HEADER BLOOD COAGULATION INHIBITOR 06-SEP-95 1FVL TITLE THE NUCLEAR MAGNETIC RESONANCE SOLUTION STRUCTURE OF TITLE 2 FLAVORIDIN, AN ANTAGONIST OF THE PLATELET GP IIB-IIIA TITLE 3 RECEPTOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: FLAVORIDIN; COMPND 3 CHAIN: A SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRIMERESURUS FLAVOVIRIDIS; SOURCE 3 ORGANISM_TAXID: 88087; SOURCE 4 ORGAN: BLOOD KEYWDS GP IIB/IIIA ANTAGONIST, BLOOD COAGULATION INHIBITOR EXPDTA SOLUTION NMR NUMMDL 18 AUTHOR H.SENN,W.KLAUS REVDAT 2 24-FEB-09 1FVL 1 VERSN REVDAT 1 29-JAN-96 1FVL 0 JRNL AUTH H.SENN,W.KLAUS JRNL TITL THE NUCLEAR MAGNETIC RESONANCE SOLUTION STRUCTURE JRNL TITL 2 OF FLAVORIDIN, AN ANTAGONIST OF THE PLATELET GP JRNL TITL 3 IIB-IIIA RECEPTOR. JRNL REF J.MOL.BIOL. V. 232 907 1993 JRNL REFN ISSN 0022-2836 JRNL PMID 8355277 JRNL DOI 10.1006/JMBI.1993.1439 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH W.KLAUS,C.BROGER,P.GERBER,H.SENN REMARK 1 TITL DETERMINATION OF THE DISULPHIDE BONDING PATTERN IN REMARK 1 TITL 2 PROTEINS BY LOCAL AND GLOBAL ANALYSIS OF NUCLEAR REMARK 1 TITL 3 MAGNETIC RESONANCE DATA: APPLICATION TO FLAVORIDIN REMARK 1 REF J.MOL.BIOL. V. 232 897 1993 REMARK 1 REFN ISSN 0022-2836 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NULL REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1FVL COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : NULL REMARK 210 PH : NULL REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : NULL REMARK 210 SPECTROMETER MODEL : NULL REMARK 210 SPECTROMETER MANUFACTURER : NULL REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 18 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLU A 3 25.82 -144.18 REMARK 500 1 ASP A 5 48.50 -164.21 REMARK 500 1 ALA A 28 -60.06 -96.32 REMARK 500 1 CYS A 36 -35.06 157.39 REMARK 500 1 LEU A 60 27.79 -148.52 REMARK 500 2 GLU A 3 -179.42 59.83 REMARK 500 2 ASP A 15 -162.53 58.20 REMARK 500 2 ALA A 17 -59.57 -168.85 REMARK 500 2 THR A 18 29.47 -155.35 REMARK 500 2 CYS A 36 -32.25 154.74 REMARK 500 2 ARG A 42 -2.80 92.34 REMARK 500 2 ARG A 49 74.03 -103.62 REMARK 500 2 ASN A 68 108.27 -161.80 REMARK 500 3 GLU A 3 70.36 54.66 REMARK 500 3 ASP A 5 56.22 -152.00 REMARK 500 3 THR A 18 64.76 -166.50 REMARK 500 3 CYS A 19 -32.52 -35.85 REMARK 500 3 GLN A 35 48.53 31.68 REMARK 500 3 CYS A 36 -51.77 165.28 REMARK 500 3 LYS A 41 177.73 -58.47 REMARK 500 3 ASP A 51 40.70 -97.24 REMARK 500 3 THR A 58 -66.94 -99.81 REMARK 500 3 ASP A 69 83.88 51.10 REMARK 500 4 ASP A 5 27.37 -145.04 REMARK 500 4 ALA A 16 71.01 24.98 REMARK 500 4 ALA A 17 -63.40 -158.24 REMARK 500 4 GLN A 26 23.37 -146.33 REMARK 500 4 GLN A 35 57.81 31.03 REMARK 500 4 LEU A 60 39.05 -142.22 REMARK 500 5 GLU A 3 -179.59 62.40 REMARK 500 5 CYS A 4 120.56 66.74 REMARK 500 5 SER A 10 40.86 -96.57 REMARK 500 5 ALA A 17 -57.69 -153.95 REMARK 500 5 CYS A 19 -0.60 75.96 REMARK 500 5 CYS A 27 -178.07 -170.80 REMARK 500 5 LEU A 31 6.40 59.08 REMARK 500 5 CYS A 32 25.93 -151.25 REMARK 500 5 CYS A 36 40.04 171.73 REMARK 500 5 ARG A 37 -174.64 -176.71 REMARK 500 5 ASP A 51 41.13 -96.12 REMARK 500 6 ASP A 15 -173.65 59.11 REMARK 500 6 ALA A 17 -58.04 -153.64 REMARK 500 6 THR A 18 31.61 -160.66 REMARK 500 6 CYS A 19 -40.20 79.77 REMARK 500 6 ALA A 28 -55.13 -127.69 REMARK 500 6 GLN A 35 45.97 -82.54 REMARK 500 6 CYS A 36 -39.55 171.80 REMARK 500 6 ARG A 42 35.28 87.55 REMARK 500 6 ASP A 51 43.73 -104.48 REMARK 500 7 GLU A 2 99.29 -64.17 REMARK 500 7 ASP A 5 35.06 -150.66 REMARK 500 7 CYS A 6 -75.12 -114.62 REMARK 500 7 THR A 18 60.50 -157.10 REMARK 500 7 CYS A 32 40.87 -109.78 REMARK 500 7 LYS A 41 177.00 -56.07 REMARK 500 7 ARG A 49 63.10 -109.36 REMARK 500 7 ASP A 51 43.02 -101.81 REMARK 500 7 CYS A 57 -159.03 -81.69 REMARK 500 8 GLU A 3 68.41 -159.11 REMARK 500 8 ASP A 5 28.26 -148.34 REMARK 500 8 ALA A 16 69.01 27.37 REMARK 500 8 ALA A 17 -70.34 -163.42 REMARK 500 8 GLN A 35 42.35 32.51 REMARK 500 8 CYS A 36 -53.21 159.30 REMARK 500 8 ARG A 42 16.05 80.63 REMARK 500 8 ASP A 51 38.29 -94.92 REMARK 500 8 LEU A 60 40.43 -100.04 REMARK 500 8 ASN A 68 -148.73 41.39 REMARK 500 9 CYS A 19 -1.45 76.31 REMARK 500 9 LEU A 21 151.59 -46.53 REMARK 500 9 GLN A 35 44.89 31.37 REMARK 500 9 CYS A 36 -55.24 154.34 REMARK 500 9 ARG A 42 3.73 89.93 REMARK 500 9 LEU A 60 28.36 -159.65 REMARK 500 9 ASP A 69 29.71 -142.67 REMARK 500 10 GLU A 3 64.80 -160.38 REMARK 500 10 ASP A 5 50.95 -153.65 REMARK 500 10 ALA A 16 55.88 31.38 REMARK 500 10 ALA A 17 -55.10 -167.46 REMARK 500 10 CYS A 19 16.50 58.44 REMARK 500 10 GLN A 35 47.51 -80.14 REMARK 500 10 CYS A 36 -32.11 157.32 REMARK 500 10 ARG A 42 13.78 81.45 REMARK 500 11 GLU A 3 169.82 62.75 REMARK 500 11 CYS A 4 120.41 65.53 REMARK 500 11 ASP A 5 42.77 -156.73 REMARK 500 11 ASP A 34 55.97 -167.17 REMARK 500 11 GLN A 35 41.08 -171.97 REMARK 500 11 ARG A 37 -172.20 -172.34 REMARK 500 11 LYS A 40 170.27 60.75 REMARK 500 11 ARG A 42 33.39 83.33 REMARK 500 11 CYS A 57 -169.48 -78.72 REMARK 500 11 ASN A 68 71.56 -170.32 REMARK 500 12 GLU A 3 128.53 70.87 REMARK 500 12 CYS A 4 124.80 64.80 REMARK 500 12 ASP A 5 41.90 -150.10 REMARK 500 12 ALA A 16 62.00 29.30 REMARK 500 12 ALA A 17 -65.43 -162.94 REMARK 500 12 GLN A 35 43.19 32.72 REMARK 500 12 CYS A 36 -47.79 165.42 REMARK 500 12 LYS A 40 160.50 -49.36 REMARK 500 12 ARG A 42 16.23 85.26 REMARK 500 12 ASP A 51 43.38 -101.73 REMARK 500 12 LEU A 60 16.82 -140.68 REMARK 500 13 CYS A 6 -86.57 -136.53 REMARK 500 13 SER A 10 39.22 -89.33 REMARK 500 13 GLN A 35 55.66 32.34 REMARK 500 13 ARG A 37 -171.14 -171.93 REMARK 500 13 LYS A 41 174.64 -55.95 REMARK 500 13 ASP A 51 41.62 -100.06 REMARK 500 13 LEU A 60 29.16 -151.18 REMARK 500 14 CYS A 4 127.20 163.70 REMARK 500 14 ASP A 15 -173.16 56.77 REMARK 500 14 ALA A 17 -58.16 -158.85 REMARK 500 14 THR A 18 32.05 -160.12 REMARK 500 14 CYS A 19 -44.92 79.11 REMARK 500 14 CYS A 36 -29.75 152.76 REMARK 500 14 ARG A 37 -167.86 -129.35 REMARK 500 14 ARG A 42 16.66 82.53 REMARK 500 14 ARG A 49 65.33 -103.89 REMARK 500 14 ASP A 51 43.44 -103.33 REMARK 500 14 ASN A 68 -146.98 31.73 REMARK 500 14 ASP A 69 42.07 -98.06 REMARK 500 15 ASP A 5 32.48 -153.04 REMARK 500 15 ALA A 16 36.43 -98.86 REMARK 500 15 ASP A 29 142.82 -173.42 REMARK 500 15 CYS A 32 25.78 -149.77 REMARK 500 15 GLN A 35 42.71 31.75 REMARK 500 15 CYS A 36 -52.50 154.96 REMARK 500 15 ARG A 37 -165.93 -103.10 REMARK 500 15 LEU A 60 39.11 -88.15 REMARK 500 16 GLU A 2 171.00 -57.07 REMARK 500 16 GLU A 3 102.55 -161.39 REMARK 500 16 ASP A 15 -164.39 53.31 REMARK 500 16 ALA A 17 -57.45 -165.45 REMARK 500 16 THR A 18 31.22 -159.03 REMARK 500 16 CYS A 19 -1.19 72.19 REMARK 500 16 ALA A 28 -57.67 -123.86 REMARK 500 16 CYS A 36 -29.72 153.01 REMARK 500 16 LYS A 41 -174.11 -60.73 REMARK 500 16 ARG A 42 39.53 74.77 REMARK 500 16 LEU A 60 33.60 -87.70 REMARK 500 17 GLU A 2 54.30 -159.24 REMARK 500 17 CYS A 4 123.22 179.10 REMARK 500 17 CYS A 6 -73.94 -135.01 REMARK 500 17 THR A 18 59.57 -158.84 REMARK 500 17 ASP A 29 161.80 179.91 REMARK 500 17 ASP A 34 53.80 -157.07 REMARK 500 17 GLN A 35 33.07 -171.01 REMARK 500 17 ARG A 37 -173.20 -170.13 REMARK 500 17 LYS A 41 178.66 -59.21 REMARK 500 17 ASP A 51 40.65 -97.65 REMARK 500 18 GLU A 2 66.66 -162.35 REMARK 500 18 GLU A 3 137.87 67.70 REMARK 500 18 CYS A 4 116.38 63.50 REMARK 500 18 ASP A 5 37.77 -157.55 REMARK 500 18 CYS A 6 -82.85 -115.63 REMARK 500 18 LEU A 31 12.23 55.27 REMARK 500 18 CYS A 32 -37.80 -150.78 REMARK 500 18 CYS A 36 -32.87 158.67 REMARK 500 18 LYS A 41 174.84 -55.04 REMARK 500 18 LEU A 60 41.79 -96.74 REMARK 500 18 ASN A 68 47.73 -171.78 REMARK 500 18 ASP A 69 85.17 49.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 ARG A 49 0.08 SIDE_CHAIN REMARK 500 2 ARG A 22 0.08 SIDE_CHAIN REMARK 500 2 ARG A 37 0.11 SIDE_CHAIN REMARK 500 2 ARG A 56 0.10 SIDE_CHAIN REMARK 500 3 ARG A 22 0.08 SIDE_CHAIN REMARK 500 5 ARG A 37 0.08 SIDE_CHAIN REMARK 500 5 ARG A 46 0.09 SIDE_CHAIN REMARK 500 6 ARG A 49 0.09 SIDE_CHAIN REMARK 500 7 ARG A 37 0.10 SIDE_CHAIN REMARK 500 7 ARG A 46 0.08 SIDE_CHAIN REMARK 500 9 ARG A 46 0.13 SIDE_CHAIN REMARK 500 9 ARG A 49 0.12 SIDE_CHAIN REMARK 500 10 ARG A 56 0.10 SIDE_CHAIN REMARK 500 11 ARG A 46 0.08 SIDE_CHAIN REMARK 500 11 ARG A 56 0.15 SIDE_CHAIN REMARK 500 12 ARG A 42 0.12 SIDE_CHAIN REMARK 500 13 ARG A 22 0.08 SIDE_CHAIN REMARK 500 13 ARG A 49 0.10 SIDE_CHAIN REMARK 500 15 ARG A 22 0.14 SIDE_CHAIN REMARK 500 16 ARG A 22 0.11 SIDE_CHAIN REMARK 500 18 ARG A 22 0.10 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 1FVL A 1 70 UNP P18619 DISF_TRIFL 1 70 SEQRES 1 A 70 GLY GLU GLU CYS ASP CYS GLY SER PRO SER ASN PRO CYS SEQRES 2 A 70 CYS ASP ALA ALA THR CYS LYS LEU ARG PRO GLY ALA GLN SEQRES 3 A 70 CYS ALA ASP GLY LEU CYS CYS ASP GLN CYS ARG PHE LYS SEQRES 4 A 70 LYS LYS ARG THR ILE CYS ARG ILE ALA ARG GLY ASP PHE SEQRES 5 A 70 PRO ASP ASP ARG CYS THR GLY LEU SER ASN ASP CYS PRO SEQRES 6 A 70 ARG TRP ASN ASP LEU SHEET 1 A 2 CYS A 14 ASP A 15 0 SHEET 2 A 2 LYS A 20 LEU A 21 -1 O LYS A 20 N ASP A 15 SHEET 1 B 2 ILE A 44 ARG A 46 0 SHEET 2 B 2 ASP A 55 ARG A 56 -1 N ASP A 55 O ARG A 46 SSBOND 1 CYS A 4 CYS A 19 1555 1555 2.09 SSBOND 2 CYS A 6 CYS A 14 1555 1555 2.05 SSBOND 3 CYS A 13 CYS A 36 1555 1555 2.02 SSBOND 4 CYS A 27 CYS A 33 1555 1555 2.01 SSBOND 5 CYS A 32 CYS A 57 1555 1555 2.05 SSBOND 6 CYS A 45 CYS A 64 1555 1555 1.95 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL MASTER 268 0 0 0 4 0 0 6 0 0 0 6 END