HEADER COLLAGEN 12-DEC-01 1GR3 TITLE STRUCTURE OF THE HUMAN COLLAGEN X NC1 TRIMER COMPND MOL_ID: 1; COMPND 2 MOLECULE: COLLAGEN X; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: NC1 DOMAIN, RESIDUES 521-680; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P89BLUESCRIPT KEYWDS COLLAGEN, EXTRACELLULAR MATRIX, CONNECTIVE TISSUE EXPDTA X-RAY DIFFRACTION AUTHOR O.BOGIN,M.KVANSAKUL,E.ROM,J.SINGER,A.YAYON,E.HOHENESTER REVDAT 3 05-JUL-17 1GR3 1 REMARK REVDAT 2 24-FEB-09 1GR3 1 VERSN REVDAT 1 14-FEB-02 1GR3 0 JRNL AUTH O.BOGIN,M.KVANSAKUL,E.ROM,J.SINGER,A.YAYON,E.HOHENESTER JRNL TITL INSIGHT INTO SCHMID METAPHYSEAL CHONDRODYSPLASIA FROM THE JRNL TITL 2 CRYSTAL STRUCTURE OF THE COLLAGEN X NC1 DOMAIN TRIMER. JRNL REF STRUCTURE V. 10 165 2002 JRNL REFN ISSN 0969-2126 JRNL PMID 11839302 JRNL DOI 10.1016/S0969-2126(02)00697-4 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH D.S.MARKS,C.A.GREGORY,G.A.WALLIS,A.BRASS,K.E.KADLER, REMARK 1 AUTH 2 R.P.BOOT-HANDFORD REMARK 1 TITL METAPHYSEAL CHONDRODYSPLASIA TYPE SCHMID MUTATIONS ARE REMARK 1 TITL 2 PREDICTED TO OCCUR IN TWO DISTINCT THREE-DIMENSIONAL REMARK 1 TITL 3 CLUSTERS WITHIN TYPE X COLLAGEN NC1 DOMAINS THAT RETAIN THE REMARK 1 TITL 4 ABILITY TO TRIMERIZE REMARK 1 REF J.BIOL.CHEM. V. 274 3632 1999 REMARK 1 REFN ISSN 0021-9258 REMARK 1 PMID 9920912 REMARK 1 DOI 10.1074/JBC.274.6.3632 REMARK 1 REFERENCE 2 REMARK 1 AUTH D.CHAN,O.JACENKO REMARK 1 TITL PHENOTYPIC AND BIOCHEMICAL CONSEQUENCES OF COLLAGEN X REMARK 1 TITL 2 MUTATIONS IN MICE AND HUMANS REMARK 1 REF MATRIX BIOL. V. 17 169 1998 REMARK 1 REFN ISSN 0945-053X REMARK 1 PMID 9707340 REMARK 1 DOI 10.1016/S0945-053X(98)90056-7 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 10000.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 11533 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.199 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1193 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 23 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.03 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 445 REMARK 3 BIN R VALUE (WORKING SET) : 0.2350 REMARK 3 BIN FREE R VALUE : 0.2220 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 51 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1057 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 29 REMARK 3 SOLVENT ATOMS : 40 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : INDIVIDUAL RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.300 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.100 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.900 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.800 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT REMARK 3 KSOL : 0.33 REMARK 3 BSOL : 75.00 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : CNS_TOPPAR:PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : CNS_TOPPAR:WATER.PARAM REMARK 3 PARAMETER FILE 3 : CNS_TOPPAR:ION.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : CNS_TOPPAR:PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : CNS_TOPPAR:WATER.TOP REMARK 3 TOPOLOGY FILE 3 : CNS_TOPPAR:ION.TOP REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1GR3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-DEC-01. REMARK 100 THE DEPOSITION ID IS D_1290009052. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 293.0 REMARK 200 PH : 6.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RUH3R REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : OSMIC MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11537 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 4.700 REMARK 200 R MERGE (I) : 0.07600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.70 REMARK 200 R MERGE FOR SHELL (I) : 0.38500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 1C28 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.6 M MGSO4, 0.1 M MES PH 6.5, PH 6.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 39.18000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 22.62058 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 47.01200 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 39.18000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 22.62058 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 47.01200 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 39.18000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 22.62058 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 47.01200 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 39.18000 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 22.62058 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 47.01200 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 39.18000 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 22.62058 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 47.01200 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 39.18000 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 22.62058 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 47.01200 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 45.24117 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 94.02400 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 45.24117 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 94.02400 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 45.24117 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 94.02400 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 45.24117 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 94.02400 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 45.24117 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 94.02400 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 45.24117 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 94.02400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 117.54000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 67.86175 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 135.72350 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CA CA A 901 LIES ON A SPECIAL POSITION. REMARK 375 NA NA A 902 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2012 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2026 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2028 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2029 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2031 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2040 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 521 REMARK 465 PRO A 522 REMARK 465 GLU A 523 REMARK 465 GLY A 524 REMARK 465 PHE A 525 REMARK 465 ILE A 526 REMARK 465 LYS A 527 REMARK 465 ALA A 528 REMARK 465 GLY A 529 REMARK 465 GLN A 530 REMARK 465 ARG A 531 REMARK 465 PRO A 532 REMARK 465 SER A 533 REMARK 465 LEU A 534 REMARK 465 SER A 535 REMARK 465 GLY A 536 REMARK 465 THR A 537 REMARK 465 PRO A 538 REMARK 465 LEU A 539 REMARK 465 VAL A 540 REMARK 465 SER A 541 REMARK 465 ALA A 542 REMARK 465 ASN A 543 REMARK 465 GLN A 544 REMARK 465 GLY A 545 REMARK 465 VAL A 546 REMARK 465 THR A 547 REMARK 465 GLY A 548 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 MET A 549 CG SD CE REMARK 480 LYS A 573 CD CE NZ REMARK 480 ARG A 578 CG CD NE CZ NH1 NH2 REMARK 480 GLU A 658 OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 577 43.27 -170.17 REMARK 500 LYS A 630 122.30 -38.17 REMARK 500 ASN A 647 -2.67 77.76 REMARK 500 SER A 659 66.94 -116.23 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 CPS A 800 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 901 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 634 OD2 REMARK 620 2 HOH A2024 O 73.1 REMARK 620 3 ASP A 634 OD1 49.0 122.1 REMARK 620 4 ASP A 634 OD1 127.6 147.4 84.1 REMARK 620 5 ASP A 634 OD2 116.2 152.5 70.7 48.6 REMARK 620 6 HOH A2024 O 77.7 85.3 79.7 121.0 72.5 REMARK 620 7 ASP A 634 OD1 71.2 80.0 84.5 84.1 127.3 148.2 REMARK 620 8 ASP A 634 OD2 116.6 77.5 127.6 70.6 115.6 152.6 48.9 REMARK 620 9 HOH A2024 O 153.0 85.1 147.1 79.2 77.0 84.9 121.3 72.5 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 902 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 635 O REMARK 620 2 GLN A 635 O 104.8 REMARK 620 3 HOH A2021 O 83.9 160.1 REMARK 620 4 HOH A2021 O 160.4 88.9 78.9 REMARK 620 5 GLN A 635 O 105.3 105.1 89.4 84.0 REMARK 620 6 HOH A2021 O 88.9 83.5 78.7 78.6 160.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 903 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 634 OD1 REMARK 620 2 ASP A 626 OD1 94.4 REMARK 620 3 HOH A2024 O 73.8 167.7 REMARK 620 4 LEU A 633 O 90.4 79.1 97.1 REMARK 620 5 ASP A 634 OD2 78.0 112.7 69.0 163.8 REMARK 620 6 GLU A 627 O 167.5 96.3 95.8 97.9 91.9 REMARK 620 N 1 2 3 4 5 REMARK 700 REMARK 700 SHEET REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, REMARK 700 TWO SHEETS ARE DEFINED. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 903 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CPS A 800 REMARK 999 REMARK 999 SEQUENCE REMARK 999 N-TERMINAL FUSED 6-HIS TAG DBREF 1GR3 A 521 680 UNP Q03692 CA1A_HUMAN 521 680 SEQRES 1 A 160 MET PRO GLU GLY PHE ILE LYS ALA GLY GLN ARG PRO SER SEQRES 2 A 160 LEU SER GLY THR PRO LEU VAL SER ALA ASN GLN GLY VAL SEQRES 3 A 160 THR GLY MET PRO VAL SER ALA PHE THR VAL ILE LEU SER SEQRES 4 A 160 LYS ALA TYR PRO ALA ILE GLY THR PRO ILE PRO PHE ASP SEQRES 5 A 160 LYS ILE LEU TYR ASN ARG GLN GLN HIS TYR ASP PRO ARG SEQRES 6 A 160 THR GLY ILE PHE THR CYS GLN ILE PRO GLY ILE TYR TYR SEQRES 7 A 160 PHE SER TYR HIS VAL HIS VAL LYS GLY THR HIS VAL TRP SEQRES 8 A 160 VAL GLY LEU TYR LYS ASN GLY THR PRO VAL MET TYR THR SEQRES 9 A 160 TYR ASP GLU TYR THR LYS GLY TYR LEU ASP GLN ALA SER SEQRES 10 A 160 GLY SER ALA ILE ILE ASP LEU THR GLU ASN ASP GLN VAL SEQRES 11 A 160 TRP LEU GLN LEU PRO ASN ALA GLU SER ASN GLY LEU TYR SEQRES 12 A 160 SER SER GLU TYR VAL HIS SER SER PHE SER GLY PHE LEU SEQRES 13 A 160 VAL ALA PRO MET HET CPS A 800 26 HET CA A 901 1 HET NA A 902 1 HET CA A 903 1 HETNAM CPS 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1- HETNAM 2 CPS PROPANESULFONATE HETNAM CA CALCIUM ION HETNAM NA SODIUM ION HETSYN CPS CHAPS FORMUL 2 CPS C32 H58 N2 O7 S FORMUL 3 CA 2(CA 2+) FORMUL 4 NA NA 1+ FORMUL 6 HOH *40(H2 O) SHEET 1 AA 5 LYS A 573 TYR A 576 0 SHEET 2 AA 5 ALA A 553 ILE A 557 -1 O THR A 555 N LEU A 575 SHEET 3 AA 5 SER A 671 PRO A 679 -1 O PHE A 672 N VAL A 556 SHEET 4 AA 5 GLY A 595 LYS A 616 -1 O ILE A 596 N VAL A 677 SHEET 5 AA 5 ASP A 634 LEU A 644 -1 O ASP A 634 N VAL A 605 SHEET 1 AB 5 LYS A 573 TYR A 576 0 SHEET 2 AB 5 ALA A 553 ILE A 557 -1 O THR A 555 N LEU A 575 SHEET 3 AB 5 SER A 671 PRO A 679 -1 O PHE A 672 N VAL A 556 SHEET 4 AB 5 GLY A 595 LYS A 616 -1 O ILE A 596 N VAL A 677 SHEET 5 AB 5 ASN A 660 TYR A 663 -1 O GLY A 661 N LYS A 606 LINK CA CA A 901 OD2 ASP A 634 1555 1555 2.66 LINK CA CA A 901 O HOH A2024 1555 1555 2.56 LINK CA CA A 901 OD1 ASP A 634 1555 1555 2.59 LINK CA CA A 901 OD1 ASP A 634 1555 2765 2.61 LINK CA CA A 901 OD2 ASP A 634 1555 2765 2.68 LINK CA CA A 901 O HOH A2024 1555 2765 2.57 LINK CA CA A 901 OD1 ASP A 634 1555 3675 2.59 LINK CA CA A 901 OD2 ASP A 634 1555 3675 2.67 LINK CA CA A 901 O HOH A2024 1555 3675 2.58 LINK NA NA A 902 O GLN A 635 1555 2765 2.40 LINK NA NA A 902 O GLN A 635 1555 3675 2.41 LINK NA NA A 902 O HOH A2021 1555 2765 2.55 LINK NA NA A 902 O HOH A2021 1555 1555 2.55 LINK NA NA A 902 O GLN A 635 1555 1555 2.39 LINK NA NA A 902 O HOH A2021 1555 3675 2.56 LINK CA CA A 903 OD1 ASP A 634 1555 3675 2.45 LINK CA CA A 903 OD1 ASP A 626 1555 1555 2.38 LINK CA CA A 903 O HOH A2024 1555 1555 3.01 LINK CA CA A 903 O LEU A 633 1555 3675 2.48 LINK CA CA A 903 OD2 ASP A 634 1555 1555 2.41 LINK CA CA A 903 O GLU A 627 1555 1555 2.32 SITE 1 AC1 2 ASP A 634 HOH A2024 SITE 1 AC2 3 GLN A 635 HOH A2021 HOH A2029 SITE 1 AC3 5 ASP A 626 GLU A 627 LEU A 633 ASP A 634 SITE 2 AC3 5 HOH A2024 SITE 1 AC4 6 TRP A 611 LYS A 616 VAL A 621 TYR A 625 SITE 2 AC4 6 SER A 659 TYR A 667 CRYST1 78.360 78.360 141.036 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012762 0.007368 0.000000 0.00000 SCALE2 0.000000 0.014736 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007090 0.00000 MASTER 451 0 4 0 10 0 6 6 0 0 0 13 END