HEADER HYDROLASE 29-NOV-00 1HF4 TITLE STRUCTURAL EFFECTS OF MONOVALENT ANIONS ON POLYMORPHIC LYSOZYME TITLE 2 CRYSTALS COMPND MOL_ID: 1; COMPND 2 MOLECULE: LYSOZYME; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: HEN (GALLUS GALLUS) EGG-WHITE LYSOZYME, MUCOPEPTIDE, N- COMPND 5 ACETYLMURAMYL HYDROLASE; COMPND 6 EC: 3.2.1.17 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GALLUS GALLUS; SOURCE 3 ORGANISM_COMMON: CHICKEN; SOURCE 4 ORGANISM_TAXID: 9031; SOURCE 5 TISSUE: EGG WHITE; SOURCE 6 CELLULAR_LOCATION: CYTOPLASM (WHITE) KEYWDS HYDROLASE, HYDROLASE (O-GLYCOSYL) EXPDTA X-RAY DIFFRACTION AUTHOR M.C.VANEY,I.BROUTIN,M.RIES-KAUTT,A.DUCRUIX REVDAT 5 06-MAR-19 1HF4 1 REMARK REVDAT 4 24-FEB-09 1HF4 1 VERSN REVDAT 3 18-JUL-03 1HF4 1 REMARK REVDAT 2 27-NOV-01 1HF4 1 JRNL REVDAT 1 07-JAN-01 1HF4 0 JRNL AUTH M.C.VANEY,I.BROUTIN,P.RETAILLEAU,A.DOUANGAMATH,S.LAFONT, JRNL AUTH 2 C.HAMIAUX,T.PRANGE,A.DUCRUIX,M.RIES-KAUTT JRNL TITL STRUCTURAL EFFECTS OF MONOVALENT ANIONS ON POLYMORPHIC JRNL TITL 2 LYSOZYME CRYSTALS JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 57 929 2001 JRNL REFN ISSN 0907-4449 JRNL PMID 11418760 JRNL DOI 10.1107/S0907444901004504 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH Z.DAUTER,M.DAUTER,K.R.RAJASHANKAR REMARK 1 TITL NOVEL APPROACH TO PHASING PROTEINS: DERIVATIZATION BY SHORT REMARK 1 TITL 2 CRYO-SOAKING WITH HALIDES REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 56 232 2000 REMARK 1 REFN ISSN 0907-4449 REMARK 1 PMID 10666615 REMARK 1 DOI 10.1107/S0907444999016352 REMARK 1 REFERENCE 2 REMARK 1 AUTH Z.DAUTER,M.DAUTER REMARK 1 TITL ANOMALOUS SIGNAL OF SOLVENT BROMIDES USED FOR PHASING OF REMARK 1 TITL 2 LYSOZYME REMARK 1 REF J.MOL.BIOL. V. 289 93 1999 REMARK 1 REFN ISSN 0022-2836 REMARK 1 PMID 10339408 REMARK 1 DOI 10.1006/JMBI.1999.2744 REMARK 1 REFERENCE 3 REMARK 1 AUTH M.A.WALSH,T.R.SCHNEIDER,L.C.SIEKER,Z.DAUTER,V.S.LAMZIN, REMARK 1 AUTH 2 K.S.WILSON REMARK 1 TITL REFINEMENT OF TRICLINIC HEN EGG-WHITE LYSOZYME AT ATOMIC REMARK 1 TITL 2 RESOLUTION REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 54 522 1998 REMARK 1 REFN ISSN 0907-4449 REMARK 1 PMID 9761848 REMARK 1 DOI 10.1107/S0907444997013656 REMARK 1 REFERENCE 4 REMARK 1 AUTH L.K.STEINRAUF REMARK 1 TITL STRUCTURES OF MONOCLINIC LYSOZYME IODIDE AT 1.6 A AND OF REMARK 1 TITL 2 TRICLINIC LYSOZYME NITRATE AT 1.1 A. REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 54 767 1998 REMARK 1 REFN ISSN 0907-4449 REMARK 1 PMID 9757091 REMARK 1 DOI 10.1107/S0907444997016922 REMARK 1 REFERENCE 5 REMARK 1 AUTH K.LIM,A.NADARAJAH,E.L.FORSYTHE,M.L.PUSEY REMARK 1 TITL LOCATIONS OF BROMIDE IONS IN TETRAGONAL LYSOZYME CRYSTALS REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 54 899 1998 REMARK 1 REFN ISSN 0907-4449 REMARK 1 PMID 9757106 REMARK 1 DOI 10.1107/S0907444998002844 REMARK 1 REFERENCE 6 REMARK 1 AUTH M.C.VANEY,S.MAIGNAN,M.RIES-KAUTT,A.DUCRUIX REMARK 1 TITL HIGH-RESOLUTION STRUCTURE (1.33 A) OF A HEW LYSOZYME REMARK 1 TITL 2 TETRAGONAL CRYSTAL GROWN IN THE APCF APPARATUS. DATA AND REMARK 1 TITL 3 STRUCTURAL COMPARISON WITH A CRYSTAL GROWN UNDER REMARK 1 TITL 4 MICROGRAVITY FROM SPACEHAB-01 MISSION. REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 52 505 1996 REMARK 1 REFN ISSN 0907-4449 REMARK 1 PMID 15299672 REMARK 1 DOI 10.1107/S090744499501674X REMARK 2 REMARK 2 RESOLUTION. 1.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.853 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 6.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 10000000.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0010 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 95.5 REMARK 3 NUMBER OF REFLECTIONS : 31225 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3499 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 8 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.45 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.52 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 87.00 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3549 REMARK 3 BIN R VALUE (WORKING SET) : 0.3400 REMARK 3 BIN FREE R VALUE : 0.3900 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 11.30 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 403 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2002 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 34 REMARK 3 SOLVENT ATOMS : 251 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 13.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.19 REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.350 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.80 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.140 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 2.500 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.730 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 3.210 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.700 ; 2.500 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : PARAM11.WAT REMARK 3 PARAMETER FILE 3 : PARAMETER.ELEMENTS REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : TOPHCSDX.PRO REMARK 3 TOPOLOGY FILE 2 : TOPH11.WAT REMARK 3 TOPOLOGY FILE 3 : TOPOLOGY.ELEMENTS REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE LOOP ARG73-ASN74 OF CHAIN B WAS REMARK 3 MODELED WITH ALTERNATE POSITIONS. IN CONTACT WITH THESE TWO REMARK 3 LOOPS CONFORMATIONS, TWO SODIUM IONS NA+ WERE REFINED WITH REMARK 3 ALTERNATE POSITIONS. ATOM OCCUPANCIES WERE REFINED FOR NA+ 350 REMARK 3 AND SOME NITRATE IONS: NO3-807 AND NO3-808, BUT NO ALTERNATE REMARK 3 POSITIONS WERE MODELLED. ALTHOUGH THERE ARE SOME BUMPS BETWEEN REMARK 3 ATOMS OF THE STRUCTURE, THESE ATOMS ARE CLEARLY DEFINED INTO THE REMARK 3 ELECTRON DENSITIES. REMARK 4 REMARK 4 1HF4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-NOV-00. REMARK 100 THE DEPOSITION ID IS D_1290005550. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JAN-96 REMARK 200 TEMPERATURE (KELVIN) : 293.0 REMARK 200 PH : 4.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : LURE REMARK 200 BEAMLINE : DW32 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AGROVATA, ROTAVATA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35206 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.450 REMARK 200 RESOLUTION RANGE LOW (A) : 10.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.5 REMARK 200 DATA REDUNDANCY : 7.700 REMARK 200 R MERGE (I) : 0.12000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 3.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.16000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: X-PLOR 3.853 REMARK 200 STARTING MODEL: 5LYM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 24.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.63 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTALS OF NITRATE-LYSOZYME WERE REMARK 280 GROWN UNDER A MICRO GRAVITY ENVIRONMENT DURING THE USML-2 REMARK 280 MISSION LAUNCHED ON OCTOBER 1995 (SHUTTLE COLUMBIA). THE REMARK 280 CRYSTALLIZATION SETUP WAS THE APCF DEVELOPPED BY EUROPEAN SPACE REMARK 280 AGENCY. PROTEIN CONCENTRATION 10 MG/ML IN 50 MM SODIUM ACETATE REMARK 280 BUFFER AT PH 4.5. GRADIENT CONCENTRATION APPLIED FROM 0 TO FINAL REMARK 280 290 MM AT 293K, PH 4.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 31.36500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL_UNIT: MONOMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 5 NE - CZ - NH2 ANGL. DEV. = 3.6 DEGREES REMARK 500 ARG B 5 NE - CZ - NH2 ANGL. DEV. = 3.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG B 128 56.76 39.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 150 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ARG A 73 O REMARK 620 2 HOH A2065 O 87.5 REMARK 620 3 SER A 60 O 113.8 158.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 150 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ARG B 73 O REMARK 620 2 HOH B2072 O 160.1 REMARK 620 3 CYS B 64 O 100.5 78.0 REMARK 620 4 SER B 60 O 113.2 86.4 82.3 REMARK 620 5 HOH B2076 O 95.2 67.8 113.0 145.2 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 150 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 150 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 803 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 B 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 B 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 B 803 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 B 804 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 B 805 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 193L RELATED DB: PDB REMARK 900 THE 1.33 A STRUCTURE OF TETRAGONAL HEN EGG WHITE LYSOZYME REMARK 900 RELATED ID: 194L RELATED DB: PDB REMARK 900 THE 1.40 A STRUCTURE OF SPACEHAB-01 HEN EGG WHITE LYSOZYME REMARK 900 RELATED ID: 1A2Y RELATED DB: PDB REMARK 900 HEN EGG WHITE LYSOZYME, D18A MUTANT, IN COMPLEX WITH MOUSE REMARK 900 MONOCLONAL ANTIBODY D1.3 REMARK 900 RELATED ID: 1AKI RELATED DB: PDB REMARK 900 THE STRUCTURE OF THE ORTHORHOMBIC FORM OF HEN EGG-WHITE LYSOZYME AT REMARK 900 1.5 ANGSTROMS RESOLUTION REMARK 900 RELATED ID: 1AT5 RELATED DB: PDB REMARK 900 HEN EGG WHITE LYSOZYME WITH A SUCCINIMIDE RESIDUE REMARK 900 RELATED ID: 1AT6 RELATED DB: PDB REMARK 900 HEN EGG WHITE LYSOZYME WITH A ISOASPARTATE RESIDUE REMARK 900 RELATED ID: 1AZF RELATED DB: PDB REMARK 900 CHICKEN EGG WHITE LYSOZYME CRYSTAL GROWN IN BROMIDE SOLUTION REMARK 900 RELATED ID: 1B0D RELATED DB: PDB REMARK 900 STRUCTURAL EFFECTS OF MONOVALENT ANIONS ON POLYMORPHIC LYSOZYME REMARK 900 CRYSTALS REMARK 900 RELATED ID: 1B2K RELATED DB: PDB REMARK 900 STRUCTURAL EFFECTS OF MONOVALENT ANIONS ON POLYMORPHIC LYSOZYME REMARK 900 CRYSTALS REMARK 900 RELATED ID: 1BGI RELATED DB: PDB REMARK 900 ORTHORHOMBIC LYSOZYME CRYSTALLIZED AT HIGH TEMPERATURE (310K) REMARK 900 RELATED ID: 1BHZ RELATED DB: PDB REMARK 900 LOW TEMPERATURE MIDDLE RESOLUTION STRUCTURE OF HEN EGG WHITE REMARK 900 LYSOZYME FROM MASC DATA REMARK 900 RELATED ID: 1BVK RELATED DB: PDB REMARK 900 HUMANIZED ANTI-LYSOZYME FV COMPLEXED WITH LYSOZYME REMARK 900 RELATED ID: 1BVX RELATED DB: PDB REMARK 900 THE 1.8 A STRUCTURE OF GEL GROWN TETRAGONAL HEN EGG WHITE LYSOZYME REMARK 900 RELATED ID: 1BWH RELATED DB: PDB REMARK 900 THE 1.8 A STRUCTURE OF GROUND CONTROL GROWN TETRAGONAL HEN EGG REMARK 900 WHITE LYSOZYME REMARK 900 RELATED ID: 1BWI RELATED DB: PDB REMARK 900 THE 1.8 A STRUCTURE OF MICROBATCH OIL DROP GROWN TETRAGONAL HEN EGG REMARK 900 WHITE LYSOZYME REMARK 900 RELATED ID: 1BWJ RELATED DB: PDB REMARK 900 THE 1.8 A STRUCTURE OF MICROGRAVITY GROWN TETRAGONAL HEN EGG WHITE REMARK 900 LYSOZYME REMARK 900 RELATED ID: 1C08 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HYHEL-10 FV-HEN LYSOZYME COMPLEX REMARK 900 RELATED ID: 1C10 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HEW LYSOZYME UNDER PRESSURE OF XENON (8 BAR) REMARK 900 RELATED ID: 1DPW RELATED DB: PDB REMARK 900 STRUCTURE OF HEN EGG-WHITE LYSOZYME IN COMPLEX WITH MPD REMARK 900 RELATED ID: 1DPX RELATED DB: PDB REMARK 900 STRUCTURE OF HEN EGG-WHITE LYSOZYME REMARK 900 RELATED ID: 1DQJ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE ANTI-LYSOZYME ANTIBODY HYHEL-63 COMPLEXED REMARK 900 WITH HEN EGG WHITE LYSOZYME REMARK 900 RELATED ID: 1E8L RELATED DB: PDB REMARK 900 NMR SOLUTION STRUCTURE OF HEN LYSOZYME REMARK 900 RELATED ID: 1F0W RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF ORTHORHOMBIC LYSOZYME GROWN AT PH 6.5 REMARK 900 RELATED ID: 1F10 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF ORTHORHOMBIC LYSOZYME GROWN AT PH 6.5 AT 88% REMARK 900 RELATIVE HUMIDITY REMARK 900 RELATED ID: 1F3J RELATED DB: PDB REMARK 900 HISTOCOMPATIBILITY ANTIGEN I-AG7 REMARK 900 RELATED ID: 1FLQ RELATED DB: PDB REMARK 900 HEN EGG WHITE LYSOZYME MUTANT WITH ALANINE SUBSTITUTED FORGLYCINE REMARK 900 RELATED ID: 1FLU RELATED DB: PDB REMARK 900 HEN EGG WHITE LYSOZYME MUTANT WITH ALANINE SUBSTITUTED FORGLYCINE REMARK 900 RELATED ID: 1FLW RELATED DB: PDB REMARK 900 HEN EGG WHITE LYSOZYME MUTANT WITH ALANINE SUBSTITUTED FORGLYCINE REMARK 900 RELATED ID: 1FLY RELATED DB: PDB REMARK 900 HEN EGG WHITE LYSOZYME MUTANT WITH ALANINE SUBSTITUTED FORGLYCINE REMARK 900 RELATED ID: 1FN5 RELATED DB: PDB REMARK 900 HEN EGG WHITE LYSOZYME MUTANT WITH ALANINE SUBSTITUTED FORGLYCINE REMARK 900 RELATED ID: 1HSW RELATED DB: PDB REMARK 900 LYSOZYME (MUCOPEPTIDE N-ACETYLMURAMYL HYDROLASE) REMARK 900 RELATED ID: 1HSX RELATED DB: PDB REMARK 900 LYSOZYME GROWN AT BASIC PH AND ITS LOW HUMIDITY VARIANT REMARK 900 RELATED ID: 1JPO RELATED DB: PDB REMARK 900 LOW TEMPERATURE ORTHORHOMBIC LYSOZYME REMARK 900 RELATED ID: 1KIP RELATED DB: PDB REMARK 900 FV MUTANT Y(B 32)A (VH DOMAIN) OF MOUSE MONOCLONAL ANTIBODY D1.3 REMARK 900 COMPLEXED WITH HEN EGG WHITE LYSOZYME REMARK 900 RELATED ID: 1KIQ RELATED DB: PDB REMARK 900 FV MUTANT Y(B 101)F (VH DOMAIN) OF MOUSE MONOCLONAL ANTIBODY D1.3 REMARK 900 COMPLEXED WITH HEN EGG WHITE LYSOZYME REMARK 900 RELATED ID: 1KIR RELATED DB: PDB REMARK 900 FV MUTANT Y(A 50)S (VL DOMAIN) OF MOUSE MONOCLONAL ANTIBODY D1.3 REMARK 900 COMPLEXED WITH HEN EGG WHITE LYSOZYME REMARK 900 RELATED ID: 1KXW RELATED DB: PDB REMARK 900 ANALYSIS OF THE STABILIZATION OF HEN LYSOZYME WITH THE HELIX DIPOLE REMARK 900 AND CHARGED SIDE CHAINS REMARK 900 RELATED ID: 1KXX RELATED DB: PDB REMARK 900 ANALYSIS OF THE STABILIZATION OF HEN LYSOZYME WITH THE HELIX DIPOLE REMARK 900 AND CHARGED SIDE CHAINS REMARK 900 RELATED ID: 1KXY RELATED DB: PDB REMARK 900 ANALYSIS OF THE STABILIZATION OF HEN LYSOZYME WITH THE HELIX DIPOLE REMARK 900 AND CHARGED SIDE CHAINS REMARK 900 RELATED ID: 1LCN RELATED DB: PDB REMARK 900 MONOCLINIC HEN EGG WHITE LYSOZYME, THIOCYANATE COMPLEX REMARK 900 RELATED ID: 1LKR RELATED DB: PDB REMARK 900 MONOCLINIC HEN EGG WHITE LYSOZYME IODIDE REMARK 900 RELATED ID: 1LKS RELATED DB: PDB REMARK 900 HEN EGG WHITE LYSOZYME NITRATE REMARK 900 RELATED ID: 1LPI RELATED DB: PDB REMARK 900 HEW LYSOZYME: TRP...NA CATION-PI INTERACTION REMARK 900 RELATED ID: 1LYO RELATED DB: PDB REMARK 900 CROSS-LINKED LYSOZYME CRYSTAL IN NEAT WATER REMARK 900 RELATED ID: 1LZ8 RELATED DB: PDB REMARK 900 LYSOZYME PHASED ON ANOMALOUS SIGNAL OF SULFURS AND CHLORINES REMARK 900 RELATED ID: 1LZN RELATED DB: PDB REMARK 900 NEUTRON STRUCTURE OF HEN EGG-WHITE LYSOZYME REMARK 900 RELATED ID: 1MEL RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF A CAMEL SINGLE-DOMAIN VH ANTIBODY FRAGMENT IN REMARK 900 COMPLEX WITH LYSOZYME REMARK 900 RELATED ID: 1QTK RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HEW LYSOZYME UNDER PRESSURE OF KRYPTON (55 BAR) REMARK 900 RELATED ID: 1RFP RELATED DB: PDB REMARK 900 ANALYSIS OF THE STABILIZATION OF HEN LYSOZYME WITH THE HELIX DIPOLE REMARK 900 AND CHARGED SIDE CHAINS REMARK 900 RELATED ID: 1UCO RELATED DB: PDB REMARK 900 HEN EGG-WHITE LYSOZYME, LOW HUMIDITY FORM REMARK 900 RELATED ID: 1UIA RELATED DB: PDB REMARK 900 ANALYSIS OF THE STABILIZATION OF HEN LYSOZYME WITH THE HELIX DIPOLE REMARK 900 AND CHARGED SIDE CHAINS REMARK 900 RELATED ID: 1UIB RELATED DB: PDB REMARK 900 ANALYSIS OF THE STABILIZATION OF HEN LYSOZYME WITH THE HELIX DIPOLE REMARK 900 AND CHARGED SIDE CHAINS REMARK 900 RELATED ID: 1UIC RELATED DB: PDB REMARK 900 ANALYSIS OF THE STABILIZATION OF HEN LYSOZYME WITH THE HELIX DIPOLE REMARK 900 AND CHARGED SIDE CHAINS REMARK 900 RELATED ID: 1UID RELATED DB: PDB REMARK 900 ANALYSIS OF THE STABILIZATION OF HEN LYSOZYME WITH THE HELIX DIPOLE REMARK 900 AND CHARGED SIDE CHAINS REMARK 900 RELATED ID: 1UIE RELATED DB: PDB REMARK 900 ANALYSIS OF THE STABILIZATION OF HEN LYSOZYME WITH THE HELIX DIPOLE REMARK 900 AND CHARGED SIDE CHAINS REMARK 900 RELATED ID: 1UIF RELATED DB: PDB REMARK 900 ANALYSIS OF THE STABILIZATION OF HEN LYSOZYME WITH THE HELIX DIPOLE REMARK 900 AND CHARGED SIDE CHAINS REMARK 900 RELATED ID: 1UIG RELATED DB: PDB REMARK 900 ANALYSIS OF THE STABILIZATION OF HEN LYSOZYME WITH THE HELIX DIPOLE REMARK 900 AND CHARGED SIDE CHAINS REMARK 900 RELATED ID: 1UIH RELATED DB: PDB REMARK 900 ANALYSIS OF THE STABILIZATION OF HEN LYSOZYME WITH THE HELIX DIPOLE REMARK 900 AND CHARGED SIDE CHAINS REMARK 900 RELATED ID: 1XEI RELATED DB: PDB REMARK 900 THE CRYSTAL STRUCTURES OF LYSOZYME AT VERY LOW LEVELS OF HYDRATION REMARK 900 RELATED ID: 1XEJ RELATED DB: PDB REMARK 900 THE CRYSTAL STRUCTURES OF LYSOZYME AT VERY LOW LEVELS OF HYDRATION REMARK 900 RELATED ID: 1XEK RELATED DB: PDB REMARK 900 THE CRYSTAL STRUCTURES OF LYSOZYME AT VERY LOW LEVELS OF HYDRATION REMARK 900 RELATED ID: 2LYO RELATED DB: PDB REMARK 900 CROSS-LINKED CHICKEN LYSOZYME CRYSTAL IN 90% ACETONITRILE-WATER REMARK 900 RELATED ID: 3LYO RELATED DB: PDB REMARK 900 CROSS-LINKED CHICKEN LYSOZYME CRYSTAL IN 95% ACETONITRILE-WATER REMARK 900 RELATED ID: 3LZT RELATED DB: PDB REMARK 900 REFINEMENT OF TRICLINIC LYSOZYME AT ATOMIC RESOLUTION REMARK 900 RELATED ID: 4LYO RELATED DB: PDB REMARK 900 CROSS-LINKED CHICKEN LYSOZYME CRYSTAL IN NEAT ACETONITRILE, THEN REMARK 900 BACK-SOAKED IN WATER REMARK 900 RELATED ID: 4LZT RELATED DB: PDB REMARK 900 ATOMIC RESOLUTION REFINEMENT OF TRICLINIC HEW LYSOZYME AT 295K DBREF 1HF4 A 1 129 UNP P00698 LYC_CHICK 19 147 DBREF 1HF4 B 1 129 UNP P00698 LYC_CHICK 19 147 SEQRES 1 A 129 LYS VAL PHE GLY ARG CYS GLU LEU ALA ALA ALA MET LYS SEQRES 2 A 129 ARG HIS GLY LEU ASP ASN TYR ARG GLY TYR SER LEU GLY SEQRES 3 A 129 ASN TRP VAL CYS ALA ALA LYS PHE GLU SER ASN PHE ASN SEQRES 4 A 129 THR GLN ALA THR ASN ARG ASN THR ASP GLY SER THR ASP SEQRES 5 A 129 TYR GLY ILE LEU GLN ILE ASN SER ARG TRP TRP CYS ASN SEQRES 6 A 129 ASP GLY ARG THR PRO GLY SER ARG ASN LEU CYS ASN ILE SEQRES 7 A 129 PRO CYS SER ALA LEU LEU SER SER ASP ILE THR ALA SER SEQRES 8 A 129 VAL ASN CYS ALA LYS LYS ILE VAL SER ASP GLY ASN GLY SEQRES 9 A 129 MET ASN ALA TRP VAL ALA TRP ARG ASN ARG CYS LYS GLY SEQRES 10 A 129 THR ASP VAL GLN ALA TRP ILE ARG GLY CYS ARG LEU SEQRES 1 B 129 LYS VAL PHE GLY ARG CYS GLU LEU ALA ALA ALA MET LYS SEQRES 2 B 129 ARG HIS GLY LEU ASP ASN TYR ARG GLY TYR SER LEU GLY SEQRES 3 B 129 ASN TRP VAL CYS ALA ALA LYS PHE GLU SER ASN PHE ASN SEQRES 4 B 129 THR GLN ALA THR ASN ARG ASN THR ASP GLY SER THR ASP SEQRES 5 B 129 TYR GLY ILE LEU GLN ILE ASN SER ARG TRP TRP CYS ASN SEQRES 6 B 129 ASP GLY ARG THR PRO GLY SER ARG ASN LEU CYS ASN ILE SEQRES 7 B 129 PRO CYS SER ALA LEU LEU SER SER ASP ILE THR ALA SER SEQRES 8 B 129 VAL ASN CYS ALA LYS LYS ILE VAL SER ASP GLY ASN GLY SEQRES 9 B 129 MET ASN ALA TRP VAL ALA TRP ARG ASN ARG CYS LYS GLY SEQRES 10 B 129 THR ASP VAL GLN ALA TRP ILE ARG GLY CYS ARG LEU HET NA A 150 1 HET NO3 A 801 4 HET NO3 A 802 4 HET NO3 A 803 4 HET NA B 150 2 HET NO3 B 801 4 HET NO3 B 802 4 HET NO3 B 803 4 HET NO3 B 804 4 HET NO3 B 805 4 HETNAM NA SODIUM ION HETNAM NO3 NITRATE ION FORMUL 3 NA 2(NA 1+) FORMUL 4 NO3 8(N O3 1-) FORMUL 13 HOH *251(H2 O) HELIX 1 1 GLY A 4 HIS A 15 1 12 HELIX 2 2 SER A 24 ASN A 37 1 14 HELIX 3 3 CYS A 80 SER A 85 5 6 HELIX 4 4 ILE A 88 SER A 100 1 13 HELIX 5 5 ASN A 103 ALA A 107 5 5 HELIX 6 6 TRP A 108 CYS A 115 1 8 HELIX 7 7 ASP A 119 ARG A 125 5 7 HELIX 8 8 GLY B 4 HIS B 15 1 12 HELIX 9 9 SER B 24 ASN B 37 1 14 HELIX 10 10 CYS B 80 SER B 85 5 6 HELIX 11 11 ILE B 88 VAL B 99 1 12 HELIX 12 12 ASN B 103 ALA B 107 5 5 HELIX 13 13 TRP B 108 CYS B 115 1 8 HELIX 14 14 ASP B 119 ARG B 125 5 7 SHEET 1 AA 3 THR A 43 ARG A 45 0 SHEET 2 AA 3 THR A 51 TYR A 53 -1 O ASP A 52 N ASN A 44 SHEET 3 AA 3 ILE A 58 ASN A 59 -1 O ILE A 58 N TYR A 53 SHEET 1 BA 3 THR B 43 ARG B 45 0 SHEET 2 BA 3 THR B 51 TYR B 53 -1 O ASP B 52 N ASN B 44 SHEET 3 BA 3 ILE B 58 ASN B 59 -1 O ILE B 58 N TYR B 53 SSBOND 1 CYS A 6 CYS A 127 1555 1555 2.04 SSBOND 2 CYS A 30 CYS A 115 1555 1555 2.03 SSBOND 3 CYS A 64 CYS A 80 1555 1555 2.03 SSBOND 4 CYS A 76 CYS A 94 1555 1555 2.03 SSBOND 5 CYS B 6 CYS B 127 1555 1555 2.03 SSBOND 6 CYS B 30 CYS B 115 1555 1555 2.03 SSBOND 7 CYS B 64 CYS B 80 1555 1555 2.02 SSBOND 8 CYS B 76 CYS B 94 1555 1555 2.02 LINK NA A NA A 150 O ARG A 73 1555 1555 2.38 LINK NA A NA A 150 O HOH A2065 1555 1555 2.28 LINK NA A NA A 150 O SER A 60 1555 1555 2.37 LINK NA A NA B 150 O AARG B 73 1555 1555 2.20 LINK NA A NA B 150 O HOH B2072 1555 1555 2.55 LINK NA A NA B 150 O CYS B 64 1555 1555 2.43 LINK NA A NA B 150 O SER B 60 1555 1555 2.22 LINK NA A NA B 150 O HOH B2076 1555 1555 2.51 SITE 1 AC1 6 SER A 60 CYS A 64 SER A 72 ARG A 73 SITE 2 AC1 6 HOH A2058 HOH A2065 SITE 1 AC2 7 SER B 60 CYS B 64 ARG B 73 ASN B 74 SITE 2 AC2 7 HOH B2069 HOH B2072 HOH B2076 SITE 1 AC3 9 ASN A 65 ASN A 74 ASN A 77 ILE A 78 SITE 2 AC3 9 PRO A 79 HOH A2119 ARG B 112 LYS B 116 SITE 3 AC3 9 HOH B2109 SITE 1 AC4 5 LYS A 1 GLN A 41 SER A 86 HOH A2120 SITE 2 AC4 5 HOH A2121 SITE 1 AC5 7 PHE A 3 ALA A 11 ARG A 14 HIS A 15 SITE 2 AC5 7 SER A 86 ASP A 87 ILE A 88 SITE 1 AC6 7 ARG A 112 LYS A 116 ASN B 65 ASN B 74 SITE 2 AC6 7 ASN B 77 ILE B 78 PRO B 79 SITE 1 AC7 3 GLY B 126 HOH B2126 HOH B2127 SITE 1 AC8 8 ARG A 21 GLY A 22 ASN B 65 ASP B 66 SITE 2 AC8 8 PRO B 79 CYS B 80 SER B 81 HOH B2128 SITE 1 AC9 10 PHE B 3 ALA B 11 ARG B 14 HIS B 15 SITE 2 AC9 10 SER B 86 ASP B 87 ILE B 88 THR B 89 SITE 3 AC9 10 HOH B2084 HOH B2129 SITE 1 BC1 5 ARG B 45 ASN B 46 THR B 47 GLY B 49 SITE 2 BC1 5 HOH B2130 CRYST1 27.940 62.730 60.250 90.00 90.76 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.035791 0.000000 0.000475 0.00000 SCALE2 0.000000 0.015941 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016599 0.00000 MASTER 532 0 10 14 6 0 21 6 0 0 0 20 END