HEADER CELL ADHESION PROTEIN 15-MAY-96 1EDH TITLE E-CADHERIN DOMAINS 1 AND 2 IN COMPLEX WITH CALCIUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: E-CADHERIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: EPITHELIAL CADHERIN DOMAINS 1 AND 2, ECAD12; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 TISSUE: EPITHELIAL; SOURCE 6 CELLULAR_LOCATION: CELL SURFACE; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: AR58; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PAS KEYWDS CADHERIN, CELL ADHESION PROTEIN, CALCIUM BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR B.NAGAR,M.OVERDUIN,M.IKURA,J.M.RINI REVDAT 2 24-FEB-09 1EDH 1 VERSN REVDAT 1 11-JAN-97 1EDH 0 JRNL AUTH B.NAGAR,M.OVERDUIN,M.IKURA,J.M.RINI JRNL TITL STRUCTURAL BASIS OF CALCIUM-INDUCED E-CADHERIN JRNL TITL 2 RIGIDIFICATION AND DIMERIZATION. JRNL REF NATURE V. 380 360 1996 JRNL REFN ISSN 0028-0836 JRNL PMID 8598933 JRNL DOI 10.1038/380360A0 REMARK 1 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.1 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 5.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 83.400 REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 33174 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.262 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3333 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.07 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 54.60 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1961 REMARK 3 BIN R VALUE (WORKING SET) : 0.2570 REMARK 3 BIN FREE R VALUE : 0.2560 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 9.60 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 209 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3228 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 8 REMARK 3 SOLVENT ATOMS : 249 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.08 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.89 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.38 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 26.96 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.20 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PARHCSDX_3.1.PRO REMARK 3 PARAMETER FILE 2 : CAD.PAR REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : TOPHCSDX_3.1.PRO REMARK 3 TOPOLOGY FILE 2 : NCAD.TOP REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE ELECTRON DENSITY FOR THE LOOP REMARK 3 BETWEEN STRANDS B AND C (RESIDUES 27 - 32) IS WEAK. REMARK 4 REMARK 4 1EDH COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-APR-95 REMARK 200 TEMPERATURE (KELVIN) : 113 REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : A1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.908 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : PRINCETON 2K REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37605 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 22.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 88.3 REMARK 200 DATA REDUNDANCY : 2.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05300 REMARK 200 FOR THE DATA SET : 13.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 63.6 REMARK 200 DATA REDUNDANCY IN SHELL : 1.59 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.14600 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: THE INITIAL MODEL WAS REMARK 200 OBTAINED FROM A COMBINATION OF MULTI-WAVELENGTH ANOMALOUS REMARK 200 DIFFRACTION (MAD) AND REAL SPACE AVERAGING TECHNIQUES. THE MAD REMARK 200 DATA WAS TAKEN AT THE MERCURY L(III) EDGE AT 3 DIFFERENT REMARK 200 WAVELENGTHS (CHESS BEAMLINE F2). REAL SPACE AVERAGING WAS USED REMARK 200 TO IMPROVE THE MAPS. REMARK 200 SOFTWARE USED: PHASES REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.2 M AMMONIUM SULFATE 0.01 M REMARK 280 CALCIUM CHLORIDE 0.1 M TRIS-HCL BUFFER, PH 9.0 0.003 M SODIUM REMARK 280 AZIDE REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 60.82850 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.40100 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 60.82850 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 40.40100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: REMARK 300 THE ASYMMETRIC UNIT (MOLECULES A AND B) CONTAINS A REMARK 300 CALCIUM MEDIATED DIMER. REMARK 300 REMARK 300 BOTH MOLECULES IN THE ASYMMETRIC UNIT CONTAIN THREE REMARK 300 CALCIUM IONS (CA 2+) AND ONE MERCURY ATOM (HG). REMARK 300 THE MERCURY ATOMS ARE BOUND TO AN EXPOSED CYSTEINE REMARK 300 RESIDUE IN THE N-TERMINAL DOMAIN. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -1 REMARK 465 ARG A 0 REMARK 465 ASP A 1 REMARK 465 TRP A 2 REMARK 465 ILE A 214 REMARK 465 ASN A 215 REMARK 465 ASP A 216 REMARK 465 ASN A 217 REMARK 465 ALA A 218 REMARK 465 PRO A 219 REMARK 465 VAL A 220 REMARK 465 PHE A 221 REMARK 465 ASN A 222 REMARK 465 PRO A 223 REMARK 465 SER A 224 REMARK 465 MET B -1 REMARK 465 ARG B 0 REMARK 465 ASP B 1 REMARK 465 TRP B 2 REMARK 465 ILE B 214 REMARK 465 ASN B 215 REMARK 465 ASP B 216 REMARK 465 ASN B 217 REMARK 465 ALA B 218 REMARK 465 PRO B 219 REMARK 465 VAL B 220 REMARK 465 PHE B 221 REMARK 465 ASN B 222 REMARK 465 PRO B 223 REMARK 465 SER B 224 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 21 -64.03 -108.80 REMARK 500 ALA A 43 -91.52 -117.07 REMARK 500 GLU A 156 42.00 -92.25 REMARK 500 ASP A 195 -167.31 -78.93 REMARK 500 LEU B 21 -58.10 -120.24 REMARK 500 ALA B 43 -97.86 -110.49 REMARK 500 ASP B 137 98.63 -69.34 REMARK 500 GLU B 156 43.67 -91.62 REMARK 500 ASN B 161 40.85 75.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 104 O REMARK 620 2 ASN A 143 O 176.7 REMARK 620 3 ASP A 195 OD2 91.5 85.2 REMARK 620 4 ASP A 134 OD1 91.4 90.6 130.4 REMARK 620 5 ASP A 136 OD2 80.1 102.9 150.7 78.2 REMARK 620 6 ASN A 102 OD1 98.6 81.1 79.1 148.9 74.6 REMARK 620 7 ASP A 134 OD2 93.0 86.1 79.1 51.3 129.0 155.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 302 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 100 OD1 REMARK 620 2 ASP A 103 OD1 159.4 REMARK 620 3 ASP A 136 OD1 95.5 89.2 REMARK 620 4 GLU A 69 OE1 119.3 78.4 104.6 REMARK 620 5 GLU A 69 OE2 76.6 123.8 85.5 49.7 REMARK 620 6 GLN A 101 O 82.8 77.9 83.6 154.7 155.5 REMARK 620 7 GLU A 11 OE2 81.2 90.4 169.1 85.9 103.8 85.7 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 303 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 11 OE1 REMARK 620 2 ASP A 67 OD1 90.7 REMARK 620 3 GLU A 69 OE1 90.5 93.1 REMARK 620 4 ASP A 103 OD2 99.7 156.8 107.4 REMARK 620 5 HOH A 313 O 170.4 90.4 79.9 82.8 REMARK 620 6 HOH A 407 O 90.8 77.4 170.5 81.7 98.8 REMARK 620 7 ASP A 103 OD1 90.3 159.3 66.2 42.4 85.4 123.2 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 401 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN B 104 O REMARK 620 2 ASN B 143 O 172.2 REMARK 620 3 ASP B 134 OD2 94.3 86.9 REMARK 620 4 ASP B 195 OD2 96.0 91.8 80.0 REMARK 620 5 ASP B 134 OD1 91.7 83.0 52.0 131.9 REMARK 620 6 ASP B 136 OD2 76.5 96.8 130.3 148.7 79.1 REMARK 620 7 ASN B 102 OD1 98.7 82.8 156.7 79.5 145.8 71.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 402 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 11 OE2 REMARK 620 2 ASP B 100 OD1 86.3 REMARK 620 3 ASP B 136 OD1 166.3 101.4 REMARK 620 4 GLU B 69 OE1 83.6 121.2 101.5 REMARK 620 5 GLU B 69 OE2 104.8 79.3 87.9 48.6 REMARK 620 6 GLN B 101 O 86.9 80.9 83.3 155.2 156.2 REMARK 620 7 ASP B 103 OD1 88.6 158.6 80.1 78.7 122.1 78.1 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 403 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 11 OE1 REMARK 620 2 ASP B 67 OD1 89.9 REMARK 620 3 GLU B 69 OE1 91.3 95.9 REMARK 620 4 ASP B 103 OD2 93.1 157.5 106.3 REMARK 620 5 HOH B 457 O 88.7 82.8 178.6 75.0 REMARK 620 6 HOH B 458 O 170.5 99.0 84.5 80.0 95.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG B 400 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 9 SG REMARK 620 2 GLU B 13 OE1 97.0 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG A 300 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 301 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 302 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 303 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG B 400 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 401 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 402 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 403 DBREF 1EDH A 0 224 UNP P09803 CADH1_MOUSE 156 380 DBREF 1EDH B 0 224 UNP P09803 CADH1_MOUSE 156 380 SEQRES 1 A 226 MET ARG ASP TRP VAL ILE PRO PRO ILE SER CYS PRO GLU SEQRES 2 A 226 ASN GLU LYS GLY GLU PHE PRO LYS ASN LEU VAL GLN ILE SEQRES 3 A 226 LYS SER ASN ARG ASP LYS GLU THR LYS VAL PHE TYR SER SEQRES 4 A 226 ILE THR GLY GLN GLY ALA ASP LYS PRO PRO VAL GLY VAL SEQRES 5 A 226 PHE ILE ILE GLU ARG GLU THR GLY TRP LEU LYS VAL THR SEQRES 6 A 226 GLN PRO LEU ASP ARG GLU ALA ILE ALA LYS TYR ILE LEU SEQRES 7 A 226 TYR SER HIS ALA VAL SER SER ASN GLY GLU ALA VAL GLU SEQRES 8 A 226 ASP PRO MET GLU ILE VAL ILE THR VAL THR ASP GLN ASN SEQRES 9 A 226 ASP ASN ARG PRO GLU PHE THR GLN GLU VAL PHE GLU GLY SEQRES 10 A 226 SER VAL ALA GLU GLY ALA VAL PRO GLY THR SER VAL MET SEQRES 11 A 226 LYS VAL SER ALA THR ASP ALA ASP ASP ASP VAL ASN THR SEQRES 12 A 226 TYR ASN ALA ALA ILE ALA TYR THR ILE VAL SER GLN ASP SEQRES 13 A 226 PRO GLU LEU PRO HIS LYS ASN MET PHE THR VAL ASN ARG SEQRES 14 A 226 ASP THR GLY VAL ILE SER VAL LEU THR SER GLY LEU ASP SEQRES 15 A 226 ARG GLU SER TYR PRO THR TYR THR LEU VAL VAL GLN ALA SEQRES 16 A 226 ALA ASP LEU GLN GLY GLU GLY LEU SER THR THR ALA LYS SEQRES 17 A 226 ALA VAL ILE THR VAL LYS ASP ILE ASN ASP ASN ALA PRO SEQRES 18 A 226 VAL PHE ASN PRO SER SEQRES 1 B 226 MET ARG ASP TRP VAL ILE PRO PRO ILE SER CYS PRO GLU SEQRES 2 B 226 ASN GLU LYS GLY GLU PHE PRO LYS ASN LEU VAL GLN ILE SEQRES 3 B 226 LYS SER ASN ARG ASP LYS GLU THR LYS VAL PHE TYR SER SEQRES 4 B 226 ILE THR GLY GLN GLY ALA ASP LYS PRO PRO VAL GLY VAL SEQRES 5 B 226 PHE ILE ILE GLU ARG GLU THR GLY TRP LEU LYS VAL THR SEQRES 6 B 226 GLN PRO LEU ASP ARG GLU ALA ILE ALA LYS TYR ILE LEU SEQRES 7 B 226 TYR SER HIS ALA VAL SER SER ASN GLY GLU ALA VAL GLU SEQRES 8 B 226 ASP PRO MET GLU ILE VAL ILE THR VAL THR ASP GLN ASN SEQRES 9 B 226 ASP ASN ARG PRO GLU PHE THR GLN GLU VAL PHE GLU GLY SEQRES 10 B 226 SER VAL ALA GLU GLY ALA VAL PRO GLY THR SER VAL MET SEQRES 11 B 226 LYS VAL SER ALA THR ASP ALA ASP ASP ASP VAL ASN THR SEQRES 12 B 226 TYR ASN ALA ALA ILE ALA TYR THR ILE VAL SER GLN ASP SEQRES 13 B 226 PRO GLU LEU PRO HIS LYS ASN MET PHE THR VAL ASN ARG SEQRES 14 B 226 ASP THR GLY VAL ILE SER VAL LEU THR SER GLY LEU ASP SEQRES 15 B 226 ARG GLU SER TYR PRO THR TYR THR LEU VAL VAL GLN ALA SEQRES 16 B 226 ALA ASP LEU GLN GLY GLU GLY LEU SER THR THR ALA LYS SEQRES 17 B 226 ALA VAL ILE THR VAL LYS ASP ILE ASN ASP ASN ALA PRO SEQRES 18 B 226 VAL PHE ASN PRO SER HET HG A 300 1 HET CA A 301 1 HET CA A 302 1 HET CA A 303 1 HET HG B 400 1 HET CA B 401 1 HET CA B 402 1 HET CA B 403 1 HETNAM HG MERCURY (II) ION HETNAM CA CALCIUM ION FORMUL 3 HG 2(HG 2+) FORMUL 4 CA 6(CA 2+) FORMUL 11 HOH *249(H2 O) HELIX 1 1 ASN A 27 LYS A 30 5 4 HELIX 2 2 LEU A 196 GLY A 198 5 3 HELIX 3 3 ASN B 27 LYS B 30 5 4 HELIX 4 4 ASP B 195 GLY B 198 1 4 SHEET 1 A 4 ILE A 7 PRO A 10 0 SHEET 2 A 4 MET A 92 THR A 99 1 N THR A 97 O ILE A 7 SHEET 3 A 4 LYS A 73 SER A 82 -1 N SER A 78 O MET A 92 SHEET 4 A 4 VAL A 34 THR A 39 -1 N THR A 39 O TYR A 77 SHEET 1 B 3 PHE A 51 ILE A 53 0 SHEET 2 B 3 TRP A 59 VAL A 62 -1 N LYS A 61 O ILE A 52 SHEET 3 B 3 LYS A 19 GLN A 23 -1 N VAL A 22 O LEU A 60 SHEET 1 C 4 VAL A 112 ALA A 118 0 SHEET 2 C 4 SER A 202 LYS A 212 1 N LYS A 206 O PHE A 113 SHEET 3 C 4 THR A 186 ALA A 194 -1 N ALA A 193 O THR A 203 SHEET 4 C 4 ALA A 147 ASP A 154 -1 N ASP A 154 O THR A 188 SHEET 1 D 3 PHE A 163 VAL A 165 0 SHEET 2 D 3 VAL A 171 VAL A 174 -1 N SER A 173 O THR A 164 SHEET 3 D 3 SER A 126 LYS A 129 -1 N MET A 128 O ILE A 172 SHEET 1 E 4 ILE B 7 PRO B 10 0 SHEET 2 E 4 MET B 92 THR B 99 1 N THR B 97 O ILE B 7 SHEET 3 E 4 LYS B 73 SER B 82 -1 N SER B 78 O MET B 92 SHEET 4 E 4 VAL B 34 THR B 39 -1 N THR B 39 O TYR B 77 SHEET 1 F 3 PHE B 51 ILE B 53 0 SHEET 2 F 3 TRP B 59 VAL B 62 -1 N LYS B 61 O ILE B 52 SHEET 3 F 3 LYS B 19 GLN B 23 -1 N VAL B 22 O LEU B 60 SHEET 1 G 4 VAL B 112 ALA B 118 0 SHEET 2 G 4 SER B 202 LYS B 212 1 N LYS B 206 O PHE B 113 SHEET 3 G 4 THR B 186 ALA B 194 -1 N ALA B 193 O THR B 203 SHEET 4 G 4 ALA B 147 ASP B 154 -1 N ASP B 154 O THR B 188 SHEET 1 H 3 PHE B 163 VAL B 165 0 SHEET 2 H 3 VAL B 171 VAL B 174 -1 N SER B 173 O THR B 164 SHEET 3 H 3 SER B 126 LYS B 129 -1 N MET B 128 O ILE B 172 LINK CA CA A 301 O ASN A 104 1555 1555 2.35 LINK CA CA A 301 O ASN A 143 1555 1555 2.40 LINK CA CA A 301 OD2 ASP A 195 1555 1555 2.31 LINK CA CA A 302 OD1 ASP A 100 1555 1555 2.32 LINK CA CA A 302 OD1 ASP A 103 1555 1555 2.16 LINK CA CA A 302 OD1 ASP A 136 1555 1555 2.25 LINK CA CA A 303 OE1 GLU A 11 1555 1555 2.32 LINK CA CA A 303 OD1 ASP A 67 1555 1555 2.35 LINK CA CA A 303 OE1 GLU A 69 1555 1555 2.28 LINK CA CA A 303 OD2 ASP A 103 1555 1555 2.23 LINK CA CA B 401 O ASN B 104 1555 1555 2.24 LINK CA CA B 401 O ASN B 143 1555 1555 2.36 LINK CA CA B 402 OE2 GLU B 11 1555 1555 2.35 LINK CA CA B 402 OD1 ASP B 100 1555 1555 2.30 LINK CA CA B 402 OD1 ASP B 136 1555 1555 2.33 LINK CA CA B 403 OE1 GLU B 11 1555 1555 2.31 LINK CA CA B 403 OD1 ASP B 67 1555 1555 2.13 LINK CA CA B 403 OE1 GLU B 69 1555 1555 2.23 LINK HG HG A 300 SG CYS A 9 1555 1555 2.59 LINK CA CA A 301 OD1 ASP A 134 1555 1555 2.56 LINK CA CA A 301 OD2 ASP A 136 1555 1555 2.42 LINK CA CA A 301 OD1 ASN A 102 1555 1555 2.44 LINK CA CA A 301 OD2 ASP A 134 1555 1555 2.49 LINK CA CA A 302 OE1 GLU A 69 1555 1555 2.72 LINK CA CA A 302 OE2 GLU A 69 1555 1555 2.48 LINK CA CA A 302 O GLN A 101 1555 1555 2.43 LINK CA CA A 302 OE2 GLU A 11 1555 1555 2.41 LINK CA CA A 303 O HOH A 313 1555 1555 2.46 LINK CA CA A 303 O HOH A 407 1555 1555 2.15 LINK CA CA A 303 OD1 ASP A 103 1555 1555 3.23 LINK HG HG B 400 SG CYS B 9 1555 1555 2.32 LINK HG HG B 400 OE1 GLU B 13 1555 1555 3.07 LINK CA CA B 401 OD2 ASP B 134 1555 1555 2.44 LINK CA CA B 401 OD2 ASP B 195 1555 1555 2.41 LINK CA CA B 401 OD1 ASP B 134 1555 1555 2.54 LINK CA CA B 401 OD2 ASP B 136 1555 1555 2.44 LINK CA CA B 401 OD1 ASN B 102 1555 1555 2.44 LINK CA CA B 402 OE1 GLU B 69 1555 1555 2.79 LINK CA CA B 402 OE2 GLU B 69 1555 1555 2.53 LINK CA CA B 402 O GLN B 101 1555 1555 2.47 LINK CA CA B 402 OD1 ASP B 103 1555 1555 2.41 LINK CA CA B 403 OD2 ASP B 103 1555 1555 2.45 LINK CA CA B 403 O HOH B 457 1555 1555 2.14 LINK CA CA B 403 O HOH B 458 1555 1555 2.23 CISPEP 1 PHE A 17 PRO A 18 0 -0.04 CISPEP 2 PRO A 46 PRO A 47 0 -0.11 CISPEP 3 ASP A 154 PRO A 155 0 0.16 CISPEP 4 LEU A 157 PRO A 158 0 -0.11 CISPEP 5 PHE B 17 PRO B 18 0 0.23 CISPEP 6 PRO B 46 PRO B 47 0 -0.10 CISPEP 7 ASP B 154 PRO B 155 0 0.01 CISPEP 8 LEU B 157 PRO B 158 0 0.06 SITE 1 AC1 1 CYS A 9 SITE 1 AC2 6 ASN A 102 ASN A 104 ASP A 134 ASP A 136 SITE 2 AC2 6 ASN A 143 ASP A 195 SITE 1 AC3 6 GLU A 11 GLU A 69 ASP A 100 GLN A 101 SITE 2 AC3 6 ASP A 103 ASP A 136 SITE 1 AC4 6 GLU A 11 ASP A 67 GLU A 69 ASP A 103 SITE 2 AC4 6 HOH A 313 HOH A 407 SITE 1 AC5 2 CYS B 9 GLU B 13 SITE 1 AC6 6 ASN B 102 ASN B 104 ASP B 134 ASP B 136 SITE 2 AC6 6 ASN B 143 ASP B 195 SITE 1 AC7 6 GLU B 11 GLU B 69 ASP B 100 GLN B 101 SITE 2 AC7 6 ASP B 103 ASP B 136 SITE 1 AC8 6 GLU B 11 ASP B 67 GLU B 69 ASP B 103 SITE 2 AC8 6 HOH B 457 HOH B 458 CRYST1 121.657 80.802 72.635 90.00 116.65 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008220 0.000000 0.004125 0.00000 SCALE2 0.000000 0.012376 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015404 0.00000 MASTER 389 0 8 4 28 0 14 6 0 0 0 36 END