HEADER VIRAL PROTEIN 11-MAY-99 1GP8 TITLE NMR SOLUTION STRUCTURE OF THE COAT PROTEIN-BINDING DOMAIN TITLE 2 OF BACTERIOPHAGE P22 SCAFFOLDING PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN (SCAFFOLDING PROTEIN); COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: C-TERMINAL FUNCTIONAL DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE P22; SOURCE 3 ORGANISM_TAXID: 10754; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: NF1829; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET3A KEYWDS SCAFFOLDING PROTEIN, COAT PROTEIN-BINDING DOMAIN, HELIX- KEYWDS 2 LOOP-HELIX MOTIF, VIRAL PROTEIN EXPDTA SOLUTION NMR NUMMDL 35 AUTHOR Y.SUN,M.H.PARKER,P.WEIGELE,S.CASJENS,P.E.PREVELIGE JR., AUTHOR 2 N.R.KRISHNA REVDAT 4 24-FEB-09 1GP8 1 VERSN REVDAT 3 06-JAN-04 1GP8 3 ATOM REVDAT 2 24-APR-00 1GP8 1 JRNL HEADER REVDAT 1 17-MAY-99 1GP8 0 JRNL AUTH Y.SUN,M.H.PARKER,P.WEIGELE,S.CASJENS, JRNL AUTH 2 P.E.PREVELIGE JR.,N.R.KRISHNA JRNL TITL STRUCTURE OF THE COAT PROTEIN-BINDING DOMAIN OF JRNL TITL 2 THE SCAFFOLDING PROTEIN FROM A DOUBLE-STRANDED DNA JRNL TITL 3 VIRUS. JRNL REF J.MOL.BIOL. V. 297 1195 2000 JRNL REFN ISSN 0022-2836 JRNL PMID 10764583 JRNL DOI 10.1006/JMBI.2000.3620 REMARK 1 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.851 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REFINEMENT DETAILS CAN BE FOUND IN REMARK 3 THE JRNL CITATION ABOVE. THE REFINEMENT WAS CARRIED OUT ON THE REMARK 3 C-TERMINAL 40-RESIDUE SEGMENT. REMARK 4 REMARK 4 1GP8 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-MAY-99. REMARK 100 THE RCSB ID CODE IS RCSB001043. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 4.4 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 10% WATER/90% D2O, 99.9% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NOESY, TOCSY, COSY, 15N REMARK 210 EDITED 3D NOESY-HSQC, TOCSYHMQC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AM600, AVANCE600, INOVA600 REMARK 210 SPECTROMETER MANUFACTURER : BRUKER, VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : X-PLOR REMARK 210 METHOD USED : DISTANCE GEOMETRY AND REMARK 210 SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 35 REMARK 210 CONFORMERS, SELECTION CRITERIA : LEAST RESTRAINT VIOLATION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: EXPERIMENTS WERE DONE ON THE C-TERMINAL 67-RESIDUE REMARK 210 (238-303 PLUS ALANINE AT THE N-TERNINUS) SCAFFOLDING PROTEIN. REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASN A 272 -71.08 -43.44 REMARK 500 1 ALA A 284 -76.11 -77.47 REMARK 500 1 SER A 285 43.45 -85.49 REMARK 500 1 LYS A 298 -70.46 -44.92 REMARK 500 1 LYS A 300 37.10 -89.62 REMARK 500 2 ASP A 267 -69.70 -101.43 REMARK 500 2 VAL A 268 -160.15 -72.03 REMARK 500 2 SER A 269 -33.66 -39.03 REMARK 500 2 ALA A 282 -77.21 -61.76 REMARK 500 2 ALA A 284 -77.53 -65.48 REMARK 500 2 SER A 285 41.26 -85.89 REMARK 500 2 ASP A 288 48.92 -89.45 REMARK 500 3 THR A 265 163.48 -48.18 REMARK 500 3 VAL A 268 -172.96 -68.78 REMARK 500 3 LYS A 273 -70.31 -41.98 REMARK 500 3 ALA A 275 -77.85 -42.00 REMARK 500 3 ALA A 284 -66.69 -103.69 REMARK 500 3 SER A 285 46.14 -85.19 REMARK 500 3 LYS A 286 -34.49 -138.33 REMARK 500 3 LYS A 300 46.07 -85.35 REMARK 500 4 ASP A 267 59.24 -66.14 REMARK 500 4 VAL A 268 -166.02 -78.09 REMARK 500 4 SER A 269 -39.46 -39.85 REMARK 500 4 ALA A 275 -73.63 -43.54 REMARK 500 4 ALA A 284 -75.70 -72.25 REMARK 500 4 SER A 285 43.68 -85.60 REMARK 500 4 GLU A 290 -70.33 -44.27 REMARK 500 5 ASP A 267 -176.29 -69.98 REMARK 500 5 VAL A 268 -163.72 -77.59 REMARK 500 5 ALA A 275 -70.74 -42.21 REMARK 500 5 LYS A 278 -72.64 -43.55 REMARK 500 5 ALA A 284 -70.15 -79.89 REMARK 500 5 SER A 285 45.01 -85.32 REMARK 500 5 LYS A 286 -31.17 -134.57 REMARK 500 5 LYS A 294 -72.40 -43.04 REMARK 500 6 VAL A 268 171.91 -45.45 REMARK 500 6 ASN A 272 -70.71 -61.37 REMARK 500 6 ALA A 284 -71.38 -73.91 REMARK 500 6 SER A 285 42.52 -85.35 REMARK 500 7 LYS A 273 -72.41 -42.87 REMARK 500 7 ALA A 284 -68.69 -90.50 REMARK 500 7 SER A 285 44.22 -83.14 REMARK 500 7 LYS A 286 -30.69 -134.81 REMARK 500 7 LYS A 294 -72.85 -43.24 REMARK 500 8 VAL A 268 -166.64 -56.20 REMARK 500 8 LYS A 273 -72.91 -42.44 REMARK 500 8 ALA A 275 -84.84 -42.63 REMARK 500 8 LYS A 278 -74.46 -46.94 REMARK 500 8 ALA A 282 -73.10 -54.33 REMARK 500 8 ALA A 284 -81.70 -68.80 REMARK 500 8 SER A 285 43.58 -85.39 REMARK 500 8 GLU A 290 -71.91 -43.92 REMARK 500 9 VAL A 268 -167.49 -76.55 REMARK 500 9 LYS A 273 -73.26 -44.16 REMARK 500 9 ALA A 284 -64.89 -94.63 REMARK 500 9 SER A 285 45.52 -84.93 REMARK 500 9 LYS A 286 -35.59 -138.58 REMARK 500 9 LYS A 294 -72.46 -44.96 REMARK 500 10 ASP A 267 153.99 -42.45 REMARK 500 10 ALA A 282 -73.41 -55.88 REMARK 500 10 ALA A 284 -80.17 -65.81 REMARK 500 10 SER A 285 40.50 -85.26 REMARK 500 10 GLU A 290 -71.41 -42.50 REMARK 500 10 ARG A 293 -70.03 -42.55 REMARK 500 11 THR A 265 -157.63 -66.90 REMARK 500 11 ASP A 267 89.92 -59.02 REMARK 500 11 VAL A 268 -176.84 -64.67 REMARK 500 11 LYS A 273 -70.03 -42.05 REMARK 500 11 ALA A 284 -70.00 -80.28 REMARK 500 11 SER A 285 42.98 -85.09 REMARK 500 12 ASP A 267 83.75 -59.24 REMARK 500 12 VAL A 268 174.34 -47.09 REMARK 500 12 ALA A 284 -76.37 -78.41 REMARK 500 12 SER A 285 42.08 -84.86 REMARK 500 13 VAL A 268 -167.15 -76.99 REMARK 500 13 ALA A 284 -70.73 -70.17 REMARK 500 13 SER A 285 44.24 -85.63 REMARK 500 14 ASP A 267 59.80 -66.67 REMARK 500 14 VAL A 268 -168.01 -66.44 REMARK 500 14 ALA A 284 -70.36 -93.05 REMARK 500 14 SER A 285 45.85 -85.59 REMARK 500 14 LYS A 286 -32.77 -136.38 REMARK 500 14 GLU A 290 -70.39 -48.83 REMARK 500 14 LYS A 300 44.74 -82.17 REMARK 500 15 VAL A 268 -163.22 -56.14 REMARK 500 15 ILE A 276 -75.78 -48.28 REMARK 500 15 ALA A 284 -75.15 -70.49 REMARK 500 15 SER A 285 42.15 -84.18 REMARK 500 16 VAL A 268 171.80 -48.80 REMARK 500 16 SER A 285 42.35 -85.82 REMARK 500 16 LYS A 300 44.62 -83.58 REMARK 500 17 THR A 265 167.39 -49.66 REMARK 500 17 ASP A 267 97.88 -57.19 REMARK 500 17 ARG A 277 -39.69 -39.74 REMARK 500 17 SER A 285 45.51 -85.58 REMARK 500 17 LYS A 286 -32.06 -133.03 REMARK 500 17 LYS A 294 -70.07 -42.19 REMARK 500 18 VAL A 268 -167.12 -55.20 REMARK 500 18 ALA A 275 -70.69 -42.84 REMARK 500 18 LYS A 278 -70.95 -42.13 REMARK 500 18 ALA A 282 -71.52 -52.31 REMARK 500 18 ALA A 284 -77.07 -77.59 REMARK 500 18 SER A 285 44.19 -85.10 REMARK 500 18 LYS A 300 45.10 -83.74 REMARK 500 19 ASP A 267 47.94 -81.21 REMARK 500 19 VAL A 268 -169.50 -73.04 REMARK 500 19 ALA A 284 -64.40 -95.70 REMARK 500 19 SER A 285 46.12 -85.37 REMARK 500 19 LYS A 286 -34.42 -138.49 REMARK 500 20 VAL A 268 -162.94 -56.10 REMARK 500 20 ALA A 275 -79.66 -45.18 REMARK 500 20 SER A 285 46.40 -85.26 REMARK 500 20 LYS A 286 -32.98 -136.66 REMARK 500 21 VAL A 268 -168.10 -100.13 REMARK 500 21 ALA A 282 -70.28 -55.57 REMARK 500 21 ALA A 284 -80.17 -75.88 REMARK 500 21 SER A 285 45.15 -85.26 REMARK 500 21 ARG A 293 -70.05 -41.99 REMARK 500 22 ALA A 282 -72.43 -56.86 REMARK 500 22 ALA A 284 -77.68 -58.91 REMARK 500 22 SER A 285 42.21 -85.34 REMARK 500 23 ASP A 267 106.37 -58.28 REMARK 500 23 LYS A 278 -70.28 -43.09 REMARK 500 23 ALA A 282 -70.45 -60.09 REMARK 500 23 ALA A 284 -82.26 -75.50 REMARK 500 23 SER A 285 44.40 -85.67 REMARK 500 23 ARG A 293 -71.26 -42.83 REMARK 500 24 THR A 265 33.98 -98.38 REMARK 500 24 ALA A 275 -74.35 -44.43 REMARK 500 24 SER A 285 45.85 -83.37 REMARK 500 24 LYS A 286 -44.34 -143.97 REMARK 500 24 LYS A 294 -70.29 -42.67 REMARK 500 24 LYS A 300 -28.54 -39.22 REMARK 500 25 THR A 265 53.80 -102.23 REMARK 500 25 VAL A 268 -170.41 -56.03 REMARK 500 25 LYS A 273 -71.18 -42.52 REMARK 500 25 ASP A 281 -72.20 -62.01 REMARK 500 25 ALA A 284 -67.84 -95.59 REMARK 500 25 SER A 285 45.85 -85.12 REMARK 500 25 LYS A 286 -33.64 -136.36 REMARK 500 26 LYS A 273 -71.94 -42.94 REMARK 500 26 LYS A 278 -70.38 -43.16 REMARK 500 26 ALA A 284 -74.29 -85.05 REMARK 500 26 SER A 285 45.03 -84.65 REMARK 500 26 LYS A 286 -32.03 -134.29 REMARK 500 26 ILE A 302 -77.99 -68.10 REMARK 500 27 VAL A 268 -168.63 -53.77 REMARK 500 27 ASN A 272 -71.31 -51.80 REMARK 500 27 SER A 285 44.10 -85.53 REMARK 500 27 ARG A 293 -70.85 -42.96 REMARK 500 28 ILE A 276 -74.94 -51.62 REMARK 500 28 ARG A 277 -33.60 -39.83 REMARK 500 28 ALA A 284 -71.70 -64.63 REMARK 500 28 SER A 285 42.99 -85.38 REMARK 500 28 LYS A 300 39.88 -86.28 REMARK 500 29 LYS A 273 -71.16 -42.58 REMARK 500 29 ALA A 275 -71.08 -46.53 REMARK 500 29 ALA A 282 -70.75 -52.03 REMARK 500 29 ALA A 284 -77.40 -77.12 REMARK 500 29 SER A 285 44.19 -85.22 REMARK 500 29 ARG A 293 -70.63 -42.43 REMARK 500 30 VAL A 268 -165.72 -64.31 REMARK 500 30 ASN A 272 -77.45 -53.68 REMARK 500 30 ALA A 284 -76.53 -51.71 REMARK 500 30 SER A 285 41.01 -85.46 REMARK 500 30 LYS A 294 -71.31 -47.02 REMARK 500 30 LYS A 300 48.31 -96.69 REMARK 500 31 VAL A 268 -166.23 -64.64 REMARK 500 31 ASN A 272 -70.17 -55.63 REMARK 500 31 ASP A 274 -70.71 -45.15 REMARK 500 31 ALA A 284 -76.63 -64.46 REMARK 500 31 SER A 285 43.05 -85.39 REMARK 500 32 VAL A 268 174.45 -47.05 REMARK 500 32 SER A 269 -32.06 -39.87 REMARK 500 32 LYS A 273 -72.16 -43.19 REMARK 500 32 ASP A 274 -72.70 -47.08 REMARK 500 32 ALA A 284 -79.16 -77.69 REMARK 500 32 SER A 285 42.95 -85.88 REMARK 500 33 ASP A 267 -65.87 -100.64 REMARK 500 33 VAL A 268 -166.84 -67.82 REMARK 500 33 ASN A 272 -70.74 -57.22 REMARK 500 33 ALA A 284 -77.50 -77.88 REMARK 500 33 SER A 285 44.03 -85.01 REMARK 500 34 VAL A 268 -161.99 -72.53 REMARK 500 34 SER A 269 -34.39 -36.66 REMARK 500 34 SER A 285 46.15 -85.12 REMARK 500 34 LYS A 286 -30.83 -135.31 REMARK 500 35 SER A 269 -39.09 -38.78 REMARK 500 35 LYS A 273 -70.06 -42.20 REMARK 500 35 ALA A 275 -70.30 -42.03 REMARK 500 35 ALA A 284 -72.30 -85.55 REMARK 500 35 SER A 285 42.44 -83.96 REMARK 500 35 GLU A 290 -70.26 -44.76 REMARK 500 REMARK 500 REMARK: NULL DBREF 1GP8 A 264 303 UNP P26748 VG08_BPP22 264 303 SEQRES 1 A 40 ILE THR GLY ASP VAL SER ALA ALA ASN LYS ASP ALA ILE SEQRES 2 A 40 ARG LYS GLN MET ASP ALA ALA ALA SER LYS GLY ASP VAL SEQRES 3 A 40 GLU THR TYR ARG LYS LEU LYS ALA LYS LEU LYS GLY ILE SEQRES 4 A 40 ARG HELIX 1 1 VAL A 268 SER A 285 1 18 HELIX 2 2 ASP A 288 LYS A 300 1 13 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL MASTER 260 0 0 2 0 0 0 6 0 0 0 4 END