HEADER TRANSFERASE 22-NOV-00 1G95 TITLE CRYSTAL STRUCTURE OF S.PNEUMONIAE GLMU, APO FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: N-ACETYLGLUCOSAMINE-1-PHOSPHATE URIDYLTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: GLMU, UDP-N-ACETYLGLUCOSAMINE PYROPHOSPHORYLASE; COMPND 5 EC: 2.7.7.23; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PNEUMONIAE; SOURCE 3 ORGANISM_TAXID: 1313; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GLMU, ACETYLTRANSFERASE, URIDYLTRANSFERASE PYROPHOSPHORYLASE, LEFT- KEYWDS 2 HANDED BETA-SHEET HELIX, TRIMER, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR D.KOSTREWA,A.D'ARCY,M.KAMBER REVDAT 4 13-JUL-11 1G95 1 VERSN REVDAT 3 24-FEB-09 1G95 1 VERSN REVDAT 2 01-APR-03 1G95 1 JRNL REVDAT 1 22-MAY-01 1G95 0 JRNL AUTH D.KOSTREWA,A.D'ARCY,B.TAKACS,M.KAMBER JRNL TITL CRYSTAL STRUCTURES OF STREPTOCOCCUS PNEUMONIAE JRNL TITL 2 N-ACETYLGLUCOSAMINE-1-PHOSPHATE URIDYLTRANSFERASE, GLMU, IN JRNL TITL 3 APO FORM AT 2.33 A RESOLUTION AND IN COMPLEX WITH JRNL TITL 4 UDP-N-ACETYLGLUCOSAMINE AND MG(2+) AT 1.96 A RESOLUTION. JRNL REF J.MOL.BIOL. V. 305 279 2001 JRNL REFN ISSN 0022-2836 JRNL PMID 11124906 JRNL DOI 10.1006/JMBI.2000.4296 REMARK 2 REMARK 2 RESOLUTION. 2.33 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.33 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 97.0 REMARK 3 NUMBER OF REFLECTIONS : 20576 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE-R REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.228 REMARK 3 FREE R VALUE : 0.303 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1039 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.33 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.41 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.00 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1889 REMARK 3 BIN R VALUE (WORKING SET) : 0.3060 REMARK 3 BIN FREE R VALUE : 0.3500 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 118 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3358 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 276 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 37.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 49.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -8.36400 REMARK 3 B22 (A**2) : -8.36400 REMARK 3 B33 (A**2) : 16.72800 REMARK 3 B12 (A**2) : -1.04800 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.36 REMARK 3 ESD FROM SIGMAA (A) : 0.20 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.45 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.31 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.20 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 25.90 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.10 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : ISOTROPIC REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 2.500 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 3.800 ; 3.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 5.800 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 7.300 ; 6.000 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : BULK SOLVENT MASK REMARK 3 KSOL : 0.26 REMARK 3 BSOL : 23.50 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN.PARAM REMARK 3 PARAMETER FILE 2 : ROCHE.PARAM REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : ROCHE.TOP REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 BULK SOLVENT CORRECTION WITH ELECTRON DENSITY = 0.26 E/A**3, B- REMARK 3 FACTOR = 23.5 A**2. REMARK 3 THE FOLLOWING AMINO ACID RESIDUES WERE NOT VISIBLE IN THE REMARK 3 ELECTRON DENSITY MAPS: 188-193, 453-459. REMARK 3 THE ELECTRON DENSITY MAPS OF THE FOLLOWING AMINO ACID REMARK 3 RESIDUES WERE OF RELATIVELY POOR QUALITY: 2, 10-12, 51-94, REMARK 3 145-149, 154-164, 179-187, 194-197, 439-441, 447-452. REMARK 3 THE WATER MOLECULES ARE REMARK 3 ORDERED WITH ASCENDING B-FACTORS. REMARK 4 REMARK 4 1G95 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-DEC-00. REMARK 100 THE RCSB ID CODE IS RCSB012388. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-APR-98 REMARK 200 TEMPERATURE (KELVIN) : 120 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM1A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.873 REMARK 200 MONOCHROMATOR : SAGITALLY FOCUSED SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20586 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.330 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 200 DATA REDUNDANCY : 1.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06100 REMARK 200 FOR THE DATA SET : 10.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.33 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.41 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.7 REMARK 200 DATA REDUNDANCY IN SHELL : 1.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.18800 REMARK 200 FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SIRAS REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS/TRIS, 0.2 M AMMONIUM REMARK 280 SULFATE, 25 % PEG 3350, PH 6.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 47.45500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 27.39816 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 93.31333 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 47.45500 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 27.39816 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 93.31333 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 47.45500 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 27.39816 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 93.31333 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 47.45500 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 27.39816 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 93.31333 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 47.45500 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 27.39816 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 93.31333 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 47.45500 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 27.39816 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 93.31333 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 54.79631 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 186.62667 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 54.79631 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 186.62667 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 54.79631 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 186.62667 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 54.79631 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 186.62667 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 54.79631 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 186.62667 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 54.79631 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 186.62667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A TRIMER GENERATED REMARK 300 FROM THE MONOMER IN THE ASYMMETRIC UNIT BY THE OPERATIONS: REMARK 300 -Y+1, X-Y, Z REMARK 300 AND REMARK 300 -X+Y+1, -X+1, Z REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 11130 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 52210 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -52.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 94.91000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 47.45500 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 82.19447 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASN A 188 REMARK 465 THR A 189 REMARK 465 ASN A 190 REMARK 465 ASN A 191 REMARK 465 ALA A 192 REMARK 465 GLN A 193 REMARK 465 PRO A 453 REMARK 465 HIS A 454 REMARK 465 HIS A 455 REMARK 465 PRO A 456 REMARK 465 LYS A 457 REMARK 465 ASN A 458 REMARK 465 GLN A 459 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 104 C - N - CA ANGL. DEV. = 9.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 9 64.34 -153.84 REMARK 500 GLN A 44 70.69 34.43 REMARK 500 SER A 73 -76.16 -50.58 REMARK 500 ALA A 125 115.65 -161.61 REMARK 500 ARG A 143 -161.18 -120.68 REMARK 500 GLN A 155 49.75 -80.09 REMARK 500 LYS A 156 -22.90 -140.48 REMARK 500 GLU A 289 -0.77 67.41 REMARK 500 ASN A 311 58.05 37.50 REMARK 500 GLU A 316 64.54 28.52 REMARK 500 ALA A 320 -173.82 -66.32 REMARK 500 GLN A 340 18.60 59.58 REMARK 500 LEU A 363 62.70 24.19 REMARK 500 LYS A 389 -59.56 -167.12 REMARK 500 ASN A 417 18.44 59.96 REMARK 500 ARG A 439 -160.32 -124.03 REMARK 500 GLU A 447 18.53 47.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 542 DISTANCE = 5.96 ANGSTROMS REMARK 525 HOH A 646 DISTANCE = 6.16 ANGSTROMS REMARK 525 HOH A 659 DISTANCE = 6.13 ANGSTROMS REMARK 525 HOH A 699 DISTANCE = 6.94 ANGSTROMS REMARK 525 HOH A 711 DISTANCE = 5.31 ANGSTROMS REMARK 525 HOH A 722 DISTANCE = 5.10 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1G97 RELATED DB: PDB REMARK 900 1G97 CONTAINS THE SAME PROTEIN WITH THE BOUND PRODUCT UDP-N REMARK 900 -ACETYLGLUCOSAMINE AND MG2+ DBREF 1G95 A 1 459 UNP Q97R46 Q97R46_STRPN 1 459 SEQRES 1 A 459 MET SER ASN PHE ALA ILE ILE LEU ALA ALA GLY LYS GLY SEQRES 2 A 459 THR ARG MET LYS SER ASP LEU PRO LYS VAL LEU HIS LYS SEQRES 3 A 459 VAL ALA GLY ILE SER MET LEU GLU HIS VAL PHE ARG SER SEQRES 4 A 459 VAL GLY ALA ILE GLN PRO GLU LYS THR VAL THR VAL VAL SEQRES 5 A 459 GLY HIS LYS ALA GLU LEU VAL GLU GLU VAL LEU ALA GLY SEQRES 6 A 459 GLN THR GLU PHE VAL THR GLN SER GLU GLN LEU GLY THR SEQRES 7 A 459 GLY HIS ALA VAL MET MET THR GLU PRO ILE LEU GLU GLY SEQRES 8 A 459 LEU SER GLY HIS THR LEU VAL ILE ALA GLY ASP THR PRO SEQRES 9 A 459 LEU ILE THR GLY GLU SER LEU LYS ASN LEU ILE ASP PHE SEQRES 10 A 459 HIS ILE ASN HIS LYS ASN VAL ALA THR ILE LEU THR ALA SEQRES 11 A 459 GLU THR ASP ASN PRO PHE GLY TYR GLY ARG ILE VAL ARG SEQRES 12 A 459 ASN ASP ASN ALA GLU VAL LEU ARG ILE VAL GLU GLN LYS SEQRES 13 A 459 ASP ALA THR ASP PHE GLU LYS GLN ILE LYS GLU ILE ASN SEQRES 14 A 459 THR GLY THR TYR VAL PHE ASP ASN GLU ARG LEU PHE GLU SEQRES 15 A 459 ALA LEU LYS ASN ILE ASN THR ASN ASN ALA GLN GLY GLU SEQRES 16 A 459 TYR TYR ILE THR ASP VAL ILE GLY ILE PHE ARG GLU THR SEQRES 17 A 459 GLY GLU LYS VAL GLY ALA TYR THR LEU LYS ASP PHE ASP SEQRES 18 A 459 GLU SER LEU GLY VAL ASN ASP ARG VAL ALA LEU ALA THR SEQRES 19 A 459 ALA GLU SER VAL MET ARG ARG ARG ILE ASN HIS LYS HIS SEQRES 20 A 459 MET VAL ASN GLY VAL SER PHE VAL ASN PRO GLU ALA THR SEQRES 21 A 459 TYR ILE ASP ILE ASP VAL GLU ILE ALA SER GLU VAL GLN SEQRES 22 A 459 ILE GLU ALA ASN VAL THR LEU LYS GLY GLN THR LYS ILE SEQRES 23 A 459 GLY ALA GLU THR VAL LEU THR ASN GLY THR TYR VAL VAL SEQRES 24 A 459 ASP SER THR ILE GLY ALA GLY ALA VAL ILE THR ASN SER SEQRES 25 A 459 MET ILE GLU GLU SER SER VAL ALA ASP GLY VAL ILE VAL SEQRES 26 A 459 GLY PRO TYR ALA HIS ILE ARG PRO ASN SER SER LEU GLY SEQRES 27 A 459 ALA GLN VAL HIS ILE GLY ASN PHE VAL GLU VAL LYS GLY SEQRES 28 A 459 SER SER ILE GLY GLU ASN THR LYS ALA GLY HIS LEU THR SEQRES 29 A 459 TYR ILE GLY ASN CYS GLU VAL GLY SER ASN VAL ASN PHE SEQRES 30 A 459 GLY ALA GLY THR ILE THR VAL ASN TYR ASP GLY LYS ASN SEQRES 31 A 459 LYS TYR LYS THR VAL ILE GLY ASN ASN VAL PHE VAL GLY SEQRES 32 A 459 SER ASN SER THR ILE ILE ALA PRO VAL GLU LEU GLY ASP SEQRES 33 A 459 ASN SER LEU VAL GLY ALA GLY SER THR ILE THR LYS ASP SEQRES 34 A 459 VAL PRO ALA ASP ALA ILE ALA ILE GLY ARG GLY ARG GLN SEQRES 35 A 459 ILE ASN LYS ASP GLU TYR ALA THR ARG LEU PRO HIS HIS SEQRES 36 A 459 PRO LYS ASN GLN FORMUL 2 HOH *276(H2 O) HELIX 1 1 GLY A 13 LYS A 17 5 5 HELIX 2 2 PRO A 21 LEU A 24 5 4 HELIX 3 3 MET A 32 GLY A 41 1 10 HELIX 4 4 ALA A 42 GLN A 44 5 3 HELIX 5 5 LYS A 55 LEU A 63 1 9 HELIX 6 6 LEU A 76 MET A 84 1 9 HELIX 7 7 THR A 85 GLU A 90 1 6 HELIX 8 8 THR A 107 HIS A 121 1 15 HELIX 9 9 PHE A 161 ILE A 165 5 5 HELIX 10 10 ASN A 177 LEU A 184 1 8 HELIX 11 11 THR A 199 THR A 208 1 10 HELIX 12 12 ASP A 219 LEU A 224 5 6 HELIX 13 13 ASP A 228 ASN A 250 1 23 HELIX 14 14 ASN A 256 THR A 260 5 5 HELIX 15 15 TYR A 448 LEU A 452 5 5 SHEET 1 A 7 GLU A 68 THR A 71 0 SHEET 2 A 7 LYS A 47 VAL A 52 1 O THR A 48 N GLU A 68 SHEET 3 A 7 ASN A 3 ALA A 9 1 O ASN A 3 N LYS A 47 SHEET 4 A 7 HIS A 95 ALA A 100 1 O HIS A 95 N PHE A 4 SHEET 5 A 7 GLU A 167 ASP A 176 -1 O TYR A 173 N VAL A 98 SHEET 6 A 7 ALA A 125 GLU A 131 -1 N THR A 126 O VAL A 174 SHEET 7 A 7 VAL A 212 LEU A 217 1 O GLY A 213 N ILE A 127 SHEET 1 B 2 LYS A 26 VAL A 27 0 SHEET 2 B 2 ILE A 30 SER A 31 -1 O ILE A 30 N VAL A 27 SHEET 1 C 2 ARG A 140 VAL A 142 0 SHEET 2 C 2 ARG A 151 VAL A 153 -1 O ARG A 151 N VAL A 142 SHEET 1 D11 ILE A 435 ALA A 436 0 SHEET 2 D11 LEU A 419 VAL A 420 1 O LEU A 419 N ALA A 436 SHEET 3 D11 PHE A 401 VAL A 402 1 O PHE A 401 N VAL A 420 SHEET 4 D11 ASN A 376 PHE A 377 1 O ASN A 376 N VAL A 402 SHEET 5 D11 LYS A 359 GLY A 367 1 O LYS A 359 N PHE A 377 SHEET 6 D11 HIS A 342 LYS A 350 1 O HIS A 342 N ALA A 360 SHEET 7 D11 ILE A 324 VAL A 325 1 O ILE A 324 N ILE A 343 SHEET 8 D11 VAL A 308 ILE A 309 1 O VAL A 308 N VAL A 325 SHEET 9 D11 VAL A 291 LEU A 292 1 O VAL A 291 N ILE A 309 SHEET 10 D11 GLN A 273 ILE A 274 1 O GLN A 273 N LEU A 292 SHEET 11 D11 SER A 253 PHE A 254 1 O SER A 253 N ILE A 274 SHEET 1 E11 ILE A 435 ALA A 436 0 SHEET 2 E11 LEU A 419 VAL A 420 1 O LEU A 419 N ALA A 436 SHEET 3 E11 PHE A 401 VAL A 402 1 O PHE A 401 N VAL A 420 SHEET 4 E11 ASN A 376 PHE A 377 1 O ASN A 376 N VAL A 402 SHEET 5 E11 LYS A 359 GLY A 367 1 O LYS A 359 N PHE A 377 SHEET 6 E11 HIS A 342 LYS A 350 1 O HIS A 342 N ALA A 360 SHEET 7 E11 HIS A 330 ILE A 331 1 N HIS A 330 O VAL A 347 SHEET 8 E11 MET A 313 GLU A 315 1 O MET A 313 N ILE A 331 SHEET 9 E11 TYR A 297 VAL A 299 1 O TYR A 297 N ILE A 314 SHEET 10 E11 THR A 279 LYS A 281 1 O THR A 279 N VAL A 298 SHEET 11 E11 TYR A 261 ILE A 262 1 O TYR A 261 N LEU A 280 SHEET 1 F 9 GLU A 267 ILE A 268 0 SHEET 2 F 9 LYS A 285 ILE A 286 1 N ILE A 286 O GLU A 267 SHEET 3 F 9 THR A 302 ILE A 303 1 N ILE A 303 O LYS A 285 SHEET 4 F 9 SER A 317 VAL A 319 1 O SER A 317 N THR A 302 SHEET 5 F 9 SER A 335 LEU A 337 1 O SER A 335 N SER A 318 SHEET 6 F 9 SER A 353 ILE A 354 1 N ILE A 354 O SER A 336 SHEET 7 F 9 CYS A 369 VAL A 371 1 O CYS A 369 N SER A 353 SHEET 8 F 9 THR A 394 ILE A 396 1 O THR A 394 N GLU A 370 SHEET 9 F 9 VAL A 412 LEU A 414 1 O VAL A 412 N VAL A 395 SHEET 1 G 3 ILE A 382 VAL A 384 0 SHEET 2 G 3 THR A 407 ILE A 409 1 O ILE A 408 N VAL A 384 SHEET 3 G 3 THR A 425 ILE A 426 1 O ILE A 426 N ILE A 409 CISPEP 1 GLY A 326 PRO A 327 0 0.03 CISPEP 2 ALA A 410 PRO A 411 0 -0.18 CRYST1 94.910 94.910 279.940 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010536 0.006083 0.000000 0.00000 SCALE2 0.000000 0.012166 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003572 0.00000 MASTER 391 0 0 15 45 0 0 6 0 0 0 36 END