HEADER HYDROLASE/HYDROLASE INHIBITOR 28-AUG-00 1FOG TITLE THEORETICAL MODEL STRUCTURE OF ACTINIDIN WITH DIFFERENT TITLE 2 BIOLOGICALLY IMPORTANT INHIBITORS COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACTINIDIN; COMPND 3 CHAIN: A; COMPND 4 EC: 3.4.22.14; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: LEUPEPTIN; COMPND 7 CHAIN: B SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACTINIDIA CHINENSIS; SOURCE 3 ORGANISM_COMMON: CHINESE GOOSEBERRY, KIWIFRUIT; SOURCE 4 MOL_ID: 2; SOURCE 5 ORGANISM_SCIENTIFIC: ACTINOMYCES SP.; SOURCE 6 ORGANISM_COMMON: BACTERIA KEYWDS CYSTEINE PROTEINASE INHIBITOR, THIOL PROTEASE INHIBITOR, KEYWDS 2 HYDROLASE EXPDTA THEORETICAL MODEL AUTHOR S.BHATTACHARYA,A.BANERJEE REVDAT 1 25-OCT-00 1FOG 0 JRNL AUTH S.BHATTACHARYA,A.PAL,A.BERA,S.CHAKRABORTY,S.GHOSH, JRNL AUTH 2 A.BANERJEE JRNL TITL THEORETICAL MODEL STRUCTURE OF ACTINIDIN WITH JRNL TITL 2 DIFFERENT BIOLOGICALLY IMPORTANT INHIBITORS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH K.I.VARUGHESE,Y.SU,D.CROMWELL,S.HASNAIN,N.-H.XUONG REMARK 1 TITL CRYSTAL STRUCTURE OF ACTINIDIN-E-64 COMPLEX REMARK 1 REF BIOCHEMISTRY V. 31 5172 1992 REMARK 1 REFN ASTM BICHAW US ISSN 0006-2960 REMARK 1 REFERENCE 2 REMARK 1 AUTH E.SCHROEDER,C.PHILLIPS,E.GARMAN,K.HARLOS,C.CRAWFORD REMARK 1 TITL X-RAY CRYSTALLOGRAPHIC STRUCTURE OF A REMARK 1 TITL 2 PAPAIN-LEUPEPTIN COMPLEX REMARK 1 REF FEBS LETT. V. 315 38 1993 REMARK 1 REFN ASTM FEBLAL NE ISSN 0014-5793 REMARK 1 REFERENCE 3 REMARK 1 AUTH E.N.BAKER REMARK 1 TITL STRUCTURE OF ACTINIDIN, AFTER REFINEMENT AT 1.7 REMARK 1 TITL 2 ANGSTROMS RESOLUTION REMARK 1 REF J.MOL.BIOL. V. 141 441 1980 REMARK 1 REFN ASTM JMOBAK UK ISSN 0022-2836 REMARK 1 REFERENCE 4 REMARK 1 AUTH R.M.SCHULTZ,P.VERMA-NELSON,R.ORITZ,K.A.KOZLOWSKI, REMARK 1 AUTH 2 A.T.ORAWSKI,P.PAGAST,P.P.A.FRANKFATER REMARK 1 TITL ACTIVE AND INACTIVE FORMS OF THE TRANSITION-STATE REMARK 1 TITL 2 ANALOGUE PROTEASE INHIBITOR LEUPEPTIN:EXPLANATION REMARK 1 TITL 3 OF THE OBSERVED SLOW BINDING OF LEUPEPTIN TO REMARK 1 TITL 4 CATHEPSIN B AND PAPAIN REMARK 1 REF J.BIOL.CHEM. V. 264 1497 1989 REMARK 1 REFN ASTM JBCHA3 US ISSN 0021-9258 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : DISCOVER BIOSYM, INSIGHT II 95.0 REMARK 3 AUTHORS : MSI REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURE WAS OBTAINED THROUGH REMARK 3 KNOWLEDGE BASED MOLECULAR MODELLING METHOD USING BIOSYM REMARK 3 INSIGHT II 95.0. REMARK 4 REMARK 4 1FOG COMPLIES WITH FORMAT V. 2.3, 09-JULY-1998 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-OCT-2000. REMARK 100 THE RCSB ID CODE IS RCSB011771. REMARK 220 REMARK 220 EXPERIMENTAL DETAILS REMARK 220 EXPERIMENT TYPE : THEORETICAL MODELLING REMARK 220 REMARK 220 REMARK: NULL REMARK 225 REMARK 225 THEORETICAL MODEL REMARK 225 THE COORDINATES IN THIS ENTRY REPRESENT A MODEL STRUCTURE. REMARK 225 PROTEIN DATA BANK CONVENTIONS REQUIRE THAT CRYST1 AND REMARK 225 SCALE RECORDS BE INCLUDED, BUT THE VALUES ON THESE REMARK 225 RECORDS ARE MEANINGLESS. REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 87 CG CD OE1 OE2 REMARK 470 TYR A 218 O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 60 -106.34 43.75 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1C7X RELATED DB: PDB REMARK 900 1C7X CONTAINS MODEL STRUCTURE OF A CARICAIN D158E MUTANT IN REMARK 900 COMPLEX WITH ZPACK REMARK 900 RELATED ID: 1EUX RELATED DB: PDB REMARK 900 1EUX CONTAINS MODEL STRUCTURE OF A CARICAIN D158E MUTANT IN REMARK 900 COMPLEX WITH E-64C REMARK 900 RELATED ID: 1F1I RELATED DB: PDB REMARK 900 1F1I CONTAINS MODEL STRUCTURE OF A CARICAIN D158E MUTANT IN REMARK 900 COMPLEX WITH LEUPEPTIN (ACETYL-L-LEUCYL-L-LEUCYL-L-ARGINAL) REMARK 900 RELATED ID: 1F3Q RELATED DB: PDB REMARK 900 IF3Q CONTAINS MODEL STRUCTURE OF ACTINIDIN IN COMPLEX WITH REMARK 900 ZPACK (N-BENZYLOXYCARBONYL-L-PHENYL ALANYL-L-ALANINE REMARK 900 CHLOROMETHYL KETONE) DBREF 1FOG A 1 218 UNP P00785 ACTN_ACTCH 127 344 SEQADV 1FOG VAL A 100 UNP P00785 LEU 226 CONFLICT SEQADV 1FOG ALA A 101 UNP P00785 ASP 227 CONFLICT SEQADV 1FOG GLN A 146 UNP P00785 HIS 272 CONFLICT SEQRES 1 A 218 LEU PRO SER TYR VAL ASP TRP ARG SER ALA GLY ALA VAL SEQRES 2 A 218 VAL ASP ILE LYS SER GLN GLY GLU CYS GLY GLY CYS TRP SEQRES 3 A 218 ALA PHE SER ALA ILE ALA THR VAL GLU GLY ILE ASN LYS SEQRES 4 A 218 ILE VAL THR GLY VAL LEU ILE SER LEU SER GLU GLN GLU SEQRES 5 A 218 LEU ILE ASP CYS GLY ARG THR GLN ASN THR ARG GLY CYS SEQRES 6 A 218 ASN GLY GLY TYR ILE THR ASP GLY PHE GLN PHE ILE ILE SEQRES 7 A 218 ASN ASN GLY GLY ILE ASN THR GLU GLU ASN TYR PRO TYR SEQRES 8 A 218 THR ALA GLN ASP GLY GLU CYS ASN VAL ALA LEU GLN ASN SEQRES 9 A 218 GLU LYS TYR VAL THR ILE ASP THR TYR GLU ASN VAL PRO SEQRES 10 A 218 TYR ASN ASN GLU TRP ALA LEU GLN THR ALA VAL THR TYR SEQRES 11 A 218 GLN PRO VAL SER VAL ALA LEU ASP ALA ALA GLY ASP ALA SEQRES 12 A 218 PHE LYS GLN TYR SER SER GLY ILE PHE THR GLY PRO CYS SEQRES 13 A 218 GLY THR ALA ILE ASP HIS ALA VAL THR ILE VAL GLY TYR SEQRES 14 A 218 GLY THR GLU GLY GLY ILE ASP TYR TRP ILE VAL LYS ASN SEQRES 15 A 218 SER TRP ASP THR THR TRP GLY GLU GLU GLY TYR MET ARG SEQRES 16 A 218 ILE LEU ARG ASN VAL GLY GLY ALA GLY THR CYS GLY ILE SEQRES 17 A 218 ALA THR MET PRO SER TYR PRO VAL LYS TYR SEQRES 1 B 4 ACE LEU LEU ARG HET ACE B 300 3 HETNAM ACE ACETYL GROUP FORMUL 2 ACE C2 H4 O HELIX 1 1 ARG A 8 GLY A 11 5 4 HELIX 2 2 GLY A 24 GLY A 43 1 20 HELIX 3 3 SER A 49 GLY A 57 1 9 HELIX 4 4 ARG A 63 CYS A 65 5 3 HELIX 5 5 TYR A 69 GLY A 81 1 13 HELIX 6 6 ASN A 99 GLU A 105 1 7 HELIX 7 7 ASN A 120 GLN A 131 1 12 HELIX 8 8 GLY A 141 TYR A 147 1 7 HELIX 9 9 GLY A 204 ILE A 208 5 5 SHEET 1 A 5 ILE A 151 PHE A 152 0 SHEET 2 A 5 TYR A 193 LEU A 197 1 O ARG A 195 N PHE A 152 SHEET 3 A 5 ILE A 175 LYS A 181 -1 N TRP A 178 O ILE A 196 SHEET 4 A 5 HIS A 162 GLU A 172 -1 O THR A 165 N LYS A 181 SHEET 5 A 5 VAL A 5 ASP A 6 -1 N VAL A 5 O TYR A 169 SHEET 1 B 5 ILE A 151 PHE A 152 0 SHEET 2 B 5 TYR A 193 LEU A 197 1 O ARG A 195 N PHE A 152 SHEET 3 B 5 ILE A 175 LYS A 181 -1 N TRP A 178 O ILE A 196 SHEET 4 B 5 HIS A 162 GLU A 172 -1 O THR A 165 N LYS A 181 SHEET 5 B 5 VAL A 133 LEU A 137 -1 O VAL A 133 N ILE A 166 SHEET 1 C 2 THR A 112 ASN A 115 0 SHEET 2 C 2 SER A 213 VAL A 216 -1 O TYR A 214 N GLU A 114 SSBOND 1 CYS A 22 CYS A 65 SSBOND 2 CYS A 56 CYS A 98 SSBOND 3 CYS A 156 CYS A 206 LINK C ARG B 303 SG CYS A 25 CISPEP 1 GLY A 154 PRO A 155 0 3.49 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 0.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 0.000000 0.00000 MASTER 89 0 1 9 12 0 0 6 0 0 0 18 END