HEADER ELECTRON TRANSPORT PROTEINS 30-MAY-00 1E2Z TITLE Q158L MUTANT OF CYTOCHROME F FROM CHLAMYDOMONAS REINHARDTII COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOCHROME F; COMPND 3 CHAIN: A, B, C; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CHLAMYDOMONAS REINHARDTII; SOURCE 3 ORGANISM_TAXID: 3055; SOURCE 4 GENE: PETA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: MV1190; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PUCPF2; SOURCE 9 EXPRESSION_SYSTEM_GENE: CCMABCDEFGH KEYWDS ELECTRON TRANSPORT PROTEINS, INTERNAL WATER CHAIN, KEYWDS 2 PHOTOSYNTHETIC FUNCTION IMPAIRED EXPDTA X-RAY DIFFRACTION AUTHOR G.SAINZ,C.J.CARRELL,M.V.PONAMAREV,G.M.SORIANO,W.A.CRAMER, AUTHOR 2 J.L.SMITH REVDAT 2 24-FEB-09 1E2Z 1 VERSN REVDAT 1 04-AUG-00 1E2Z 0 JRNL AUTH G.SAINZ,C.J.CARRELL,M.V.PONAMAREV,G.M.SORIANO, JRNL AUTH 2 W.A.CRAMER,J.L.SMITH JRNL TITL INTERRUPTION OF THE INTERNAL WATER CHAIN OF JRNL TITL 2 CYTOCHROME F IMPAIRS PHOTOSYNTHETIC FUNCTION JRNL REF BIOCHEMISTRY V. 39 9164 2000 JRNL REFN ISSN 0006-2960 JRNL PMID 10924110 JRNL DOI 10.1021/BI0004596 REMARK 2 REMARK 2 RESOLUTION. 2.5 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.16 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.0 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1709463.72 REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 94.5 REMARK 3 NUMBER OF REFLECTIONS : 28819 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.279 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.1 REMARK 3 FREE R VALUE TEST SET COUNT : 1475 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.007 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.66 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 75.8 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3585 REMARK 3 BIN R VALUE (WORKING SET) : 0.315 REMARK 3 BIN FREE R VALUE : 0.401 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.1 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 194 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.029 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5745 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 129 REMARK 3 SOLVENT ATOMS : 277 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 34.8 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.9 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -6.93 REMARK 3 B22 (A**2) : 3.89 REMARK 3 B33 (A**2) : 3.04 REMARK 3 B12 (A**2) : 0.00 REMARK 3 B13 (A**2) : 0.00 REMARK 3 B23 (A**2) : 0.00 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.33 REMARK 3 ESD FROM SIGMAA (A) : 0.28 REMARK 3 LOW RESOLUTION CUTOFF (A) : 47.14 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.45 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.44 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.4 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 25.3 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.11 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 3.45 ; 1.50 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 5.10 ; 2.00 REMARK 3 SIDE-CHAIN BOND (A**2) : 6.06 ; 2.00 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 7.99 ; 2.50 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.399825 REMARK 3 BSOL : 60 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : MY_TOPPAR:PARAM19X.HEME REMARK 3 PARAMETER FILE 4 : MY_TOPPAR:ION.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : MY_TOPPAR:TOPH19CNS.HEME REMARK 3 TOPOLOGY FILE 4 : MY_TOPPAR:ION.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1E2Z COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 30-MAY-00. REMARK 100 THE PDBE ID CODE IS EBI-5005. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-APR-99 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.70 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 14-BM-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29632 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 47.140 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : 0.07800 REMARK 200 R SYM (I) : 0.07800 REMARK 200 FOR THE DATA SET : 22.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 73.1 REMARK 200 DATA REDUNDANCY IN SHELL : 2.34 REMARK 200 R MERGE FOR SHELL (I) : 0.20100 REMARK 200 R SYM FOR SHELL (I) : 0.20100 REMARK 200 FOR SHELL : 4.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 1E2V REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.63 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: THE PROTEIN WAS BUFFERED IN REMARK 280 10 MM NA2HPO4/NAH2PO4, 1 MM DTT, PH 7.5 REMARK 280 AND THE RESERVOIR CONTAINED 100 MM MES, PH 6.7, REMARK 280 50 MM AMMONIUM FLUORIDE 5% GLYCEROL AND 19-21% PEG 3350. REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 36.97500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.32000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 47.33000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 61.32000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 36.97500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 47.33000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 GENERATING THE BIOMOLECULE REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 CHAIN A, B, C ENGINEERED MUTATION GLN158LEU. REMARK 400 ONLY THE SOLUBLE DOMAIN OF THE MATURE MEMBRANE PROTEIN REMARK 400 WAS EXPRESSED AND CRYSTALLIZED (251 A.A. OF 317 A.A.). REMARK 400 31-RESIDUE PRE-SEQUENCE IS A THYLAKOID IMPORT SIGNAL REMARK 400 C-TERMINAL 35-RESIDUES ARE THE MEMBRANE ANCHOR. REMARK 400 BOTH WERE EXCLUDED FROM THE EXPRESSED CONSTRUCT. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 22 -9.99 -58.75 REMARK 500 ASP A 42 57.77 35.91 REMARK 500 LYS A 137 -39.25 -134.57 REMARK 500 ASN A 168 37.24 -99.01 REMARK 500 SER A 186 -143.43 31.27 REMARK 500 GLU A 187 -23.26 -141.59 REMARK 500 VAL B 20 -19.84 -42.92 REMARK 500 ALA B 22 -6.39 -57.13 REMARK 500 PRO B 41 172.04 -59.34 REMARK 500 ASP B 42 33.74 27.66 REMARK 500 TYR B 53 149.53 -170.48 REMARK 500 ASP B 54 95.50 -64.70 REMARK 500 TYR B 123 34.38 -144.16 REMARK 500 ASN B 168 48.15 -97.05 REMARK 500 LYS B 198 -172.38 -55.61 REMARK 500 VAL C 20 -16.66 -48.47 REMARK 500 HIS C 25 75.65 -105.18 REMARK 500 ASP C 42 45.15 32.31 REMARK 500 ASN C 99 45.36 -97.35 REMARK 500 SER C 106 141.96 -173.83 REMARK 500 PRO C 107 -16.80 -45.09 REMARK 500 ASN C 168 48.85 -108.16 REMARK 500 ILE C 179 84.33 -64.45 REMARK 500 SER C 186 110.65 -163.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 900 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 25 NE2 REMARK 620 2 HEC A 900 ND 89.2 REMARK 620 3 TYR A 1 N 177.3 90.6 REMARK 620 4 HEC A 900 NC 93.3 89.9 89.5 REMARK 620 5 HEC A 900 NA 89.7 89.5 87.5 176.9 REMARK 620 6 HEC A 900 NB 86.8 176.0 93.4 89.9 90.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC B 900 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 25 NE2 REMARK 620 2 HEC B 900 NA 89.8 REMARK 620 3 HEC B 900 NB 92.3 90.5 REMARK 620 4 TYR B 1 N 171.9 84.2 93.3 REMARK 620 5 HEC B 900 ND 87.3 88.3 178.8 87.0 REMARK 620 6 HEC B 900 NC 93.8 176.3 89.7 92.1 91.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC C 900 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HEC C 900 NA REMARK 620 2 HIS C 25 NE2 87.3 REMARK 620 3 HEC C 900 NB 91.0 85.2 REMARK 620 4 HEC C 900 NC 175.9 94.7 85.6 REMARK 620 5 HEC C 900 ND 90.2 90.5 175.5 93.4 REMARK 620 6 TYR C 1 N 82.7 167.0 103.2 95.8 81.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEC A 900 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEC B 900 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEC C 900 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1E2V RELATED DB: PDB REMARK 900 N153Q MUTANT OF CYTOCHROME F FROM CHLAMYDOMONAS REINHARDTII REMARK 900 RELATED ID: 1E2W RELATED DB: PDB REMARK 900 N168F MUTANT OF CYTOCHROME F FROM CHLAMYDOMONAS REINHARDTII REMARK 900 RELATED ID: 1CFM RELATED DB: PDB REMARK 900 WILD TYPE CYTOCHROME F FROM CHLAMYDOMONAS REINHARDTII REMARK 900 RELATED ID: 1HCZ RELATED DB: PDB REMARK 900 LUMEN-SIDE DOMAIN OF REDUCED CYTOCHROME F AT -35 DEGREES REMARK 900 CELSIUS (BRASSICA RAPA) REMARK 900 RELATED ID: 1CI3 RELATED DB: PDB REMARK 900 CYTOCHROME F FROM THE B6F COMPLEX OF PHORMIDIUM LAMINOSUM REMARK 900 RELATED ID: 1EWH RELATED DB: PDB REMARK 900 STRUCTURE OF CYTOCHROME F FROM CHLAMYDOMONAS REINHARDTII DBREF 1E2Z A 1 251 UNP P23577 CYF_CHLRE 32 282 DBREF 1E2Z B 1 251 UNP P23577 CYF_CHLRE 32 282 DBREF 1E2Z C 1 251 UNP P23577 CYF_CHLRE 32 282 SEQADV 1E2Z LEU A 158 UNP G217899 GLN 189 ENGINEERED MUTATION SEQADV 1E2Z LEU B 158 UNP G217899 GLN 189 ENGINEERED MUTATION SEQADV 1E2Z LEU C 158 UNP G217899 GLN 189 ENGINEERED MUTATION SEQRES 1 A 251 TYR PRO VAL PHE ALA GLN GLN ASN TYR ALA ASN PRO ARG SEQRES 2 A 251 GLU ALA ASN GLY ARG ILE VAL CYS ALA ASN CYS HIS LEU SEQRES 3 A 251 ALA GLN LYS ALA VAL GLU ILE GLU VAL PRO GLN ALA VAL SEQRES 4 A 251 LEU PRO ASP THR VAL PHE GLU ALA VAL ILE GLU LEU PRO SEQRES 5 A 251 TYR ASP LYS GLN VAL LYS GLN VAL LEU ALA ASN GLY LYS SEQRES 6 A 251 LYS GLY ASP LEU ASN VAL GLY MET VAL LEU ILE LEU PRO SEQRES 7 A 251 GLU GLY PHE GLU LEU ALA PRO PRO ASP ARG VAL PRO ALA SEQRES 8 A 251 GLU ILE LYS GLU LYS VAL GLY ASN LEU TYR TYR GLN PRO SEQRES 9 A 251 TYR SER PRO GLU GLN LYS ASN ILE LEU VAL VAL GLY PRO SEQRES 10 A 251 VAL PRO GLY LYS LYS TYR SER GLU MET VAL VAL PRO ILE SEQRES 11 A 251 LEU SER PRO ASP PRO ALA LYS ASN LYS ASN VAL SER TYR SEQRES 12 A 251 LEU LYS TYR PRO ILE TYR PHE GLY GLY ASN ARG GLY ARG SEQRES 13 A 251 GLY LEU VAL TYR PRO ASP GLY LYS LYS SER ASN ASN THR SEQRES 14 A 251 ILE TYR ASN ALA SER ALA ALA GLY LYS ILE VAL ALA ILE SEQRES 15 A 251 THR ALA LEU SER GLU LYS LYS GLY GLY PHE GLU VAL SER SEQRES 16 A 251 ILE GLU LYS ALA ASN GLY GLU VAL VAL VAL ASP LYS ILE SEQRES 17 A 251 PRO ALA GLY PRO ASP LEU ILE VAL LYS GLU GLY GLN THR SEQRES 18 A 251 VAL GLN ALA ASP GLN PRO LEU THR ASN ASN PRO ASN VAL SEQRES 19 A 251 GLY GLY PHE GLY GLN ALA GLU THR GLU ILE VAL LEU GLN SEQRES 20 A 251 ASN PRO ALA ARG SEQRES 1 B 251 TYR PRO VAL PHE ALA GLN GLN ASN TYR ALA ASN PRO ARG SEQRES 2 B 251 GLU ALA ASN GLY ARG ILE VAL CYS ALA ASN CYS HIS LEU SEQRES 3 B 251 ALA GLN LYS ALA VAL GLU ILE GLU VAL PRO GLN ALA VAL SEQRES 4 B 251 LEU PRO ASP THR VAL PHE GLU ALA VAL ILE GLU LEU PRO SEQRES 5 B 251 TYR ASP LYS GLN VAL LYS GLN VAL LEU ALA ASN GLY LYS SEQRES 6 B 251 LYS GLY ASP LEU ASN VAL GLY MET VAL LEU ILE LEU PRO SEQRES 7 B 251 GLU GLY PHE GLU LEU ALA PRO PRO ASP ARG VAL PRO ALA SEQRES 8 B 251 GLU ILE LYS GLU LYS VAL GLY ASN LEU TYR TYR GLN PRO SEQRES 9 B 251 TYR SER PRO GLU GLN LYS ASN ILE LEU VAL VAL GLY PRO SEQRES 10 B 251 VAL PRO GLY LYS LYS TYR SER GLU MET VAL VAL PRO ILE SEQRES 11 B 251 LEU SER PRO ASP PRO ALA LYS ASN LYS ASN VAL SER TYR SEQRES 12 B 251 LEU LYS TYR PRO ILE TYR PHE GLY GLY ASN ARG GLY ARG SEQRES 13 B 251 GLY LEU VAL TYR PRO ASP GLY LYS LYS SER ASN ASN THR SEQRES 14 B 251 ILE TYR ASN ALA SER ALA ALA GLY LYS ILE VAL ALA ILE SEQRES 15 B 251 THR ALA LEU SER GLU LYS LYS GLY GLY PHE GLU VAL SER SEQRES 16 B 251 ILE GLU LYS ALA ASN GLY GLU VAL VAL VAL ASP LYS ILE SEQRES 17 B 251 PRO ALA GLY PRO ASP LEU ILE VAL LYS GLU GLY GLN THR SEQRES 18 B 251 VAL GLN ALA ASP GLN PRO LEU THR ASN ASN PRO ASN VAL SEQRES 19 B 251 GLY GLY PHE GLY GLN ALA GLU THR GLU ILE VAL LEU GLN SEQRES 20 B 251 ASN PRO ALA ARG SEQRES 1 C 251 TYR PRO VAL PHE ALA GLN GLN ASN TYR ALA ASN PRO ARG SEQRES 2 C 251 GLU ALA ASN GLY ARG ILE VAL CYS ALA ASN CYS HIS LEU SEQRES 3 C 251 ALA GLN LYS ALA VAL GLU ILE GLU VAL PRO GLN ALA VAL SEQRES 4 C 251 LEU PRO ASP THR VAL PHE GLU ALA VAL ILE GLU LEU PRO SEQRES 5 C 251 TYR ASP LYS GLN VAL LYS GLN VAL LEU ALA ASN GLY LYS SEQRES 6 C 251 LYS GLY ASP LEU ASN VAL GLY MET VAL LEU ILE LEU PRO SEQRES 7 C 251 GLU GLY PHE GLU LEU ALA PRO PRO ASP ARG VAL PRO ALA SEQRES 8 C 251 GLU ILE LYS GLU LYS VAL GLY ASN LEU TYR TYR GLN PRO SEQRES 9 C 251 TYR SER PRO GLU GLN LYS ASN ILE LEU VAL VAL GLY PRO SEQRES 10 C 251 VAL PRO GLY LYS LYS TYR SER GLU MET VAL VAL PRO ILE SEQRES 11 C 251 LEU SER PRO ASP PRO ALA LYS ASN LYS ASN VAL SER TYR SEQRES 12 C 251 LEU LYS TYR PRO ILE TYR PHE GLY GLY ASN ARG GLY ARG SEQRES 13 C 251 GLY LEU VAL TYR PRO ASP GLY LYS LYS SER ASN ASN THR SEQRES 14 C 251 ILE TYR ASN ALA SER ALA ALA GLY LYS ILE VAL ALA ILE SEQRES 15 C 251 THR ALA LEU SER GLU LYS LYS GLY GLY PHE GLU VAL SER SEQRES 16 C 251 ILE GLU LYS ALA ASN GLY GLU VAL VAL VAL ASP LYS ILE SEQRES 17 C 251 PRO ALA GLY PRO ASP LEU ILE VAL LYS GLU GLY GLN THR SEQRES 18 C 251 VAL GLN ALA ASP GLN PRO LEU THR ASN ASN PRO ASN VAL SEQRES 19 C 251 GLY GLY PHE GLY GLN ALA GLU THR GLU ILE VAL LEU GLN SEQRES 20 C 251 ASN PRO ALA ARG HET HEC A 900 43 HET HEC B 900 43 HET HEC C 900 43 HETNAM HEC HEME C HETSYN HEC HEM C FORMUL 4 HEC 3(C34 H34 FE N4 O4) FORMUL 7 HOH *277(H2 O1) HELIX 1 1 TYR A 1 TYR A 9 1 9 HELIX 2 2 VAL A 20 CYS A 24 5 5 HELIX 3 3 PRO A 85 VAL A 89 5 5 HELIX 4 4 PRO A 90 GLY A 98 1 9 HELIX 5 5 GLY A 120 SER A 124 1 5 HELIX 6 6 TYR B 1 TYR B 9 1 9 HELIX 7 7 VAL B 20 CYS B 24 5 5 HELIX 8 8 PRO B 85 VAL B 89 5 5 HELIX 9 9 PRO B 90 GLY B 98 1 9 HELIX 10 10 GLY B 120 SER B 124 1 5 HELIX 11 11 TYR C 1 TYR C 9 1 9 HELIX 12 12 VAL C 20 CYS C 24 5 5 HELIX 13 13 PRO C 85 VAL C 89 5 5 HELIX 14 14 PRO C 90 GLY C 98 1 9 HELIX 15 15 GLY C 120 SER C 124 1 5 HELIX 16 16 ASP C 134 ASN C 138 5 5 SHEET 1 A 3 GLU A 32 GLU A 34 0 SHEET 2 A 3 VAL A 44 GLU A 50 -1 N GLU A 50 O GLU A 32 SHEET 3 A 3 GLU A 125 LEU A 131 -1 N ILE A 130 O PHE A 45 SHEET 1 B 4 ILE A 112 VAL A 115 0 SHEET 2 B 4 VAL A 71 ILE A 76 -1 N LEU A 75 O LEU A 113 SHEET 3 B 4 LYS A 145 ARG A 154 -1 N ASN A 153 O GLY A 72 SHEET 4 B 4 GLY A 236 VAL A 245 -1 N ILE A 244 O TYR A 146 SHEET 1 C 3 VAL A 203 ILE A 208 0 SHEET 2 C 3 PHE A 192 GLU A 197 -1 N ILE A 196 O VAL A 204 SHEET 3 C 3 LYS A 178 ALA A 184 -1 N THR A 183 O GLU A 193 SHEET 1 D 3 GLU B 32 VAL B 35 0 SHEET 2 D 3 VAL B 44 GLU B 50 -1 N GLU B 50 O GLU B 32 SHEET 3 D 3 GLU B 125 LEU B 131 -1 N ILE B 130 O PHE B 45 SHEET 1 E 4 ILE B 112 VAL B 115 0 SHEET 2 E 4 VAL B 71 ILE B 76 -1 N LEU B 75 O LEU B 113 SHEET 3 E 4 LYS B 145 ARG B 154 -1 N ASN B 153 O GLY B 72 SHEET 4 E 4 GLY B 236 VAL B 245 -1 N ILE B 244 O TYR B 146 SHEET 1 F 3 VAL B 203 ILE B 208 0 SHEET 2 F 3 PHE B 192 GLU B 197 -1 N ILE B 196 O VAL B 204 SHEET 3 F 3 LYS B 178 ALA B 184 -1 N THR B 183 O GLU B 193 SHEET 1 G 3 GLU C 32 GLU C 34 0 SHEET 2 G 3 VAL C 44 GLU C 50 -1 N GLU C 50 O GLU C 32 SHEET 3 G 3 GLU C 125 LEU C 131 -1 N ILE C 130 O PHE C 45 SHEET 1 H 4 ILE C 112 VAL C 115 0 SHEET 2 H 4 VAL C 71 ILE C 76 -1 N LEU C 75 O LEU C 113 SHEET 3 H 4 LYS C 145 ARG C 154 -1 N ASN C 153 O GLY C 72 SHEET 4 H 4 GLY C 236 VAL C 245 -1 N ILE C 244 O TYR C 146 SHEET 1 I 3 VAL C 203 ILE C 208 0 SHEET 2 I 3 PHE C 192 GLU C 197 -1 N ILE C 196 O VAL C 204 SHEET 3 I 3 ILE C 179 ALA C 184 -1 N THR C 183 O GLU C 193 LINK SG CYS A 21 CAB HEC A 900 1555 1555 1.86 LINK SG CYS A 24 CAC HEC A 900 1555 1555 1.88 LINK FE HEC A 900 NE2 HIS A 25 1555 1555 2.15 LINK FE HEC A 900 N TYR A 1 1555 1555 2.14 LINK SG CYS B 21 CAB HEC B 900 1555 1555 1.85 LINK SG CYS B 24 CAC HEC B 900 1555 1555 1.84 LINK FE HEC B 900 N TYR B 1 1555 1555 2.11 LINK FE HEC B 900 NE2 HIS B 25 1555 1555 2.14 LINK SG CYS C 21 CAB HEC C 900 1555 1555 1.84 LINK SG CYS C 24 CAC HEC C 900 1555 1555 1.82 LINK FE HEC C 900 N TYR C 1 1555 1555 2.08 LINK FE HEC C 900 NE2 HIS C 25 1555 1555 2.09 CISPEP 1 GLY A 116 PRO A 117 0 0.42 CISPEP 2 GLY B 116 PRO B 117 0 0.15 CISPEP 3 GLY C 116 PRO C 117 0 0.27 SITE 1 AC1 22 TYR A 1 PRO A 2 PHE A 4 CYS A 21 SITE 2 AC1 22 CYS A 24 HIS A 25 GLN A 59 LEU A 69 SITE 3 AC1 22 ASN A 70 VAL A 71 GLY A 72 MET A 73 SITE 4 AC1 22 ASN A 153 GLY A 155 ARG A 156 GLY A 157 SITE 5 AC1 22 VAL A 159 TYR A 160 PRO A 161 HOH A2119 SITE 6 AC1 22 HOH A2120 GLN C 28 SITE 1 AC2 20 TYR B 1 PHE B 4 VAL B 20 CYS B 21 SITE 2 AC2 20 CYS B 24 HIS B 25 GLN B 59 ASN B 70 SITE 3 AC2 20 VAL B 71 GLY B 72 MET B 73 ASN B 153 SITE 4 AC2 20 GLY B 155 ARG B 156 GLY B 157 VAL B 159 SITE 5 AC2 20 TYR B 160 PRO B 161 HOH B2084 HOH B2085 SITE 1 AC3 20 TYR C 1 PHE C 4 TYR C 9 CYS C 21 SITE 2 AC3 20 CYS C 24 HIS C 25 GLN C 59 LEU C 69 SITE 3 AC3 20 ASN C 70 VAL C 71 GLY C 72 MET C 73 SITE 4 AC3 20 ASN C 153 GLY C 155 ARG C 156 GLY C 157 SITE 5 AC3 20 VAL C 159 TYR C 160 PRO C 161 HOH C2072 CRYST1 73.950 94.660 122.640 90.00 90.00 90.00 P 21 21 21 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013523 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010564 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008154 0.00000 MASTER 360 0 3 16 30 0 16 6 0 0 0 60 END