HEADER DE NOVO PROTEIN 18-DEC-00 1HQJ TITLE CRYSTAL STRUCTURE OF A DE NOVO DESIGNED TRIMERIC COILED-COIL PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: SIN-ASP-GLU-LEU-GLU-ALA-ARG-ILE-ARG-GLU-LEU-GLU-ALA-ARG- COMPND 3 ILE-LYS-NH2; COMPND 4 CHAIN: A, B, C, D, E, F, G, H, I, J, K, L; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 4 ORGANISM_TAXID: 32630; SOURCE 5 OTHER_DETAILS: NEOSYSTEM KEYWDS COILED COIL, DE NOVO DESIGN, ALPHA-HELIX, TRIMER, DE NOVO PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR P.BURKHARD,M.MEIER,A.LUSTIG REVDAT 6 24-JUL-19 1HQJ 1 COMPND REMARK LINK REVDAT 5 10-OCT-18 1HQJ 1 COMPND SOURCE REVDAT 4 03-OCT-18 1HQJ 1 REMARK REVDAT 3 04-OCT-17 1HQJ 1 REMARK REVDAT 2 24-FEB-09 1HQJ 1 VERSN REVDAT 1 14-MAR-01 1HQJ 0 JRNL AUTH P.BURKHARD,M.MEIER,A.LUSTIG JRNL TITL DESIGN OF A MINIMAL PROTEIN OLIGOMERIZATION DOMAIN BY A JRNL TITL 2 STRUCTURAL APPROACH. JRNL REF PROTEIN SCI. V. 9 2294 2000 JRNL REFN ISSN 0961-8368 JRNL PMID 11206050 REMARK 2 REMARK 2 RESOLUTION. 1.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : SHELXL REMARK 3 AUTHORS : G.M.SHELDRICK REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (NO CUTOFF). REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : 0.170 REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 4131 REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL FOR DATA WITH F>4SIG(F). REMARK 3 R VALUE (WORKING + TEST SET, F>4SIG(F)) : 0.166 REMARK 3 R VALUE (WORKING SET, F>4SIG(F)) : NULL REMARK 3 FREE R VALUE (F>4SIG(F)) : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%, F>4SIG(F)) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (F>4SIG(F)) : 5 REMARK 3 TOTAL NUMBER OF REFLECTIONS (F>4SIG(F)) : 3493 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1550 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 113 REMARK 3 SOLVENT ATOMS : 147 REMARK 3 REMARK 3 MODEL REFINEMENT. REMARK 3 OCCUPANCY SUM OF NON-HYDROGEN ATOMS : 1815.0 REMARK 3 OCCUPANCY SUM OF HYDROGEN ATOMS : 1384.0 REMARK 3 NUMBER OF DISCRETELY DISORDERED RESIDUES : 1 REMARK 3 NUMBER OF LEAST-SQUARES PARAMETERS : 1680 REMARK 3 NUMBER OF RESTRAINTS : 2133 REMARK 3 REMARK 3 RMS DEVIATIONS FROM RESTRAINT TARGET VALUES. REMARK 3 BOND LENGTHS (A) : 0.004 REMARK 3 ANGLE DISTANCES (A) : 0.900 REMARK 3 SIMILAR DISTANCES (NO TARGET VALUES) (A) : NULL REMARK 3 DISTANCES FROM RESTRAINT PLANES (A) : NULL REMARK 3 ZERO CHIRAL VOLUMES (A**3) : NULL REMARK 3 NON-ZERO CHIRAL VOLUMES (A**3) : NULL REMARK 3 ANTI-BUMPING DISTANCE RESTRAINTS (A) : NULL REMARK 3 RIGID-BOND ADP COMPONENTS (A**2) : NULL REMARK 3 SIMILAR ADP COMPONENTS (A**2) : NULL REMARK 3 APPROXIMATELY ISOTROPIC ADPS (A**2) : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED: NULL REMARK 3 REMARK 3 STEREOCHEMISTRY TARGET VALUES : ENGH AND HUBER REMARK 3 SPECIAL CASE: NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1HQJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-DEC-00. REMARK 100 THE DEPOSITION ID IS D_1000012520. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-NOV-99 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X11 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.951 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : WIGGLER REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : 1.200 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 81.2 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.58000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 29.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.74 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE, SODIUM ACETATE, PH REMARK 280 5.6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 22.16700 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 40.52150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 22.43700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 40.52150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 22.16700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 22.43700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE PEPTIDE IS A TRIMER AT HIGH IONIC STRENGTH REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2880 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 3670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2770 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 3760 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 3930 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, H, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2850 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 3760 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: J, K, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DODECAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 15210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11360 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -89.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, H, I, J, K, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 -44.33400 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 6 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 6 CD NE CZ NH1 NH2 REMARK 470 ARG D 6 CG CD NE CZ NH1 NH2 REMARK 470 ARG F 6 CG CD NE CZ NH1 NH2 REMARK 470 ARG G 6 CG CD NE CZ NH1 NH2 REMARK 470 ARG H 6 CG CD NE CZ NH1 NH2 REMARK 470 ARG I 6 CG CD NE CZ NH1 NH2 REMARK 470 ARG J 6 CG CD NE CZ NH1 NH2 REMARK 470 ARG K 6 CG CD NE CZ NH1 NH2 REMARK 470 ARG L 6 CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CD GLU H 3 PB PB H 2008 1.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 14 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG G 14 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 PB A2003 PB REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH C1011 O REMARK 620 2 HOH C1007 O 54.6 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 PB D2002 PB REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SIN D 1 O3 REMARK 620 2 SIN D 1 O4 39.9 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 PB E2007 PB REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU E 10 OE1 REMARK 620 2 HOH E2019 O 92.7 REMARK 620 3 ASP H 2 OD1 135.7 108.6 REMARK 620 4 GLU E 10 OE2 57.9 59.2 164.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 PB F2004 PB REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH F2011 O REMARK 620 2 ASP F 2 OD2 162.5 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 PB G2001 PB REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH G2008 O REMARK 620 2 SIN K 1 O4 146.2 REMARK 620 3 SIN K 1 O3 168.4 41.0 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 PB H2008 PB REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SIN H 1 O4 REMARK 620 2 SIN H 1 O3 41.2 REMARK 620 3 GLU H 3 OE2 74.4 92.6 REMARK 620 4 GLU H 3 OE1 69.4 108.1 82.8 REMARK 620 5 GLU F 10 OE2 135.9 154.7 111.1 68.1 REMARK 620 6 GLU F 10 OE1 128.4 163.9 71.4 69.0 40.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 PB I2006 PB REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH H2020 O REMARK 620 2 HOH H2013 O 58.1 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 PB K2005 PB REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SIN A 1 O3 REMARK 620 2 HOH A2008 O 63.6 REMARK 620 3 LYS K 16 NZ 102.1 67.9 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 PB L2009 PB REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 5 OE1 REMARK 620 2 GLU L 3 OE2 156.9 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 F 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 I 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PB G 2001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PB D 2002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PB A 2003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PB F 2004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PB K 2005 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PB I 2006 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PB E 2007 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PB H 2008 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PB L 2009 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SIN A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SIN B 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SIN C 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SIN D 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SIN E 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SIN F 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SIN G 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SIN H 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SIN I 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SIN J 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SIN K 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SIN L 1 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1D7M RELATED DB: PDB REMARK 900 THE COILED-COIL TRIGGER SITE OF THE ROD DOMAIN OF CORTEXILLIN I REMARK 900 RELATED ID: 1GCM RELATED DB: PDB REMARK 900 CONTROL PROTEIN GCN4, AMINO ACID BIOSYNTHESIS REGULATORY PROTEIN; REMARK 900 ENGINEERED: YES; MUTATION: L5I, V9I, L12I, N16I, L19I, V23I, L26I, REMARK 900 V30I (I AT HEPTAD A POSITIONS, I AT HEPTAD D POSITIONS) DBREF 1HQJ A 2 16 PDB 1HQJ 1HQJ 2 16 DBREF 1HQJ B 2 16 PDB 1HQJ 1HQJ 2 16 DBREF 1HQJ C 2 16 PDB 1HQJ 1HQJ 2 16 DBREF 1HQJ D 2 16 PDB 1HQJ 1HQJ 2 16 DBREF 1HQJ E 2 16 PDB 1HQJ 1HQJ 2 16 DBREF 1HQJ F 2 16 PDB 1HQJ 1HQJ 2 16 DBREF 1HQJ G 2 16 PDB 1HQJ 1HQJ 2 16 DBREF 1HQJ H 2 16 PDB 1HQJ 1HQJ 2 16 DBREF 1HQJ I 2 16 PDB 1HQJ 1HQJ 2 16 DBREF 1HQJ J 2 16 PDB 1HQJ 1HQJ 2 16 DBREF 1HQJ K 2 16 PDB 1HQJ 1HQJ 2 16 DBREF 1HQJ L 2 16 PDB 1HQJ 1HQJ 2 16 SEQRES 1 A 15 ASP GLU LEU GLU ARG ARG ILE ARG GLU LEU GLU ALA ARG SEQRES 2 A 15 ILE LYS SEQRES 1 B 15 ASP GLU LEU GLU ARG ARG ILE ARG GLU LEU GLU ALA ARG SEQRES 2 B 15 ILE LYS SEQRES 1 C 15 ASP GLU LEU GLU ARG ARG ILE ARG GLU LEU GLU ALA ARG SEQRES 2 C 15 ILE LYS SEQRES 1 D 15 ASP GLU LEU GLU ARG ARG ILE ARG GLU LEU GLU ALA ARG SEQRES 2 D 15 ILE LYS SEQRES 1 E 15 ASP GLU LEU GLU ARG ARG ILE ARG GLU LEU GLU ALA ARG SEQRES 2 E 15 ILE LYS SEQRES 1 F 15 ASP GLU LEU GLU ARG ARG ILE ARG GLU LEU GLU ALA ARG SEQRES 2 F 15 ILE LYS SEQRES 1 G 15 ASP GLU LEU GLU ARG ARG ILE ARG GLU LEU GLU ALA ARG SEQRES 2 G 15 ILE LYS SEQRES 1 H 15 ASP GLU LEU GLU ARG ARG ILE ARG GLU LEU GLU ALA ARG SEQRES 2 H 15 ILE LYS SEQRES 1 I 15 ASP GLU LEU GLU ARG ARG ILE ARG GLU LEU GLU ALA ARG SEQRES 2 I 15 ILE LYS SEQRES 1 J 15 ASP GLU LEU GLU ARG ARG ILE ARG GLU LEU GLU ALA ARG SEQRES 2 J 15 ILE LYS SEQRES 1 K 15 ASP GLU LEU GLU ARG ARG ILE ARG GLU LEU GLU ALA ARG SEQRES 2 K 15 ILE LYS SEQRES 1 L 15 ASP GLU LEU GLU ARG ARG ILE ARG GLU LEU GLU ALA ARG SEQRES 2 L 15 ILE LYS HET PB A2003 1 HET SIN A 1 7 HET SO4 B1001 5 HET SIN B 1 7 HET SO4 C1004 5 HET SIN C 1 7 HET PB D2002 1 HET SIN D 1 7 HET PB E2007 1 HET SIN E 1 7 HET SO4 F1002 5 HET PB F2004 1 HET SIN F 1 7 HET PB G2001 1 HET SIN G 1 7 HET PB H2008 1 HET SIN H 1 7 HET SO4 I1003 5 HET PB I2006 1 HET SIN I 1 7 HET SIN J 1 7 HET PB K2005 1 HET SIN K 1 7 HET PB L2009 1 HET SIN L 1 7 HETNAM PB LEAD (II) ION HETNAM SIN SUCCINIC ACID HETNAM SO4 SULFATE ION FORMUL 13 PB 9(PB 2+) FORMUL 14 SIN 12(C4 H6 O4) FORMUL 15 SO4 4(O4 S 2-) FORMUL 38 HOH *147(H2 O) HELIX 1 1 ASP A 2 LYS A 16 1 15 HELIX 2 2 ASP B 2 LYS B 16 1 15 HELIX 3 3 ASP C 2 LYS C 16 1 15 HELIX 4 4 ASP D 2 LYS D 16 1 15 HELIX 5 5 ASP E 2 LYS E 16 1 15 HELIX 6 6 ASP F 2 LYS F 16 1 15 HELIX 7 7 ASP G 2 LYS G 16 1 15 HELIX 8 8 ASP H 2 LYS H 16 1 15 HELIX 9 9 ASP I 2 LYS I 16 1 15 HELIX 10 10 ASP J 2 LYS J 16 1 15 HELIX 11 11 ASP K 2 LYS K 16 1 15 HELIX 12 12 ASP L 2 LYS L 16 1 15 LINK N ASP A 2 C1 SIN A 1 1555 1555 1.33 LINK N ASP B 2 C1 SIN B 1 1555 1555 1.33 LINK N ASP C 2 C1 SIN C 1 1555 1555 1.33 LINK N ASP D 2 C1 SIN D 1 1555 1555 1.33 LINK N ASP E 2 C1 SIN E 1 1555 1555 1.33 LINK N ASP F 2 C1 SIN F 1 1555 1555 1.33 LINK N ASP G 2 C1 SIN G 1 1555 1555 1.33 LINK N ASP H 2 C1 SIN H 1 1555 1555 1.33 LINK N ASP I 2 C1 SIN I 1 1555 1555 1.33 LINK N ASP J 2 C1 SIN J 1 1555 1555 1.33 LINK N ASP K 2 C1 SIN K 1 1555 1555 1.33 LINK N ASP L 2 C1 SIN L 1 1555 1555 1.33 LINK PB PB A2003 O HOH C1011 1555 1555 2.34 LINK PB PB A2003 O HOH C1007 1555 1555 2.99 LINK PB PB D2002 O3 SIN D 1 1555 1555 2.15 LINK PB PB D2002 O4 SIN D 1 1555 1555 3.36 LINK PB PB E2007 OE1 GLU E 10 1555 1555 2.25 LINK PB PB E2007 O HOH E2019 1555 1555 2.34 LINK PB PB E2007 OD1 ASP H 2 1555 1555 2.31 LINK PB PB E2007 OE2 GLU E 10 1555 1555 2.28 LINK PB PB F2004 O HOH F2011 1555 1555 3.40 LINK PB PB F2004 OD2 ASP F 2 1555 1555 2.93 LINK PB PB G2001 O HOH G2008 1555 1555 2.81 LINK O4 SIN H 1 CG GLU H 3 1555 1555 1.66 LINK PB PB H2008 O4 SIN H 1 1555 1555 3.33 LINK PB PB H2008 O3 SIN H 1 1555 1555 2.46 LINK PB PB H2008 OE2 GLU H 3 1555 1555 1.50 LINK PB PB H2008 OE1 GLU H 3 1555 1555 1.80 LINK PB PB I2006 O HOH H2020 1555 1555 2.54 LINK PB PB I2006 O HOH H2013 1555 1555 3.02 LINK PB PB K2005 O3 SIN A 1 1555 1555 2.65 LINK PB PB K2005 O HOH A2008 1555 1555 2.50 LINK PB PB K2005 NZ LYS K 16 1555 1555 2.51 LINK PB PB L2009 OE1 GLU A 5 1555 1555 3.23 LINK PB PB L2009 OE2 GLU L 3 1555 1555 2.57 LINK PB PB G2001 O4 SIN K 1 1555 1545 3.32 LINK PB PB G2001 O3 SIN K 1 1555 1545 2.29 LINK PB PB H2008 OE2 GLU F 10 1555 4455 3.39 LINK PB PB H2008 OE1 GLU F 10 1555 4455 2.55 SITE 1 AC1 3 ARG B 14 ARG J 9 ARG K 7 SITE 1 AC2 5 ARG D 7 ARG F 9 ARG G 14 HOH G2008 SITE 2 AC2 5 LYS I 16 SITE 1 AC3 4 ARG H 9 ARG I 7 LYS K 16 ARG L 14 SITE 1 AC4 3 ARG A 7 ARG C 9 ARG E 14 SITE 1 AC5 3 HOH G2008 SIN K 1 LEU K 4 SITE 1 AC6 2 SIN D 1 LEU D 4 SITE 1 AC7 3 GLU A 10 HOH C1007 HOH C1011 SITE 1 AC8 1 ASP F 2 SITE 1 AC9 3 SIN A 1 HOH A2008 LYS K 16 SITE 1 BC1 3 HOH H2013 HOH H2020 GLU I 10 SITE 1 BC2 3 GLU E 10 HOH E2019 ASP H 2 SITE 1 BC3 3 GLU F 10 SIN H 1 GLU H 3 SITE 1 BC4 2 GLU A 5 GLU L 3 SITE 1 BC5 9 ASP A 2 GLU A 3 LEU A 4 GLU A 5 SITE 2 BC5 9 HOH A2007 HOH A2008 GLU K 12 PB K2005 SITE 3 BC5 9 ARG L 7 SITE 1 BC6 7 ASP B 2 GLU B 3 LEU B 4 GLU B 5 SITE 2 BC6 7 HOH B1011 ASP L 2 GLU L 3 SITE 1 BC7 9 ASP C 2 GLU C 3 LEU C 4 GLU C 5 SITE 2 BC7 9 HOH C1010 HOH C1014 HOH C1016 ARG L 6 SITE 3 BC7 9 GLU L 10 SITE 1 BC8 9 GLU A 12 HOH A2009 HOH A2010 ARG B 7 SITE 2 BC8 9 ASP D 2 GLU D 3 LEU D 4 GLU D 5 SITE 3 BC8 9 PB D2002 SITE 1 BC9 6 GLU B 3 ASP E 2 GLU E 3 LEU E 4 SITE 2 BC9 6 GLU E 5 HOH E2016 SITE 1 CC1 10 ARG B 6 HOH B1003 LEU D 4 HOH E2020 SITE 2 CC1 10 ASP F 2 GLU F 3 LEU F 4 GLU F 5 SITE 3 CC1 10 HOH F2009 HOH F2010 SITE 1 CC2 9 ASP E 2 GLU E 3 ARG E 6 ASP G 2 SITE 2 CC2 9 GLU G 3 LEU G 4 GLU G 5 HOH G2004 SITE 3 CC2 9 HOH G2011 SITE 1 CC3 5 ASP H 2 GLU H 3 LEU H 4 GLU H 5 SITE 2 CC3 5 PB H2008 SITE 1 CC4 8 LYS D 16 ARG E 6 GLU E 10 HOH E2015 SITE 2 CC4 8 ASP I 2 GLU I 3 LEU I 4 GLU I 5 SITE 1 CC5 9 ARG G 6 HOH G2006 HOH G2010 HOH G2012 SITE 2 CC5 9 ASP J 2 GLU J 3 LEU J 4 GLU J 5 SITE 3 CC5 9 LEU K 4 SITE 1 CC6 9 ARG G 7 PB G2001 GLU I 12 HOH I2009 SITE 2 CC6 9 HOH I2012 ASP K 2 GLU K 3 LEU K 4 SITE 3 CC6 9 GLU K 5 SITE 1 CC7 6 GLU G 3 HOH G2009 ASP L 2 GLU L 3 SITE 2 CC7 6 LEU L 4 GLU L 5 CRYST1 44.334 44.874 81.043 90.00 90.00 90.00 P 21 21 21 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022556 0.000000 0.000000 0.00000 SCALE2 0.000000 0.022285 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012339 0.00000 MASTER 462 0 25 12 0 0 45 6 0 0 0 24 END