HEADER HYDROLASE 08-AUG-02 1H2F TITLE BACILLUS STEAROTHERMOPHILUS PHOE (PREVIOUSLY KNOWN AS YHFR) TITLE 2 IN COMPLEX WITH TRIVANADATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHATASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: YHFR; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS STEAROTHERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 1422; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PS3297 KEYWDS HYDROLASE, BROAD SPECIFICITY PHOSPHATASE; DPGM HOMOLOG EXPDTA X-RAY DIFFRACTION AUTHOR D.J.RIGDEN,J.E.LITTLEJOHN,M.J.JEDRZEJAS REVDAT 3 24-FEB-09 1H2F 1 VERSN REVDAT 2 17-MAR-05 1H2F 1 JRNL REVDAT 1 12-AUG-02 1H2F 0 JRNL AUTH D.J.RIGDEN,J.E.LITTLEJOHN,K.HENDERSON,M.J.JEDRZEJAS JRNL TITL STRUCTURES OF PHOSPHATE AND TRIVANADATE COMPLEXES JRNL TITL 2 OF BACILLUS STEAROTHERMOPHILUS PHOSPHATASE PHOE: JRNL TITL 3 STRUCTURAL AND FUNCTIONAL ANALYSIS IN THE JRNL TITL 4 COFACTOR-DEPENDENT PHOSPHOGLYCERATE MUTASE JRNL TITL 5 SUPERFAMILY JRNL REF J.MOL.BIOL. V. 325 411 2003 JRNL REFN ISSN 0022-2836 JRNL PMID 12498792 JRNL DOI 10.1016/S0022-2836(02)01229-9 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH D.J.RIGDEN,L.V.MELLO,P.SETLOW,M.J.JEDRZEJAS REMARK 1 TITL STRUCTURE AND MECHANISM OF ACTION OF A REMARK 1 TITL 2 COFACTOR-DEPENDENT PHOSPHOGLYCERATE MUTASE HOMOLOG REMARK 1 TITL 3 FROM BACILLUS STEAROTHERMOPHILUS WITH BROAD REMARK 1 TITL 4 SPECIFICITY PHOSPHATASE ACTIVITY REMARK 1 REF J.MOL.BIOL. V. 315 1129 2002 REMARK 1 REFN ISSN 0022-2836 REMARK 1 PMID 11827481 REMARK 1 DOI 10.1006/JMBI.2001.5290 REMARK 1 REFERENCE 2 REMARK 1 AUTH D.J.RIGDEN,I.BAGYAN,E.LAMANI,P.SETLOW,M.J.JEDRZEJAS REMARK 1 TITL A COFACTOR-DEPENDENT PHOSPHOGLYCERATE MUTASE REMARK 1 TITL 2 HOMOLOG FROM BACILLUS STEAROTHERMOPHILUS IS REMARK 1 TITL 3 ACTUALLY A BROAD SPECIFICITY PHOSPHATASE REMARK 1 REF PROTEIN SCI. V. 10 1835 2001 REMARK 1 REFN ISSN 0961-8368 REMARK 1 PMID 11514674 REMARK 1 DOI 10.1110/PS.15701 REMARK 2 REMARK 2 RESOLUTION. 2.0 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.0 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1636651.82 REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 95.2 REMARK 3 NUMBER OF REFLECTIONS : 17334 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.8 REMARK 3 FREE R VALUE TEST SET COUNT : 835 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.008 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.07 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 86.6 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1470 REMARK 3 BIN R VALUE (WORKING SET) : 0.350 REMARK 3 BIN FREE R VALUE : 0.369 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.9 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 76 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.042 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1755 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 16 REMARK 3 SOLVENT ATOMS : 142 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 29.6 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.7 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 7.49 REMARK 3 B22 (A**2) : 5.28 REMARK 3 B33 (A**2) : -12.77 REMARK 3 B12 (A**2) : 0 REMARK 3 B13 (A**2) : 0 REMARK 3 B23 (A**2) : 0 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.26 REMARK 3 ESD FROM SIGMAA (A) : 0.33 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.31 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.38 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.2 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.7 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.69 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 2.71 ; 1.50 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 3.41 ; 2.00 REMARK 3 SIDE-CHAIN BOND (A**2) : 4.02 ; 2.00 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 4.90 ; 2.50 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.307577 REMARK 3 BSOL : 45.1339 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : PO4_XPLOR_PAR.TXT REMARK 3 PARAMETER FILE 4 : NEWVO3_PAR.TXT REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : PO4_XPLOR_TOP.TXT REMARK 3 TOPOLOGY FILE 4 : VO3_TOP_PATCH.TXT REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: CRYSTAL WAS EXPOSED TO 50MM AMMONIUM REMARK 3 VANADATE, 30% ETHYLENE GLYCOL, 20MM SODIUM ACETATE PH 5.0 FOR REMARK 3 3 DAYS BEFORE DATA COLLECTION. REMARK 4 REMARK 4 1H2F COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-AUG-02. REMARK 100 THE PDBE ID CODE IS EBI-11216. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-MAR-02 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 4.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17334 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.2 REMARK 200 DATA REDUNDANCY : 4.900 REMARK 200 R MERGE (I) : 0.15500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.2 REMARK 200 DATA REDUNDANCY IN SHELL : 2.10 REMARK 200 R MERGE FOR SHELL (I) : 0.55400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: OTHER REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.3 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15 % ETHYLENE GLYCOL, REMARK 280 85 MM SODIUM CACODYLATE PH 4.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 81.79300 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 27.87900 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 27.87900 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 40.89650 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 27.87900 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 27.87900 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 122.68950 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 27.87900 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 27.87900 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 40.89650 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 27.87900 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 27.87900 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 122.68950 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 81.79300 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 GENERATING THE BIOMOLECULE REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 THE SWISSPROT ENTRY Q9ALU0 IDENTIFIES THIS PROTEIN REMARK 400 AS A PHOSPHOGLYCERATE MUTASE. THE PROTEIN STUDIED REMARK 400 IS A HOMOLOG OF PHOSPHOGLYCERATE MUTASE BUT HAS NO REMARK 400 MUTASE ACTIVITY. THE MOLECULE DOES SHOW PHOSPHATASE REMARK 400 ACTIVITY (SEE REFERENCE 2 IN REMARK 1). REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 164 - O HOH A 2115 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 150 -147.82 -139.93 REMARK 500 TRP A 171 35.71 -81.41 REMARK 500 GLU A 203 -82.56 -59.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 VA3 A1209 V1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VA3 A1209 O0 REMARK 620 2 HIS A 10 NE2 111.7 REMARK 620 3 VA3 A1209 V2 91.7 130.8 REMARK 620 4 VA3 A1209 O3 114.0 104.9 27.7 REMARK 620 5 VA3 A1209 O9 112.8 100.7 109.4 111.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 VA3 A1209 V2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VA3 A1209 V1 REMARK 620 2 VA3 A1209 O2 130.8 REMARK 620 3 VA3 A1209 O3 27.3 104.5 REMARK 620 4 VA3 A1209 O4 102.1 109.4 110.7 REMARK 620 5 VA3 A1209 O6 96.6 105.7 115.2 110.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 VA3 A1209 V3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VA3 A1209 O6 REMARK 620 2 GLU A 83 OE2 139.9 REMARK 620 3 VA3 A1209 O7 104.9 83.0 REMARK 620 4 VA3 A1209 O8 109.9 104.4 108.1 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A1210 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE VA3 A1209 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1EBB RELATED DB: PDB REMARK 900 BACILLUS STEAROTHERMOPHILUS YHFR REMARK 900 RELATED ID: 1H2E RELATED DB: PDB REMARK 900 BACILLUS STEAROTHERMOPHILUS PHOE (PREVIOUSLY REMARK 900 KNOWN AS YHFR) IN COMPLEX WITH PHOSPHATE REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE SWISSPROT ENTRY Q9ALU0 IDENTIFIES THIS PROTEIN REMARK 999 AS A PHOSPHOGLYCERATE MUTASE. THE PROTEIN STUDIED REMARK 999 IS A HOMOLOG OF PHOSPHOGLYCERATE MUTASE BUT HAS NO REMARK 999 MUTASE ACTIVITY. THE MOLECULE DOES SHOW PHOSPHATASE REMARK 999 ACTIVITY (SEE REFERENCE 2 IN REMARK 1). DBREF 1H2F A 2 7 PDB 1H2F 1H2F 2 7 DBREF 1H2F A 8 202 UNP Q9ALU0 Q9ALU0 1 195 DBREF 1H2F A 203 208 PDB 1H2F 1H2F 203 208 SEQRES 1 A 207 ALA THR THR LEU TYR LEU THR ARG HIS GLY GLU THR LYS SEQRES 2 A 207 TRP ASN VAL GLU ARG ARG MET GLN GLY TRP GLN ASP SER SEQRES 3 A 207 PRO LEU THR GLU LYS GLY ARG GLN ASP ALA MET ARG LEU SEQRES 4 A 207 GLY LYS ARG LEU GLU ALA VAL GLU LEU ALA ALA ILE TYR SEQRES 5 A 207 THR SER THR SER GLY ARG ALA LEU GLU THR ALA GLU ILE SEQRES 6 A 207 VAL ARG GLY GLY ARG LEU ILE PRO ILE TYR GLN ASP GLU SEQRES 7 A 207 ARG LEU ARG GLU ILE HIS LEU GLY ASP TRP GLU GLY LYS SEQRES 8 A 207 THR HIS ASP GLU ILE ARG GLN MET ASP PRO ILE ALA PHE SEQRES 9 A 207 ASP HIS PHE TRP GLN ALA PRO HIS LEU TYR ALA PRO GLN SEQRES 10 A 207 ARG GLY GLU ARG PHE CYS ASP VAL GLN GLN ARG ALA LEU SEQRES 11 A 207 GLU ALA VAL GLN SER ILE VAL ASP ARG HIS GLU GLY GLU SEQRES 12 A 207 THR VAL LEU ILE VAL THR HIS GLY VAL VAL LEU LYS THR SEQRES 13 A 207 LEU MET ALA ALA PHE LYS ASP THR PRO LEU ASP HIS LEU SEQRES 14 A 207 TRP SER PRO PRO TYR MET TYR GLY THR SER VAL THR ILE SEQRES 15 A 207 ILE GLU VAL ASP GLY GLY THR PHE HIS VAL ALA VAL GLU SEQRES 16 A 207 GLY ASP VAL SER HIS ILE GLU GLU VAL LYS GLU VAL HET PO4 A1210 5 HET VA3 A1209 11 HETNAM PO4 PHOSPHATE ION HETNAM VA3 TRIVANADATE FORMUL 2 PO4 O4 P 3- FORMUL 3 VA3 O8 V3 FORMUL 4 HOH *142(H2 O1) HELIX 1 1 THR A 13 GLU A 18 1 6 HELIX 2 2 THR A 30 LEU A 44 1 15 HELIX 3 3 SER A 57 GLY A 69 1 13 HELIX 4 4 GLU A 79 ARG A 82 5 4 HELIX 5 5 LEU A 86 GLU A 90 5 5 HELIX 6 6 THR A 93 ASP A 101 1 9 HELIX 7 7 ASP A 101 ALA A 111 1 11 HELIX 8 8 PRO A 112 TYR A 115 5 4 HELIX 9 9 ARG A 122 HIS A 141 1 20 HELIX 10 10 HIS A 151 LYS A 163 1 13 HELIX 11 11 PRO A 166 LEU A 170 5 5 SHEET 1 AA 6 ILE A 75 GLN A 77 0 SHEET 2 AA 6 ALA A 51 THR A 54 1 O ILE A 52 N TYR A 76 SHEET 3 AA 6 THR A 145 THR A 150 1 O LEU A 147 N TYR A 53 SHEET 4 AA 6 THR A 3 ARG A 9 1 O THR A 4 N VAL A 146 SHEET 5 AA 6 VAL A 181 ASP A 187 -1 O THR A 182 N LEU A 7 SHEET 6 AA 6 THR A 190 ASP A 198 -1 O THR A 190 N ASP A 187 LINK NE2 HIS A 10 V1 VA3 A1209 1555 1555 1.77 LINK OE2 GLU A 83 V3 VA3 A1209 1555 1555 1.81 CISPEP 1 PRO A 173 PRO A 174 0 1.31 SITE 1 AC1 7 ALA A 2 THR A 3 THR A 4 GLY A 143 SITE 2 AC1 7 GLU A 144 THR A 145 HOH A2142 SITE 1 AC2 13 ARG A 9 HIS A 10 ASN A 16 GLN A 22 SITE 2 AC2 13 ARG A 59 GLU A 83 HIS A 151 GLY A 152 SITE 3 AC2 13 VAL A 153 VAL A 208 HOH A2014 HOH A2139 SITE 4 AC2 13 HOH A2141 CRYST1 55.758 55.758 163.586 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017935 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017935 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006113 0.00000 MASTER 359 0 2 11 6 0 6 6 0 0 0 16 END