HEADER GUANINE NUCLEOTIDE EXCHANGE FACTOR 20-JAN-99 1B64 TITLE SOLUTION STRUCTURE OF THE GUANINE NUCLEOTIDE EXCHANGE TITLE 2 FACTOR DOMAIN FROM HUMAN ELONGATION FACTOR-ONE BETA, NMR, TITLE 3 20 STRUCTURES COMPND MOL_ID: 1; COMPND 2 MOLECULE: ELONGATION FACTOR 1-BETA; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: GUANINE EXCHANGE FACTOR DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 CELL_LINE: BL21; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET11A KEYWDS GUANINE NUCLEOTIDE EXCHANGE FACTOR, G-PROTEIN, TRANSLATION KEYWDS 2 ELONGATION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR J.M.J.PEREZ,G.SIEGAL,J.KRIEK,K.HARD,J.DIJK,G.W.CANTERS, AUTHOR 2 W.MOLLER REVDAT 2 24-FEB-09 1B64 1 VERSN REVDAT 1 18-MAY-99 1B64 0 JRNL AUTH J.M.PEREZ,G.SIEGAL,J.KRIEK,K.HARD,J.DIJK, JRNL AUTH 2 G.W.CANTERS,W.MOLLER JRNL TITL THE SOLUTION STRUCTURE OF THE GUANINE NUCLEOTIDE JRNL TITL 2 EXCHANGE DOMAIN OF HUMAN ELONGATION FACTOR 1BETA JRNL TITL 3 REVEALS A STRIKING RESEMBLANCE TO THAT OF EF-TS JRNL TITL 4 FROM ESCHERICHIA COLI. JRNL REF STRUCTURE FOLD.DES. V. 7 217 1999 JRNL REFN ISSN 0969-2126 JRNL PMID 10368288 JRNL DOI 10.1016/S0969-2126(99)80027-6 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.M.PEREZ,J.KRIEK,J.DIJK,W.MOLLER,G.SIEGAL,K.HARD, REMARK 1 AUTH 2 A.P.KALVERDA,G.W.CANTERS REMARK 1 TITL 1H, 15N AND 13C CHEMICAL SHIFT ASSIGNMENT OF THE REMARK 1 TITL 2 GUANINE NUCLEOTIDE EXCHANGE DOMAIN OF HUMAN REMARK 1 TITL 3 ELONGATION FACTOR-ONE BETA REMARK 1 REF J.BIOMOL.NMR V. 12 467 1998 REMARK 1 REFN ISSN 0925-2738 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : DYANA 1.4 REMARK 3 AUTHORS : GUNTERT,WUTHRICH REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REFINEMENT DETAILS CAN BE FOUND IN REMARK 3 THE JRNL CITATION ABOVE. REMARK 4 REMARK 4 1B64 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 6.9 REMARK 210 IONIC STRENGTH : 100 MM REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 95% H2O AND 5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : VARIOUS REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : DMX600 REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : DYANA V.1.4 V.1.4 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : LEAST RESTRAINT VIOLATION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR REMARK 210 SPECTROSCOPY OF 13C, 15N-LABELED EF-1BETA. REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LEU A 2 -83.18 -48.96 REMARK 500 1 ALA A 4 61.71 38.99 REMARK 500 1 THR A 19 102.54 -52.74 REMARK 500 1 ASP A 20 102.24 -53.17 REMARK 500 1 TYR A 48 164.84 57.49 REMARK 500 1 LEU A 53 66.91 -102.45 REMARK 500 1 ASP A 61 -79.61 62.77 REMARK 500 1 ASP A 62 26.67 -142.07 REMARK 500 1 TYR A 79 -45.48 -151.19 REMARK 500 1 SER A 82 112.97 -178.69 REMARK 500 1 ALA A 87 173.62 171.86 REMARK 500 2 LEU A 2 75.64 -107.61 REMARK 500 2 ALA A 4 83.37 70.10 REMARK 500 2 ASP A 11 89.32 -150.12 REMARK 500 2 ASP A 16 -174.28 168.09 REMARK 500 2 THR A 19 88.22 -67.23 REMARK 500 2 VAL A 46 -74.28 -111.62 REMARK 500 2 TYR A 48 -161.55 53.50 REMARK 500 2 THR A 66 27.54 -162.90 REMARK 500 2 TYR A 79 -44.03 -151.80 REMARK 500 2 SER A 82 115.65 -179.93 REMARK 500 2 ALA A 87 167.78 176.01 REMARK 500 3 ALA A 4 123.24 84.50 REMARK 500 3 ASP A 16 -171.85 -175.16 REMARK 500 3 THR A 19 101.21 -50.56 REMARK 500 3 ASP A 20 96.94 -52.74 REMARK 500 3 LEU A 53 71.44 -103.28 REMARK 500 3 TYR A 79 -44.91 -147.71 REMARK 500 3 SER A 82 114.46 173.43 REMARK 500 3 ALA A 87 171.69 177.51 REMARK 500 4 ALA A 4 111.12 76.06 REMARK 500 4 ASP A 16 -170.61 -174.88 REMARK 500 4 THR A 19 98.27 -60.75 REMARK 500 4 ASP A 20 104.32 -40.70 REMARK 500 4 SER A 40 141.96 -170.80 REMARK 500 4 VAL A 46 -62.17 -91.18 REMARK 500 4 TYR A 48 -38.22 171.10 REMARK 500 4 ASP A 62 26.08 -146.51 REMARK 500 4 LYS A 63 -70.04 -96.05 REMARK 500 4 ALA A 75 -31.99 -39.53 REMARK 500 4 TYR A 79 -44.10 -145.84 REMARK 500 4 SER A 82 115.27 170.09 REMARK 500 4 ALA A 87 170.41 179.84 REMARK 500 5 ALA A 4 84.24 80.80 REMARK 500 5 ASP A 16 -174.39 178.64 REMARK 500 5 ASP A 20 154.82 -44.90 REMARK 500 5 ALA A 22 -70.64 -60.35 REMARK 500 5 VAL A 46 -155.89 -90.41 REMARK 500 5 TYR A 48 -33.84 175.94 REMARK 500 5 LEU A 53 68.45 -115.69 REMARK 500 5 ASP A 61 -89.76 53.75 REMARK 500 5 ASP A 62 24.44 -151.91 REMARK 500 5 THR A 66 47.57 -76.41 REMARK 500 5 ASP A 67 -64.36 -96.28 REMARK 500 5 TYR A 79 -44.06 -153.73 REMARK 500 5 SER A 82 118.65 179.98 REMARK 500 5 ALA A 87 176.79 171.57 REMARK 500 6 ALA A 4 78.14 77.49 REMARK 500 6 ASP A 16 176.72 179.71 REMARK 500 6 THR A 19 106.65 -47.68 REMARK 500 6 ASP A 20 95.27 -51.41 REMARK 500 6 VAL A 28 -73.50 -44.75 REMARK 500 6 SER A 40 133.33 170.00 REMARK 500 6 VAL A 46 -71.35 -96.41 REMARK 500 6 TYR A 48 82.26 -171.60 REMARK 500 6 VAL A 58 68.77 -150.03 REMARK 500 6 ASP A 62 25.42 -155.96 REMARK 500 6 LYS A 63 -77.38 -125.05 REMARK 500 6 TYR A 79 -44.55 -148.69 REMARK 500 6 SER A 82 106.59 179.35 REMARK 500 6 ALA A 87 162.93 175.58 REMARK 500 7 LEU A 2 111.67 -163.30 REMARK 500 7 ALA A 4 82.74 56.13 REMARK 500 7 THR A 19 98.92 -42.81 REMARK 500 7 ASP A 20 95.01 -47.83 REMARK 500 7 TYR A 48 -90.21 49.79 REMARK 500 7 ASP A 61 -83.48 58.96 REMARK 500 7 ASP A 62 25.82 -142.75 REMARK 500 7 TYR A 79 -43.75 -149.09 REMARK 500 7 SER A 82 112.62 -179.49 REMARK 500 7 ALA A 87 169.93 167.60 REMARK 500 8 ALA A 4 90.90 79.90 REMARK 500 8 ASP A 16 -178.40 177.51 REMARK 500 8 VAL A 46 44.08 -148.48 REMARK 500 8 TYR A 48 96.60 -38.29 REMARK 500 8 LEU A 53 64.58 -101.40 REMARK 500 8 ASP A 61 -92.08 47.44 REMARK 500 8 ASP A 62 24.44 -146.47 REMARK 500 8 TYR A 79 -44.72 -150.31 REMARK 500 8 SER A 82 107.00 177.74 REMARK 500 8 ALA A 87 175.95 167.08 REMARK 500 9 LEU A 2 -154.70 -99.27 REMARK 500 9 ALA A 4 41.09 39.06 REMARK 500 9 THR A 19 114.23 -38.40 REMARK 500 9 ASP A 20 100.54 -59.02 REMARK 500 9 ALA A 33 62.34 -169.51 REMARK 500 9 ASP A 34 -90.24 40.87 REMARK 500 9 TRP A 38 79.66 -106.73 REMARK 500 9 SER A 40 129.27 161.88 REMARK 500 9 LEU A 53 72.68 -100.46 REMARK 500 9 ASP A 62 24.59 -155.06 REMARK 500 9 LYS A 63 -78.60 -126.38 REMARK 500 9 THR A 66 -40.79 -164.63 REMARK 500 9 TYR A 79 -43.13 -154.68 REMARK 500 9 SER A 82 117.53 163.45 REMARK 500 9 ALA A 87 145.27 173.64 REMARK 500 10 ALA A 4 98.88 64.76 REMARK 500 10 ASP A 16 -172.98 174.41 REMARK 500 10 THR A 19 108.46 -46.60 REMARK 500 10 ASP A 20 92.29 -55.27 REMARK 500 10 LEU A 53 74.88 -109.45 REMARK 500 10 ASP A 61 -85.62 59.31 REMARK 500 10 TYR A 79 -42.85 -142.05 REMARK 500 10 SER A 82 103.52 171.16 REMARK 500 10 ALA A 87 176.27 173.95 REMARK 500 11 LEU A 2 99.20 63.33 REMARK 500 11 ALA A 4 80.13 72.58 REMARK 500 11 THR A 19 104.10 -59.97 REMARK 500 11 ILE A 31 123.62 -39.97 REMARK 500 11 TYR A 48 86.71 37.98 REMARK 500 11 VAL A 58 76.12 -119.92 REMARK 500 11 ASP A 62 24.78 -141.62 REMARK 500 11 LYS A 63 -77.23 -131.88 REMARK 500 11 TYR A 79 -44.50 -144.19 REMARK 500 11 SER A 82 118.81 173.68 REMARK 500 11 ALA A 87 161.34 168.24 REMARK 500 12 LEU A 2 44.90 70.06 REMARK 500 12 ALA A 4 96.30 63.64 REMARK 500 12 ASP A 16 175.80 174.30 REMARK 500 12 THR A 19 96.43 -56.38 REMARK 500 12 TYR A 48 87.66 -155.77 REMARK 500 12 LEU A 53 61.74 -116.05 REMARK 500 12 TYR A 79 -43.85 -154.68 REMARK 500 12 SER A 82 111.78 174.56 REMARK 500 13 LEU A 2 50.66 -163.30 REMARK 500 13 ALA A 4 78.30 89.20 REMARK 500 13 ASP A 16 -171.11 166.49 REMARK 500 13 THR A 19 97.83 -62.44 REMARK 500 13 ASP A 20 154.82 -41.75 REMARK 500 13 ILE A 31 122.11 -39.49 REMARK 500 13 SER A 40 131.07 -176.67 REMARK 500 13 VAL A 46 -47.43 -135.80 REMARK 500 13 LEU A 53 60.56 -105.37 REMARK 500 13 ASP A 67 -71.06 -112.82 REMARK 500 13 TYR A 79 -44.14 -154.99 REMARK 500 13 SER A 82 112.78 172.18 REMARK 500 13 ALA A 87 149.51 -175.71 REMARK 500 14 ALA A 4 53.02 38.54 REMARK 500 14 ASP A 16 166.81 177.30 REMARK 500 14 THR A 19 102.80 -57.58 REMARK 500 14 ASP A 20 102.93 -48.33 REMARK 500 14 VAL A 46 58.66 -148.61 REMARK 500 14 TYR A 48 106.28 -37.22 REMARK 500 14 LEU A 53 75.36 -114.08 REMARK 500 14 ASP A 61 -86.91 57.70 REMARK 500 14 ILE A 73 -83.25 -56.72 REMARK 500 14 TYR A 79 -42.03 -155.44 REMARK 500 14 SER A 82 119.89 167.30 REMARK 500 15 ALA A 4 90.68 83.52 REMARK 500 15 ASP A 16 170.94 167.34 REMARK 500 15 THR A 19 102.59 -43.92 REMARK 500 15 ASP A 20 105.24 -49.69 REMARK 500 15 SER A 40 135.53 160.98 REMARK 500 15 ASP A 62 25.20 -155.88 REMARK 500 15 LYS A 63 -76.51 -125.73 REMARK 500 15 ASP A 67 -72.72 -44.12 REMARK 500 15 ALA A 75 -30.33 -39.44 REMARK 500 15 TYR A 79 -41.56 -151.77 REMARK 500 15 SER A 82 112.91 169.61 REMARK 500 15 ALA A 87 -177.57 -178.25 REMARK 500 16 ALA A 4 86.77 72.90 REMARK 500 16 ASP A 16 -176.49 173.63 REMARK 500 16 ALA A 33 147.67 -171.95 REMARK 500 16 SER A 40 148.32 174.72 REMARK 500 16 VAL A 46 -85.58 -84.48 REMARK 500 16 TYR A 48 -157.35 -77.19 REMARK 500 16 LEU A 53 75.46 -100.63 REMARK 500 16 VAL A 58 73.43 -153.50 REMARK 500 16 ASP A 62 25.83 -151.69 REMARK 500 16 LYS A 63 -89.67 -113.15 REMARK 500 16 THR A 66 -40.15 -170.86 REMARK 500 16 TYR A 79 -44.02 -145.31 REMARK 500 16 SER A 82 128.46 -179.85 REMARK 500 16 ALA A 87 161.10 164.90 REMARK 500 17 THR A 19 99.45 -56.63 REMARK 500 17 ILE A 31 127.08 -39.96 REMARK 500 17 TYR A 48 -34.03 175.25 REMARK 500 17 LEU A 53 73.74 -112.95 REMARK 500 17 VAL A 58 78.80 -151.23 REMARK 500 17 ASP A 62 26.30 -160.42 REMARK 500 17 LYS A 63 -64.42 -132.33 REMARK 500 17 THR A 66 42.06 35.09 REMARK 500 17 ASP A 67 -60.01 -101.03 REMARK 500 17 PHE A 76 79.18 -111.51 REMARK 500 17 TYR A 79 -43.80 -155.03 REMARK 500 17 SER A 82 112.42 172.89 REMARK 500 17 PHE A 88 88.26 -153.89 REMARK 500 18 ALA A 4 77.43 88.65 REMARK 500 18 ASP A 16 -176.50 -178.47 REMARK 500 18 ASP A 20 95.02 -52.88 REMARK 500 18 LEU A 53 68.63 -102.74 REMARK 500 18 CYS A 57 -166.97 -116.63 REMARK 500 18 VAL A 58 59.82 -151.39 REMARK 500 18 ASP A 62 25.55 -144.55 REMARK 500 18 LYS A 63 -92.46 -131.58 REMARK 500 18 ASP A 67 -77.32 -39.18 REMARK 500 18 TYR A 79 -41.50 -147.62 REMARK 500 18 SER A 82 113.41 168.57 REMARK 500 18 ALA A 87 145.54 -176.29 REMARK 500 18 PHE A 88 85.73 -155.46 REMARK 500 19 LEU A 2 109.05 -44.93 REMARK 500 19 ALA A 4 83.32 84.12 REMARK 500 19 ASP A 16 166.81 163.09 REMARK 500 19 THR A 19 101.68 -39.98 REMARK 500 19 ASP A 20 99.35 -51.24 REMARK 500 19 VAL A 46 -70.14 -106.35 REMARK 500 19 TYR A 48 -63.24 68.61 REMARK 500 19 VAL A 58 77.01 -108.83 REMARK 500 19 ASP A 62 -67.62 -91.02 REMARK 500 19 ASP A 67 -72.86 -44.16 REMARK 500 19 TYR A 79 -43.87 -149.34 REMARK 500 19 SER A 82 131.69 -176.97 REMARK 500 19 PHE A 88 89.47 -152.68 REMARK 500 20 LEU A 2 98.89 58.07 REMARK 500 20 ALA A 4 80.66 75.64 REMARK 500 20 THR A 19 95.50 -49.93 REMARK 500 20 TYR A 48 -64.71 68.73 REMARK 500 20 LEU A 53 69.61 -108.63 REMARK 500 20 ASP A 61 -68.12 68.28 REMARK 500 20 ASP A 62 27.64 -155.13 REMARK 500 20 TYR A 79 -44.63 -153.20 REMARK 500 20 SER A 82 115.49 174.46 REMARK 500 20 ALA A 87 173.37 170.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: GEF REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: INVOLVED WITH GEF REACTION ON EF-1APHA. DBREF 1B64 A 2 91 UNP P24534 EF1B_HUMAN 135 224 SEQRES 1 A 91 MET LEU VAL ALA LYS SER SER ILE LEU LEU ASP VAL LYS SEQRES 2 A 91 PRO TRP ASP ASP GLU THR ASP MET ALA LYS LEU GLU GLU SEQRES 3 A 91 CYS VAL ARG SER ILE GLN ALA ASP GLY LEU VAL TRP GLY SEQRES 4 A 91 SER SER LYS LEU VAL PRO VAL GLY TYR GLY ILE LYS LYS SEQRES 5 A 91 LEU GLN ILE GLN CYS VAL VAL GLU ASP ASP LYS VAL GLY SEQRES 6 A 91 THR ASP MET LEU GLU GLU GLN ILE THR ALA PHE GLU ASP SEQRES 7 A 91 TYR VAL GLN SER MET ASP VAL ALA ALA PHE ASN LYS ILE HELIX 1 H1 ALA A 22 SER A 30 1 9 HELIX 2 H2 THR A 66 THR A 74 1 9 SHEET 1 S1 4 VAL A 37 PRO A 45 0 SHEET 2 S1 4 ILE A 50 GLN A 56 -1 SHEET 3 S1 4 LYS A 5 PRO A 14 -1 SHEET 4 S1 4 VAL A 80 LYS A 90 -1 SITE 1 GEF 1 TYR A 48 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL MASTER 309 0 0 2 4 0 1 6 0 0 0 7 END