HEADER NUCLEAR RECEPTOR 08-JAN-01 1HJ1 TITLE RAT OESTROGEN RECEPTOR BETA LIGAND-BINDING DOMAIN IN COMPLEX WITH PURE TITLE 2 ANTIOESTROGEN ICI164,384 COMPND MOL_ID: 1; COMPND 2 MOLECULE: OESTROGEN RECEPTOR BETA; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: LIGAND-BINDING DOMAIN; COMPND 5 SYNONYM: OESTROGEN RECEPTOR, ER-LBD; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: COMPLEXED WITH THE FULL ANTAGONIST ICI164,384 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: NORWAY RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 GENE: OESTROGEN RECEPTOR BETA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: GI724; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PLEX KEYWDS NUCLEAR RECEPTOR, TRANSCRIPTION FACTOR, OESTROGEN, ANTAGONIST EXPDTA X-RAY DIFFRACTION AUTHOR A.C.W.PIKE,A.M.BRZOZOWSKI,M.CARLQUIST REVDAT 3 24-OCT-18 1HJ1 1 SOURCE REVDAT 2 24-FEB-09 1HJ1 1 VERSN REVDAT 1 04-JAN-02 1HJ1 0 JRNL AUTH A.C.W.PIKE,A.M.BRZOZOWSKI,J.WALTON,R.E.HUBBARD,A.G.THORSELL, JRNL AUTH 2 Y.L.LI,J.A.GUSTAFSSON,M.CARLQUIST JRNL TITL STRUCTURAL INSIGHTS INTO THE MODE OF ACTION OF A PURE JRNL TITL 2 ANTIESTROGEN JRNL REF STRUCTURE V. 9 145 2001 JRNL REFN ISSN 0969-2126 JRNL PMID 11250199 JRNL DOI 10.1016/S0969-2126(01)00568-8 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH A.C.PIKE,A.M.BRZOZOWSKI,J.WALTON,R.E.HUBBARD,T.BONN, REMARK 1 AUTH 2 J.A.GUSTAFSSON,M.CARLQUIST REMARK 1 TITL STRUCTURAL ASPECTS OF AGONISM AND ANTAGONISM IN THE REMARK 1 TITL 2 OESTROGEN RECEPTOR REMARK 1 REF BIOCHEM.SOC.TRANS. V. 28 396 2001 REMARK 1 REFN ISSN 0300-5127 REMARK 1 PMID 10961927 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 11328 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.220 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 587 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1582 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 51 REMARK 3 SOLVENT ATOMS : 46 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 48.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 53.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.316 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.228 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : 0.012 ; 0.020 REMARK 3 ANGLE DISTANCE (A) : 0.035 ; 0.040 REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : 0.039 ; 0.050 REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : 0.011 ; 0.020 REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : 0.121 ; 0.150 REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : 0.182 ; 0.300 REMARK 3 MULTIPLE TORSION (A) : 0.184 ; 0.300 REMARK 3 H-BOND (X...Y) (A) : 0.148 ; 0.300 REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : 1.700 ; 7.000 REMARK 3 STAGGERED (DEGREES) : 17.700; 15.000 REMARK 3 TRANSVERSE (DEGREES) : 35.000; 20.000 REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.839 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.928 ; 3.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.075 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.301 ; 3.000 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: BULK SOLVENT CORRECTION CALCULATED IN REMARK 3 XPLOR V3.843 WAS USED THROUGHOUT REFINEMENT. TEMPERATURE FACTORS REMARK 3 OF HG OF RESIDUE PMB A1437 REFINED ANISOTROPICALLY. ISOTROPIC REMARK 3 MODEL USED FOR REMAINING ATOMS. RESIDUES AFTER LYS435 ARE NOT REMARK 3 VISIBLE IN THE ELECTRON DENSITY MAPS. PCMBS MOLECULE COVALENTLY REMARK 3 BOUND (PMB) TO CYS289 REMARK 4 REMARK 4 1HJ1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-JAN-01. REMARK 100 THE DEPOSITION ID IS D_1290005263. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-FEB-99 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 8.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9464 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12201 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06000 REMARK 200 FOR THE DATA SET : 14.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.6 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.32600 REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE, CCP4 REMARK 200 STARTING MODEL: 1QKN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 7.0% (W/V) PEG 2000 MONOMETHYL ETHER REMARK 280 0.0035M NICKEL CHLORIDE 0.035M TRIS-HCL, PH 8.5, PH 8.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X,-Y+1/2,Z REMARK 290 7555 -X+1/2,Y,-Z REMARK 290 8555 X,-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 30.19000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 53.17000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.33500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 53.17000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.19000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.33500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 30.19000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 41.33500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 53.17000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 41.33500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 30.19000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 53.17000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOMOLECULEHOMODIMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 53.17000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL A 210 REMARK 465 LYS A 211 REMARK 465 GLU A 212 REMARK 465 LEU A 213 REMARK 465 LEU A 214 REMARK 465 LEU A 215 REMARK 465 SER A 216 REMARK 465 THR A 217 REMARK 465 SER A 364 REMARK 465 MET A 365 REMARK 465 TYR A 366 REMARK 465 PRO A 367 REMARK 465 LEU A 368 REMARK 465 ALA A 369 REMARK 465 SER A 370 REMARK 465 ALA A 371 REMARK 465 ASN A 372 REMARK 465 GLN A 373 REMARK 465 GLU A 374 REMARK 465 ALA A 375 REMARK 465 GLU A 376 REMARK 465 SER A 377 REMARK 465 CYS A 436 REMARK 465 LYS A 437 REMARK 465 ASN A 438 REMARK 465 VAL A 439 REMARK 465 VAL A 440 REMARK 465 PRO A 441 REMARK 465 VAL A 442 REMARK 465 TYR A 443 REMARK 465 ASP A 444 REMARK 465 LEU A 445 REMARK 465 LEU A 446 REMARK 465 LEU A 447 REMARK 465 GLU A 448 REMARK 465 MET A 449 REMARK 465 LEU A 450 REMARK 465 ASN A 451 REMARK 465 ALA A 452 REMARK 465 HIS A 453 REMARK 465 LEU A 454 REMARK 465 THR A 455 REMARK 465 ARG A 456 REMARK 465 GLY A 457 REMARK 465 TYR A 458 REMARK 465 LYS A 459 REMARK 465 SER A 460 REMARK 465 SER A 461 REMARK 465 ILE A 462 REMARK 465 SER A 463 REMARK 465 GLY A 464 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 242 CG SD CE REMARK 470 LYS A 255 CG CD CE NZ REMARK 470 LYS A 269 CE NZ REMARK 470 GLU A 326 CG CD OE1 OE2 REMARK 470 SER A 363 OG REMARK 470 SER A 378 OG REMARK 470 ARG A 379 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 380 CG CD CE NZ REMARK 470 LYS A 435 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 239 CD - NE - CZ ANGL. DEV. = 14.2 DEGREES REMARK 500 ARG A 239 NE - CZ - NH1 ANGL. DEV. = 5.4 DEGREES REMARK 500 ARG A 239 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 GLU A 292 OE1 - CD - OE2 ANGL. DEV. = -9.8 DEGREES REMARK 500 ARG A 301 NE - CZ - NH2 ANGL. DEV. = -4.5 DEGREES REMARK 500 ARG A 341 CA - CB - CG ANGL. DEV. = 13.7 DEGREES REMARK 500 ARG A 343 CD - NE - CZ ANGL. DEV. = 17.8 DEGREES REMARK 500 ARG A 421 NH1 - CZ - NH2 ANGL. DEV. = 6.8 DEGREES REMARK 500 ARG A 421 NE - CZ - NH1 ANGL. DEV. = -5.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 PMB A1437 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 288 O REMARK 620 2 PMB A1437 C4 92.9 REMARK 620 3 ARG A 421 NH2 155.0 84.6 REMARK 620 4 CYS A 289 SG 92.9 164.6 96.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A1438 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 263 NE2 REMARK 620 2 GLU A 229 OE2 134.4 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A1439 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 305 NE2 REMARK 620 2 HIS A 305 NE2 88.6 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI A1438 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI A1439 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AOE A1436 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PMB A1437 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1QKN RELATED DB: PDB REMARK 900 RAT OESTROGEN RECEPTOR BETA LIGAND-BINDING DOMAIN IN COMPLEX WITH REMARK 900 ANTAGONIST RALOXIFENE DBREF 1HJ1 A 210 464 UNP Q62986 ESR2_RAT 255 509 SEQRES 1 A 255 VAL LYS GLU LEU LEU LEU SER THR LEU SER PRO GLU GLN SEQRES 2 A 255 LEU VAL LEU THR LEU LEU GLU ALA GLU PRO PRO ASN VAL SEQRES 3 A 255 LEU VAL SER ARG PRO SER MET PRO PHE THR GLU ALA SER SEQRES 4 A 255 MET MET MET SER LEU THR LYS LEU ALA ASP LYS GLU LEU SEQRES 5 A 255 VAL HIS MET ILE GLY TRP ALA LYS LYS ILE PRO GLY PHE SEQRES 6 A 255 VAL GLU LEU SER LEU LEU ASP GLN VAL ARG LEU LEU GLU SEQRES 7 A 255 SER CYS TRP MET GLU VAL LEU MET VAL GLY LEU MET TRP SEQRES 8 A 255 ARG SER ILE ASP HIS PRO GLY LYS LEU ILE PHE ALA PRO SEQRES 9 A 255 ASP LEU VAL LEU ASP ARG ASP GLU GLY LYS CYS VAL GLU SEQRES 10 A 255 GLY ILE LEU GLU ILE PHE ASP MET LEU LEU ALA THR THR SEQRES 11 A 255 SER ARG PHE ARG GLU LEU LYS LEU GLN HIS LYS GLU TYR SEQRES 12 A 255 LEU CYS VAL LYS ALA MET ILE LEU LEU ASN SER SER MET SEQRES 13 A 255 TYR PRO LEU ALA SER ALA ASN GLN GLU ALA GLU SER SER SEQRES 14 A 255 ARG LYS LEU THR HIS LEU LEU ASN ALA VAL THR ASP ALA SEQRES 15 A 255 LEU VAL TRP VAL ILE ALA LYS SER GLY ILE SER SER GLN SEQRES 16 A 255 GLN GLN SER VAL ARG LEU ALA ASN LEU LEU MET LEU LEU SEQRES 17 A 255 SER HIS VAL ARG HIS ILE SER ASN LYS GLY MET GLU HIS SEQRES 18 A 255 LEU LEU SER MET LYS CYS LYS ASN VAL VAL PRO VAL TYR SEQRES 19 A 255 ASP LEU LEU LEU GLU MET LEU ASN ALA HIS LEU THR ARG SEQRES 20 A 255 GLY TYR LYS SER SER ILE SER GLY HET AOE A1436 38 HET PMB A1437 11 HET NI A1438 1 HET NI A1439 1 HETNAM AOE N-BUTYL-11-[(7R,8R,9S,13S,14S,17S)-3,17-DIHYDROXY-13- HETNAM 2 AOE METHYL-7,8,9,11,12,13,14,15,16,17-DECAHYDRO-6H- HETNAM 3 AOE CYCLOPENTA[A]PHENANTHREN-7-YL]-N-METHYLUNDECANAMIDE HETNAM PMB PARA-MERCURY-BENZENESULFONIC ACID HETNAM NI NICKEL (II) ION FORMUL 2 AOE C34 H55 N O3 FORMUL 3 PMB C6 H5 HG O3 S FORMUL 4 NI 2(NI 2+) FORMUL 6 HOH *46(H2 O) HELIX 1 1 SER A 219 GLU A 231 1 13 HELIX 2 2 THR A 245 LYS A 270 1 26 HELIX 3 3 SER A 278 SER A 302 1 25 HELIX 4 4 ASP A 320 VAL A 325 5 6 HELIX 5 5 GLY A 327 LEU A 345 1 19 HELIX 6 6 GLN A 348 ASN A 362 1 15 HELIX 7 7 SER A 378 LYS A 398 1 21 HELIX 8 8 SER A 402 LYS A 435 1 34 SHEET 1 A 2 LYS A 308 ALA A 312 0 SHEET 2 A 2 LEU A 315 ASP A 318 -1 N LEU A 317 O LEU A 309 LINK HG PMB A1437 O SER A 288 1555 1555 2.99 LINK HG PMB A1437 NH2 ARG A 421 1555 1555 3.07 LINK HG PMB A1437 SG CYS A 289 1555 1555 2.34 LINK NI NI A1438 NE2 HIS A 263 1555 1555 2.13 LINK NI NI A1438 OE2 GLU A 229 1555 7556 2.67 LINK NI A NI A1439 NE2 HIS A 305 1555 7556 2.65 LINK NI A NI A1439 NE2 HIS A 305 1555 1555 2.13 SITE 1 AC1 2 GLU A 229 HIS A 263 SITE 1 AC2 1 HIS A 305 SITE 1 AC3 11 ALA A 257 GLU A 260 LEU A 261 LEU A 279 SITE 2 AC3 11 TRP A 290 LEU A 294 MET A 295 ARG A 301 SITE 3 AC3 11 PHE A 311 ILE A 331 HIS A 430 SITE 1 AC4 6 SER A 288 CYS A 289 GLU A 292 ARG A 421 SITE 2 AC4 6 HIS A 422 ASN A 425 CRYST1 60.380 82.670 106.340 90.00 90.00 90.00 I 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016562 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012096 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009404 0.00000 MASTER 373 0 4 8 2 0 7 6 0 0 0 20 END