HEADER HYDROLASE 16-DEC-00 1HQH TITLE CRYSTAL STRUCTURE OF THE BINUCLEAR MANGANESE METALLOENZYME TITLE 2 ARGINASE COMPLEXED WITH NOR-N-HYDROXY-L-ARGININE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ARGINASE 1; COMPND 3 CHAIN: A, B, C; COMPND 4 EC: 3.5.3.1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: NORWAY RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BINUCLEAR MANGANESE CLUSTER, SUBSTRATE ANALOGUE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR J.D.COX,E.CAMA,D.M.COLLELUORI,D.E.ASH,D.W.CHRISTIANSON REVDAT 3 24-FEB-09 1HQH 1 VERSN REVDAT 2 01-APR-03 1HQH 1 JRNL REVDAT 1 04-APR-01 1HQH 0 JRNL AUTH J.D.COX,E.CAMA,D.M.COLLELUORI,S.PETHE,J.L.BOUCHER, JRNL AUTH 2 D.MANSUY,D.E.ASH,D.W.CHRISTIANSON JRNL TITL MECHANISTIC AND METABOLIC INFERENCES FROM THE JRNL TITL 2 BINDING OF SUBSTRATE ANALOGUES AND PRODUCTS TO JRNL TITL 3 ARGINASE. JRNL REF BIOCHEMISTRY V. 40 2689 2001 JRNL REFN ISSN 0006-2960 JRNL PMID 11258880 JRNL DOI 10.1021/BI002318+ REMARK 1 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 22632 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.286 REMARK 3 FREE R VALUE : 0.259 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1074 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7185 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 42 REMARK 3 SOLVENT ATOMS : 21 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.50 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1HQH COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-DEC-00. REMARK 100 THE RCSB ID CODE IS RCSB012519. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-JUN-00 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : FILTER REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22632 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 2.500 REMARK 200 R MERGE (I) : 0.04500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 2.30 REMARK 200 R MERGE FOR SHELL (I) : 0.31900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8000, BICINE, MANGANESE REMARK 280 CHLORIDE, PH 8.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 74.93333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 37.46667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A TRIMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6050 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34060 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -53.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 SER A 3 REMARK 465 LYS A 4 REMARK 465 PRO A 5 REMARK 465 LYS A 320 REMARK 465 PRO A 321 REMARK 465 PRO A 322 REMARK 465 LYS A 323 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 SER B 3 REMARK 465 LYS B 4 REMARK 465 PRO B 5 REMARK 465 LYS B 320 REMARK 465 PRO B 321 REMARK 465 PRO B 322 REMARK 465 LYS B 323 REMARK 465 MET C 1 REMARK 465 SER C 2 REMARK 465 SER C 3 REMARK 465 LYS C 4 REMARK 465 PRO C 5 REMARK 465 LYS C 320 REMARK 465 PRO C 321 REMARK 465 PRO C 322 REMARK 465 LYS C 323 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 14 85.60 -44.88 REMARK 500 SER A 16 -3.45 -153.19 REMARK 500 VAL A 24 -32.37 -38.99 REMARK 500 LEU A 53 160.74 -48.23 REMARK 500 PHE A 64 89.73 -45.99 REMARK 500 GLN A 65 -127.35 72.34 REMARK 500 VAL A 67 126.33 -37.00 REMARK 500 ASN A 69 37.32 33.61 REMARK 500 SER A 107 -50.80 -27.75 REMARK 500 THR A 135 148.38 -34.68 REMARK 500 ASN A 139 99.59 -40.99 REMARK 500 HIS A 141 -4.59 -57.40 REMARK 500 GLN A 143 -15.41 -144.90 REMARK 500 PRO A 144 -49.12 -28.82 REMARK 500 GLU A 151 0.74 -60.39 REMARK 500 SER A 163 -33.74 -35.93 REMARK 500 PRO A 167 106.93 -44.89 REMARK 500 ALA A 171 6.05 -55.75 REMARK 500 ARG A 180 2.24 -157.20 REMARK 500 ILE A 208 -30.25 -38.54 REMARK 500 PHE A 216 -74.25 -69.50 REMARK 500 ARG A 222 -92.98 -78.15 REMARK 500 GLU A 277 -0.22 69.71 REMARK 500 PRO A 280 -0.19 -45.15 REMARK 500 PHE A 304 40.75 -105.15 REMARK 500 THR A 306 114.62 -34.19 REMARK 500 GLU A 315 -35.04 73.28 REMARK 500 PRO B 14 85.56 -44.82 REMARK 500 SER B 16 -3.47 -153.21 REMARK 500 VAL B 24 -32.40 -38.92 REMARK 500 LEU B 53 160.74 -48.22 REMARK 500 PHE B 64 89.72 -45.93 REMARK 500 GLN B 65 -127.38 72.30 REMARK 500 VAL B 67 126.33 -36.96 REMARK 500 ASN B 69 37.31 33.63 REMARK 500 SER B 107 -50.73 -27.79 REMARK 500 THR B 135 148.41 -34.70 REMARK 500 ASN B 139 99.60 -41.02 REMARK 500 HIS B 141 -4.55 -57.43 REMARK 500 GLN B 143 -15.38 -144.93 REMARK 500 PRO B 144 -49.11 -28.84 REMARK 500 GLU B 151 0.74 -60.39 REMARK 500 SER B 163 -33.72 -35.93 REMARK 500 PRO B 167 106.93 -44.90 REMARK 500 ALA B 171 6.04 -55.77 REMARK 500 ARG B 180 2.17 -157.18 REMARK 500 ILE B 208 -30.23 -38.56 REMARK 500 PHE B 216 -74.23 -69.52 REMARK 500 ARG B 222 -92.99 -78.13 REMARK 500 GLU B 277 -0.31 69.80 REMARK 500 PRO B 280 -0.26 -45.15 REMARK 500 PHE B 304 40.82 -105.19 REMARK 500 THR B 306 114.60 -34.15 REMARK 500 GLU B 315 -35.05 73.30 REMARK 500 PRO C 14 85.51 -44.82 REMARK 500 SER C 16 -3.42 -153.16 REMARK 500 VAL C 24 -32.37 -38.95 REMARK 500 LEU C 53 160.72 -48.25 REMARK 500 PHE C 64 89.72 -46.04 REMARK 500 GLN C 65 -127.35 72.34 REMARK 500 VAL C 67 126.35 -37.00 REMARK 500 ASN C 69 37.28 33.63 REMARK 500 SER C 107 -50.81 -27.79 REMARK 500 THR C 135 148.40 -34.65 REMARK 500 ASN C 139 99.56 -40.95 REMARK 500 HIS C 141 -4.57 -57.38 REMARK 500 GLN C 143 -15.40 -144.94 REMARK 500 PRO C 144 -49.08 -28.83 REMARK 500 GLU C 151 0.73 -60.41 REMARK 500 SER C 163 -33.72 -35.97 REMARK 500 PRO C 167 106.93 -44.89 REMARK 500 ALA C 171 6.13 -55.78 REMARK 500 ARG C 180 2.24 -157.18 REMARK 500 ILE C 208 -30.24 -38.53 REMARK 500 PHE C 216 -74.24 -69.48 REMARK 500 ARG C 222 -92.91 -78.17 REMARK 500 GLU C 277 -0.22 69.68 REMARK 500 PRO C 280 -0.20 -45.13 REMARK 500 PHE C 304 40.77 -105.13 REMARK 500 THR C 306 114.66 -34.26 REMARK 500 GLU C 315 -35.05 73.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 500 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 232 OD2 REMARK 620 2 NNH A 901 OH1 68.4 REMARK 620 3 ASP A 124 OD2 71.2 117.5 REMARK 620 4 ASP A 128 OD2 154.2 105.8 91.3 REMARK 620 5 HIS A 101 ND1 98.4 137.4 93.5 101.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 501 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 126 ND1 REMARK 620 2 ASP A 232 OD2 178.1 REMARK 620 3 ASP A 234 OD2 111.0 67.1 REMARK 620 4 NNH A 901 OH1 110.6 70.4 105.2 REMARK 620 5 ASP A 124 OD1 97.8 83.1 113.7 118.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 502 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 101 ND1 REMARK 620 2 ASP B 128 OD2 101.6 REMARK 620 3 ASP B 232 OD2 98.4 154.2 REMARK 620 4 NNH B 902 OH1 137.4 105.8 68.4 REMARK 620 5 ASP B 124 OD2 93.5 91.3 71.2 117.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 503 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 232 OD2 REMARK 620 2 ASP B 234 OD2 67.1 REMARK 620 3 NNH B 902 OH1 70.4 105.2 REMARK 620 4 ASP B 124 OD1 83.1 113.7 118.6 REMARK 620 5 HIS B 126 ND1 178.1 111.0 110.6 97.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN C 504 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 128 OD2 REMARK 620 2 HIS C 101 ND1 101.6 REMARK 620 3 ASP C 124 OD2 91.3 93.5 REMARK 620 4 ASP C 232 OD2 154.2 98.4 71.2 REMARK 620 5 NNH C 903 OH1 105.8 137.4 117.5 68.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN C 505 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 126 ND1 REMARK 620 2 ASP C 124 OD1 97.7 REMARK 620 3 ASP C 232 OD2 178.1 83.1 REMARK 620 4 ASP C 234 OD2 111.0 113.7 67.1 REMARK 620 5 NNH C 903 OH1 110.5 118.6 70.4 105.2 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 500 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 501 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 502 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 503 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN C 504 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN C 505 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NNH A 901 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NNH B 902 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NNH C 903 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1RLA RELATED DB: PDB REMARK 900 NATIVE ARGINASE DBREF 1HQH A 1 323 UNP P07824 ARGI1_RAT 1 323 DBREF 1HQH B 1 323 UNP P07824 ARGI1_RAT 1 323 DBREF 1HQH C 1 323 UNP P07824 ARGI1_RAT 1 323 SEQRES 1 A 323 MET SER SER LYS PRO LYS PRO ILE GLU ILE ILE GLY ALA SEQRES 2 A 323 PRO PHE SER LYS GLY GLN PRO ARG GLY GLY VAL GLU LYS SEQRES 3 A 323 GLY PRO ALA ALA LEU ARG LYS ALA GLY LEU VAL GLU LYS SEQRES 4 A 323 LEU LYS GLU THR GLU TYR ASN VAL ARG ASP HIS GLY ASP SEQRES 5 A 323 LEU ALA PHE VAL ASP VAL PRO ASN ASP SER PRO PHE GLN SEQRES 6 A 323 ILE VAL LYS ASN PRO ARG SER VAL GLY LYS ALA ASN GLU SEQRES 7 A 323 GLN LEU ALA ALA VAL VAL ALA GLU THR GLN LYS ASN GLY SEQRES 8 A 323 THR ILE SER VAL VAL LEU GLY GLY ASP HIS SER MET ALA SEQRES 9 A 323 ILE GLY SER ILE SER GLY HIS ALA ARG VAL HIS PRO ASP SEQRES 10 A 323 LEU CYS VAL ILE TRP VAL ASP ALA HIS THR ASP ILE ASN SEQRES 11 A 323 THR PRO LEU THR THR SER SER GLY ASN LEU HIS GLY GLN SEQRES 12 A 323 PRO VAL ALA PHE LEU LEU LYS GLU LEU LYS GLY LYS PHE SEQRES 13 A 323 PRO ASP VAL PRO GLY PHE SER TRP VAL THR PRO CYS ILE SEQRES 14 A 323 SER ALA LYS ASP ILE VAL TYR ILE GLY LEU ARG ASP VAL SEQRES 15 A 323 ASP PRO GLY GLU HIS TYR ILE ILE LYS THR LEU GLY ILE SEQRES 16 A 323 LYS TYR PHE SER MET THR GLU VAL ASP LYS LEU GLY ILE SEQRES 17 A 323 GLY LYS VAL MET GLU GLU THR PHE SER TYR LEU LEU GLY SEQRES 18 A 323 ARG LYS LYS ARG PRO ILE HIS LEU SER PHE ASP VAL ASP SEQRES 19 A 323 GLY LEU ASP PRO VAL PHE THR PRO ALA THR GLY THR PRO SEQRES 20 A 323 VAL VAL GLY GLY LEU SER TYR ARG GLU GLY LEU TYR ILE SEQRES 21 A 323 THR GLU GLU ILE TYR LYS THR GLY LEU LEU SER GLY LEU SEQRES 22 A 323 ASP ILE MET GLU VAL ASN PRO THR LEU GLY LYS THR PRO SEQRES 23 A 323 GLU GLU VAL THR ARG THR VAL ASN THR ALA VAL ALA LEU SEQRES 24 A 323 THR LEU SER CYS PHE GLY THR LYS ARG GLU GLY ASN HIS SEQRES 25 A 323 LYS PRO GLU THR ASP TYR LEU LYS PRO PRO LYS SEQRES 1 B 323 MET SER SER LYS PRO LYS PRO ILE GLU ILE ILE GLY ALA SEQRES 2 B 323 PRO PHE SER LYS GLY GLN PRO ARG GLY GLY VAL GLU LYS SEQRES 3 B 323 GLY PRO ALA ALA LEU ARG LYS ALA GLY LEU VAL GLU LYS SEQRES 4 B 323 LEU LYS GLU THR GLU TYR ASN VAL ARG ASP HIS GLY ASP SEQRES 5 B 323 LEU ALA PHE VAL ASP VAL PRO ASN ASP SER PRO PHE GLN SEQRES 6 B 323 ILE VAL LYS ASN PRO ARG SER VAL GLY LYS ALA ASN GLU SEQRES 7 B 323 GLN LEU ALA ALA VAL VAL ALA GLU THR GLN LYS ASN GLY SEQRES 8 B 323 THR ILE SER VAL VAL LEU GLY GLY ASP HIS SER MET ALA SEQRES 9 B 323 ILE GLY SER ILE SER GLY HIS ALA ARG VAL HIS PRO ASP SEQRES 10 B 323 LEU CYS VAL ILE TRP VAL ASP ALA HIS THR ASP ILE ASN SEQRES 11 B 323 THR PRO LEU THR THR SER SER GLY ASN LEU HIS GLY GLN SEQRES 12 B 323 PRO VAL ALA PHE LEU LEU LYS GLU LEU LYS GLY LYS PHE SEQRES 13 B 323 PRO ASP VAL PRO GLY PHE SER TRP VAL THR PRO CYS ILE SEQRES 14 B 323 SER ALA LYS ASP ILE VAL TYR ILE GLY LEU ARG ASP VAL SEQRES 15 B 323 ASP PRO GLY GLU HIS TYR ILE ILE LYS THR LEU GLY ILE SEQRES 16 B 323 LYS TYR PHE SER MET THR GLU VAL ASP LYS LEU GLY ILE SEQRES 17 B 323 GLY LYS VAL MET GLU GLU THR PHE SER TYR LEU LEU GLY SEQRES 18 B 323 ARG LYS LYS ARG PRO ILE HIS LEU SER PHE ASP VAL ASP SEQRES 19 B 323 GLY LEU ASP PRO VAL PHE THR PRO ALA THR GLY THR PRO SEQRES 20 B 323 VAL VAL GLY GLY LEU SER TYR ARG GLU GLY LEU TYR ILE SEQRES 21 B 323 THR GLU GLU ILE TYR LYS THR GLY LEU LEU SER GLY LEU SEQRES 22 B 323 ASP ILE MET GLU VAL ASN PRO THR LEU GLY LYS THR PRO SEQRES 23 B 323 GLU GLU VAL THR ARG THR VAL ASN THR ALA VAL ALA LEU SEQRES 24 B 323 THR LEU SER CYS PHE GLY THR LYS ARG GLU GLY ASN HIS SEQRES 25 B 323 LYS PRO GLU THR ASP TYR LEU LYS PRO PRO LYS SEQRES 1 C 323 MET SER SER LYS PRO LYS PRO ILE GLU ILE ILE GLY ALA SEQRES 2 C 323 PRO PHE SER LYS GLY GLN PRO ARG GLY GLY VAL GLU LYS SEQRES 3 C 323 GLY PRO ALA ALA LEU ARG LYS ALA GLY LEU VAL GLU LYS SEQRES 4 C 323 LEU LYS GLU THR GLU TYR ASN VAL ARG ASP HIS GLY ASP SEQRES 5 C 323 LEU ALA PHE VAL ASP VAL PRO ASN ASP SER PRO PHE GLN SEQRES 6 C 323 ILE VAL LYS ASN PRO ARG SER VAL GLY LYS ALA ASN GLU SEQRES 7 C 323 GLN LEU ALA ALA VAL VAL ALA GLU THR GLN LYS ASN GLY SEQRES 8 C 323 THR ILE SER VAL VAL LEU GLY GLY ASP HIS SER MET ALA SEQRES 9 C 323 ILE GLY SER ILE SER GLY HIS ALA ARG VAL HIS PRO ASP SEQRES 10 C 323 LEU CYS VAL ILE TRP VAL ASP ALA HIS THR ASP ILE ASN SEQRES 11 C 323 THR PRO LEU THR THR SER SER GLY ASN LEU HIS GLY GLN SEQRES 12 C 323 PRO VAL ALA PHE LEU LEU LYS GLU LEU LYS GLY LYS PHE SEQRES 13 C 323 PRO ASP VAL PRO GLY PHE SER TRP VAL THR PRO CYS ILE SEQRES 14 C 323 SER ALA LYS ASP ILE VAL TYR ILE GLY LEU ARG ASP VAL SEQRES 15 C 323 ASP PRO GLY GLU HIS TYR ILE ILE LYS THR LEU GLY ILE SEQRES 16 C 323 LYS TYR PHE SER MET THR GLU VAL ASP LYS LEU GLY ILE SEQRES 17 C 323 GLY LYS VAL MET GLU GLU THR PHE SER TYR LEU LEU GLY SEQRES 18 C 323 ARG LYS LYS ARG PRO ILE HIS LEU SER PHE ASP VAL ASP SEQRES 19 C 323 GLY LEU ASP PRO VAL PHE THR PRO ALA THR GLY THR PRO SEQRES 20 C 323 VAL VAL GLY GLY LEU SER TYR ARG GLU GLY LEU TYR ILE SEQRES 21 C 323 THR GLU GLU ILE TYR LYS THR GLY LEU LEU SER GLY LEU SEQRES 22 C 323 ASP ILE MET GLU VAL ASN PRO THR LEU GLY LYS THR PRO SEQRES 23 C 323 GLU GLU VAL THR ARG THR VAL ASN THR ALA VAL ALA LEU SEQRES 24 C 323 THR LEU SER CYS PHE GLY THR LYS ARG GLU GLY ASN HIS SEQRES 25 C 323 LYS PRO GLU THR ASP TYR LEU LYS PRO PRO LYS HET MN A 500 1 HET MN A 501 1 HET MN B 502 1 HET MN B 503 1 HET MN C 504 1 HET MN C 505 1 HET NNH A 901 12 HET NNH B 902 12 HET NNH C 903 12 HETNAM MN MANGANESE (II) ION HETNAM NNH NOR-N-OMEGA-HYDROXY-L-ARGININE FORMUL 4 MN 6(MN 2+) FORMUL 10 NNH 3(C5 H12 N4 O3) FORMUL 13 HOH *21(H2 O) HELIX 1 1 GLY A 23 GLU A 25 5 3 HELIX 2 2 LYS A 26 LYS A 33 1 8 HELIX 3 3 GLY A 35 THR A 43 1 9 HELIX 4 4 ARG A 71 ASN A 90 1 20 HELIX 5 5 ASP A 100 SER A 102 5 3 HELIX 6 6 MET A 103 HIS A 115 1 13 HELIX 7 7 ASN A 139 GLY A 142 5 4 HELIX 8 8 GLN A 143 LEU A 149 1 7 HELIX 9 9 LYS A 150 LYS A 153 5 4 HELIX 10 10 ASP A 183 LEU A 193 1 11 HELIX 11 11 MET A 200 GLY A 207 1 8 HELIX 12 12 GLY A 207 GLY A 221 1 15 HELIX 13 13 SER A 253 THR A 267 1 15 HELIX 14 14 THR A 285 PHE A 304 1 20 HELIX 15 15 GLY B 23 GLU B 25 5 3 HELIX 16 16 LYS B 26 LYS B 33 1 8 HELIX 17 17 GLY B 35 THR B 43 1 9 HELIX 18 18 ARG B 71 ASN B 90 1 20 HELIX 19 19 ASP B 100 SER B 102 5 3 HELIX 20 20 MET B 103 HIS B 115 1 13 HELIX 21 21 ASN B 139 GLY B 142 5 4 HELIX 22 22 GLN B 143 LEU B 149 1 7 HELIX 23 23 LYS B 150 LYS B 153 5 4 HELIX 24 24 ASP B 183 LEU B 193 1 11 HELIX 25 25 MET B 200 GLY B 207 1 8 HELIX 26 26 GLY B 207 GLY B 221 1 15 HELIX 27 27 SER B 253 THR B 267 1 15 HELIX 28 28 THR B 285 PHE B 304 1 20 HELIX 29 29 GLY C 23 GLU C 25 5 3 HELIX 30 30 LYS C 26 LYS C 33 1 8 HELIX 31 31 GLY C 35 THR C 43 1 9 HELIX 32 32 ARG C 71 ASN C 90 1 20 HELIX 33 33 ASP C 100 SER C 102 5 3 HELIX 34 34 MET C 103 HIS C 115 1 13 HELIX 35 35 ASN C 139 GLY C 142 5 4 HELIX 36 36 GLN C 143 LEU C 149 1 7 HELIX 37 37 LYS C 150 LYS C 153 5 4 HELIX 38 38 ASP C 183 LEU C 193 1 11 HELIX 39 39 MET C 200 GLY C 207 1 8 HELIX 40 40 GLY C 207 GLY C 221 1 15 HELIX 41 41 SER C 253 THR C 267 1 15 HELIX 42 42 THR C 285 PHE C 304 1 20 SHEET 1 A 8 ASN A 46 ASP A 52 0 SHEET 2 A 8 PRO A 7 GLY A 12 1 N ILE A 8 O ASN A 46 SHEET 3 A 8 ILE A 93 LEU A 97 1 N ILE A 93 O PRO A 7 SHEET 4 A 8 LEU A 270 MET A 276 1 O SER A 271 N SER A 94 SHEET 5 A 8 ILE A 227 ASP A 232 1 O ILE A 227 N SER A 271 SHEET 6 A 8 CYS A 119 VAL A 123 1 O CYS A 119 N HIS A 228 SHEET 7 A 8 ILE A 174 LEU A 179 1 O VAL A 175 N TRP A 122 SHEET 8 A 8 LYS A 196 SER A 199 1 O LYS A 196 N TYR A 176 SHEET 1 B 8 ASN B 46 ASP B 52 0 SHEET 2 B 8 PRO B 7 GLY B 12 1 N ILE B 8 O ASN B 46 SHEET 3 B 8 ILE B 93 LEU B 97 1 N ILE B 93 O PRO B 7 SHEET 4 B 8 LEU B 270 MET B 276 1 O SER B 271 N SER B 94 SHEET 5 B 8 ILE B 227 ASP B 232 1 O ILE B 227 N SER B 271 SHEET 6 B 8 CYS B 119 VAL B 123 1 O CYS B 119 N HIS B 228 SHEET 7 B 8 ILE B 174 LEU B 179 1 O VAL B 175 N TRP B 122 SHEET 8 B 8 LYS B 196 SER B 199 1 O LYS B 196 N TYR B 176 SHEET 1 C 8 ASN C 46 ASP C 52 0 SHEET 2 C 8 PRO C 7 GLY C 12 1 N ILE C 8 O ASN C 46 SHEET 3 C 8 ILE C 93 LEU C 97 1 N ILE C 93 O PRO C 7 SHEET 4 C 8 LEU C 270 MET C 276 1 O SER C 271 N SER C 94 SHEET 5 C 8 ILE C 227 ASP C 232 1 O ILE C 227 N SER C 271 SHEET 6 C 8 CYS C 119 VAL C 123 1 O CYS C 119 N HIS C 228 SHEET 7 C 8 ILE C 174 LEU C 179 1 O VAL C 175 N TRP C 122 SHEET 8 C 8 LYS C 196 SER C 199 1 O LYS C 196 N TYR C 176 LINK MN MN A 500 OD2 ASP A 232 1555 1555 2.66 LINK MN MN A 500 OH1 NNH A 901 1555 1555 2.48 LINK MN MN A 500 OD2 ASP A 124 1555 1555 1.96 LINK MN MN A 500 OD2 ASP A 128 1555 1555 2.04 LINK MN MN A 500 ND1 HIS A 101 1555 1555 2.24 LINK MN MN A 501 ND1 HIS A 126 1555 1555 1.74 LINK MN MN A 501 OD2 ASP A 232 1555 1555 2.42 LINK MN MN A 501 OD2 ASP A 234 1555 1555 1.80 LINK MN MN A 501 OH1 NNH A 901 1555 1555 2.59 LINK MN MN A 501 OD1 ASP A 124 1555 1555 2.32 LINK MN MN B 502 ND1 HIS B 101 1555 1555 2.24 LINK MN MN B 502 OD2 ASP B 128 1555 1555 2.04 LINK MN MN B 502 OD2 ASP B 232 1555 1555 2.66 LINK MN MN B 502 OH1 NNH B 902 1555 1555 2.48 LINK MN MN B 502 OD2 ASP B 124 1555 1555 1.97 LINK MN MN B 503 OD2 ASP B 232 1555 1555 2.42 LINK MN MN B 503 OD2 ASP B 234 1555 1555 1.80 LINK MN MN B 503 OH1 NNH B 902 1555 1555 2.59 LINK MN MN B 503 OD1 ASP B 124 1555 1555 2.32 LINK MN MN B 503 ND1 HIS B 126 1555 1555 1.74 LINK MN MN C 504 OD2 ASP C 128 1555 1555 2.04 LINK MN MN C 504 ND1 HIS C 101 1555 1555 2.24 LINK MN MN C 504 OD2 ASP C 124 1555 1555 1.96 LINK MN MN C 504 OD2 ASP C 232 1555 1555 2.66 LINK MN MN C 504 OH1 NNH C 903 1555 1555 2.48 LINK MN MN C 505 ND1 HIS C 126 1555 1555 1.74 LINK MN MN C 505 OD1 ASP C 124 1555 1555 2.32 LINK MN MN C 505 OD2 ASP C 232 1555 1555 2.42 LINK MN MN C 505 OD2 ASP C 234 1555 1555 1.80 LINK MN MN C 505 OH1 NNH C 903 1555 1555 2.59 CISPEP 1 GLY A 98 GLY A 99 0 -0.12 CISPEP 2 GLY B 98 GLY B 99 0 -0.15 CISPEP 3 GLY C 98 GLY C 99 0 -0.16 SITE 1 AC1 6 HIS A 101 ASP A 124 ASP A 128 ASP A 232 SITE 2 AC1 6 MN A 501 NNH A 901 SITE 1 AC2 6 ASP A 124 HIS A 126 ASP A 232 ASP A 234 SITE 2 AC2 6 MN A 500 NNH A 901 SITE 1 AC3 6 HIS B 101 ASP B 124 ASP B 128 ASP B 232 SITE 2 AC3 6 MN B 503 NNH B 902 SITE 1 AC4 6 ASP B 124 HIS B 126 ASP B 232 ASP B 234 SITE 2 AC4 6 MN B 502 NNH B 902 SITE 1 AC5 6 HIS C 101 ASP C 124 ASP C 128 ASP C 232 SITE 2 AC5 6 MN C 505 NNH C 903 SITE 1 AC6 6 ASP C 124 HIS C 126 ASP C 232 ASP C 234 SITE 2 AC6 6 MN C 504 NNH C 903 SITE 1 AC7 17 HIS A 126 ASP A 128 ASN A 130 THR A 135 SITE 2 AC7 17 SER A 137 ASN A 139 HIS A 141 GLY A 142 SITE 3 AC7 17 ASP A 183 GLU A 186 ASP A 232 ASP A 234 SITE 4 AC7 17 THR A 246 MN A 500 MN A 501 HOH A 606 SITE 5 AC7 17 HOH A 607 SITE 1 AC8 17 HIS B 126 ASP B 128 ASN B 130 THR B 135 SITE 2 AC8 17 SER B 137 ASN B 139 HIS B 141 GLY B 142 SITE 3 AC8 17 ASP B 183 GLU B 186 ASP B 232 ASP B 234 SITE 4 AC8 17 THR B 246 MN B 502 MN B 503 HOH B 613 SITE 5 AC8 17 HOH B 614 SITE 1 AC9 17 HIS C 126 ASP C 128 ASN C 130 THR C 135 SITE 2 AC9 17 SER C 137 ASN C 139 HIS C 141 GLY C 142 SITE 3 AC9 17 ASP C 183 GLU C 186 ASP C 232 ASP C 234 SITE 4 AC9 17 THR C 246 MN C 504 MN C 505 HOH C 620 SITE 5 AC9 17 HOH C 621 CRYST1 88.000 88.000 112.400 90.00 90.00 120.00 P 32 9 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011364 0.006561 0.000000 0.00000 SCALE2 0.000000 0.013122 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008897 0.00000 MASTER 441 0 9 42 24 0 27 6 0 0 0 75 END