GLN A 143 LEU A 149 1 7 HELIX 9 9 ASP A 183 LEU A 193 1 11 HELIX 10 10 MET A 200 GLY A 207 1 8 HELIX 11 11 GLY A 207 GLY A 221 1 15 HELIX 12 12 SER A 253 GLY A 268 1 16 HELIX 13 13 THR A 285 PHE A 304 1 20 HELIX 14 14 GLY B 23 GLU B 25 5 3 HELIX 15 15 LYS B 26 ALA B 34 1 9 HELIX 16 16 GLY B 35 GLU B 42 1 8 HELIX 17 17 ASN B 69 ASN B 90 1 22 HELIX 18 18 ASP B 100 SER B 102 5 3 HELIX 19 19 MET B 103 HIS B 115 1 13 HELIX 20 20 ASN B 139 GLY B 142 5 4 HELIX 21 21 GLN B 143 LEU B 149 1 7 HELIX 22 22 ASP B 183 LEU B 193 1 11 HELIX 23 23 MET B 200 GLY B 207 1 8 HELIX 24 24 GLY B 207 GLY B 221 1 15 HELIX 25 25 SER B 253 GLY B 268 1 16 HELIX 26 26 THR B 285 PHE B 304 1 20 HELIX 27 27 GLY C 23 GLU C 25 5 3 HELIX 28 28 LYS C 26 ALA C 34 1 9 HELIX 29 29 GLY C 35 GLU C 42 1 8 HELIX 30 30 ASN C 69 ASN C 90 1 22 HELIX 31 31 ASP C 100 SER C 102 5 3 HELIX 32 32 MET C 103 HIS C 115 1 13 HELIX 33 33 ASN C 139 GLY C 142 5 4 HELIX 34 34 GLN C 143 LEU C 149 1 7 HELIX 35 35 ASP C 183 LEU C 193 1 11 HELIX 36 36 MET C 200 GLY C 207 1 8 HELIX 37 37 GLY C 207 GLY C 221 1 15 HELIX 38 38 SER C 253 GLY C 268 1 16 HELIX 39 39 THR C 285 PHE C 304 1 20 SHEET 1 A 8 ASN A 46 ASP A 52 0 SHEET 2 A 8 PRO A 7 ALA A 13 1 N ILE A 8 O ASN A 46 SHEET 3 A 8 ILE A 93 GLY A 98 1 N ILE A 93 O PRO A 7 SHEET 4 A 8 LEU A 270 MET A 276 1 O SER A 271 N SER A 94 SHEET 5 A 8 ILE A 227 ASP A 232 1 O ILE A 227 N SER A 271 SHEET 6 A 8 CYS A 119 VAL A 123 1 O CYS A 119 N HIS A 228 SHEET 7 A 8 ILE A 174 GLY A 178 1 O VAL A 175 N TRP A 122 SHEET 8 A 8 LYS A 196 SER A 199 1 O LYS A 196 N TYR A 176 SHEET 1 B 8 ASN B 46 ASP B 52 0 SHEET 2 B 8 PRO B 7 ALA B 13 1 N ILE B 8 O ASN B 46 SHEET 3 B 8 ILE B 93 GLY B 98 1 N ILE B 93 O PRO B 7 SHEET 4 B 8 LEU B 270 MET B 276 1 O SER B 271 N SER B 94 SHEET 5 B 8 ILE B 227 ASP B 232 1 O ILE B 227 N SER B 271 SHEET 6 B 8 CYS B 119 VAL B 123 1 O CYS B 119 N HIS B 228 SHEET 7 B 8 ILE B 174 GLY B 178 1 O VAL B 175 N TRP B 122 SHEET 8 B 8 LYS B 196 SER B 199 1 O LYS B 196 N TYR B 176 SHEET 1 C 8 ASN C 46 ASP C 52 0 SHEET 2 C 8 PRO C 7 ALA C 13 1 N ILE C 8 O ASN C 46 SHEET 3 C 8 ILE C 93 GLY C 98 1 N ILE C 93 O PRO C 7 SHEET 4 C 8 LEU C 270 MET C 276 1 O SER C 271 N SER C 94 SHEET 5 C 8 ILE C 227 ASP C 232 1 O ILE C 227 N SER C 271 SHEET 6 C 8 CYS C 119 VAL C 123 1 O CYS C 119 N HIS C 228 SHEET 7 C 8 ILE C 174 GLY C 178 1 O VAL C 175 N TRP C 122 SHEET 8 C 8 LYS C 196 SER C 199 1 O LYS C 196 N TYR C 176 LINK MN MN A 500 OD2 ASP A 128 1555 1555 1.90 LINK MN MN A 500 OD2 ASP A 232 1555 1555 2.07 LINK MN MN A 501 ND1 HIS A 126 1555 1555 1.95 LINK MN MN B 502 OD2 ASP B 128 1555 1555 1.90 LINK MN MN B 502 OD2 ASP B 232 1555 1555 2.07 LINK MN MN B 503 ND1 HIS B 126 1555 1555 1.95 LINK MN MN C 504 OD2 ASP C 128 1555 1555 1.90 LINK MN MN C 504 OD2 ASP C 232 1555 1555 2.07 LINK MN MN C 505 ND1 HIS C 126 1555 1555 1.95 LINK MN MN A 500 ND1 HIS A 101 1555 1555 2.42 LINK MN MN A 500 OD2 ASP A 124 1555 1555 2.25 LINK MN MN A 501 OD1 ASP A 234 1555 1555 2.73 LINK MN MN A 501 OD2 ASP A 234 1555 1555 2.35 LINK MN MN A 501 OD1 ASP A 124 1555 1555 2.23 LINK MN MN A 501 OD2 ASP A 232 1555 1555 2.41 LINK MN MN A 501 O HOH A 601 1555 1555 2.68 LINK MN MN B 502 ND1 HIS B 101 1555 1555 2.42 LINK MN MN B 502 OD2 ASP B 124 1555 1555 2.25 LINK MN MN B 503 OD1 ASP B 234 1555 1555 2.73 LINK MN MN B 503 OD2 ASP B 234 1555 1555 2.35 LINK MN MN B 503 OD2 ASP B 232 1555 1555 2.41 LINK MN MN B 503 O HOH B 611 1555 1555 2.68 LINK MN MN B 503 OD1 ASP B 124 1555 1555 2.23 LINK MN MN C 504 OD2 ASP C 124 1555 1555 2.25 LINK MN MN C 504 ND1 HIS C 101 1555 1555 2.42 LINK MN MN C 505 OD1 ASP C 124 1555 1555 2.23 LINK MN MN C 505 OD2 ASP C 232 1555 1555 2.41 LINK MN MN C 505 OD1 ASP C 234 1555 1555 2.73 LINK MN MN C 505 OD2 ASP C 234 1555 1555 2.35 LINK MN MN C 505 O HOH C 620 1555 1555 2.68 CISPEP 1 GLY A 98 GLY A 99 0 -0.07 CISPEP 2 GLY B 98 GLY B 99 0 -0.10 CISPEP 3 GLY C 98 GLY C 99 0 -0.03 SITE 1 AC1 5 HIS A 101 ASP A 124 ASP A 128 ASP A 232 SITE 2 AC1 5 MN A 501 SITE 1 AC2 7 ASP A 124 HIS A 126 ASP A 232 ASP A 234 SITE 2 AC2 7 THR A 246 MN A 500 HOH A 601 SITE 1 AC3 5 HIS B 101 ASP B 124 ASP B 128 ASP B 232 SITE 2 AC3 5 MN B 503 SITE 1 AC4 7 ASP B 124 HIS B 126 ASP B 232 ASP B 234 SITE 2 AC4 7 THR B 246 MN B 502 HOH B 611 SITE 1 AC5 5 HIS C 101 ASP C 124 ASP C 128 ASP C 232 SITE 2 AC5 5 MN C 505 SITE 1 AC6 7 ASP C 124 HIS C 126 ASP C 232 ASP C 234 SITE 2 AC6 7 THR C 246 MN C 504 HOH C 620 CRYST1 87.860 87.860 112.100 90.00 90.00 120.00 P 32 9 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011382 0.006571 0.000000 0.00000 SCALE2 0.000000 0.013143 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008921 0.00000 MASTER 433 0 6 39 24 0 12 6 0 0 0 75 END