HEADER ION TRANSPORT 28-JAN-00 1EDX TITLE SOLUTION STRUCTURE OF AMINO TERMINUS OF BOVINE RHODOPSIN TITLE 2 (RESIDUES 1-40) COMPND MOL_ID: 1; COMPND 2 MOLECULE: RHODOPSIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: AMINO TERMINAL (RESIDUES 1-40); COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: BOVINE RHODOPSIN KEYWDS HELIX, ION TRANSPORT EXPDTA SOLUTION NMR MDLTYP MINIMIZED AVERAGE AUTHOR P.L.YEAGLE,A.SALLOUM,A.CHOPRA,N.BHAWSAR,L.ALI REVDAT 3 24-FEB-09 1EDX 1 VERSN REVDAT 2 01-APR-03 1EDX 1 JRNL REVDAT 1 09-AUG-00 1EDX 0 JRNL AUTH P.L.YEAGLE,A.SALLOUM,A.CHOPRA,N.BHAWSAR,L.ALI, JRNL AUTH 2 G.KUZMANOVSKI,J.L.ALDERFER,A.D.ALBERT JRNL TITL STRUCTURES OF THE INTRADISKAL LOOPS AND AMINO JRNL TITL 2 TERMINUS OF THE G-PROTEIN RECEPTOR, RHODOPSIN. JRNL REF J.PEPT.RES. V. 55 455 2000 JRNL REFN ISSN 1397-002X JRNL PMID 10888202 JRNL DOI 10.1034/J.1399-3011.2000.00707.X REMARK 1 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : DIANA REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1EDX COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-FEB-00. REMARK 100 THE RCSB ID CODE IS RCSB010476. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : NULL REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 2 MM PEPTIDE REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY, DQF-COSY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AMX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : FELIX, DIANA REMARK 210 METHOD USED : DISTANCE GEOMETRY REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 150 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 1 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 2 -67.64 65.59 REMARK 500 THR A 4 -55.68 -175.49 REMARK 500 GLU A 5 -27.90 62.61 REMARK 500 PHE A 9 69.88 34.33 REMARK 500 VAL A 11 112.46 69.65 REMARK 500 PRO A 12 8.30 -69.54 REMARK 500 ASN A 15 -90.28 -91.77 REMARK 500 TYR A 30 83.71 -157.62 REMARK 500 ALA A 32 -95.89 -123.03 REMARK 500 GLU A 33 24.16 -141.54 REMARK 500 PHE A 37 -28.74 73.87 REMARK 500 MET A 39 -58.63 70.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR A 30 0.10 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1EDS RELATED DB: PDB REMARK 900 FIRST INTRADISKAL LOOP OF BOVINE RHODOPSIN REMARK 900 RELATED ID: 1EDV RELATED DB: PDB REMARK 900 SECOND INTRADISKAL LOOP OF BOVINE RHODOPSIN REMARK 900 RELATED ID: 1EDW RELATED DB: PDB REMARK 900 THIRD INTRADISKAL LOOP OF BOVINE RHODOPSIN DBREF 1EDX A 1 40 UNP P02699 OPSD_BOVIN 1 40 SEQRES 1 A 40 MET ASN GLY THR GLU GLY PRO ASN PHE TYR VAL PRO PHE SEQRES 2 A 40 SER ASN LYS THR GLY VAL VAL ARG SER PRO PHE GLU ALA SEQRES 3 A 40 PRO GLN TYR TYR LEU ALA GLU PRO TRP GLU PHE SER MET SEQRES 4 A 40 LEU HELIX 1 1 LYS A 16 ARG A 21 1 6 HELIX 2 2 GLU A 25 TYR A 30 1 6 CISPEP 1 PRO A 23 PHE A 24 0 1.10 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MASTER 98 0 0 2 0 0 0 6 0 0 0 4 END