JenaLib Home    
[Image Library Home]     [Helix Analysis Home]     [Image Library Entry]     [Helix Analysis Entry]   

Sequence, Chains, Units

Title CRYSTAL STRUCTURE OF AUUCU REPEATING RNA THAT CAUSES SPINOCE ATAXIA TYPE 10 (SCA10)
Keywords NUCLEIC ACIDS, RNA STRUCTURE, REPEAT EXPANSION DISORDER, GEN DISEASE, RNA
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   5BTM     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 43 906 0
2  RNA    B 43 906 0
3  Ligand   RNA (55-MER)  A 2 0 2
4  Ligand   RNA (55-MER)  B 3 0 3
5 Water     1 0 1
total       92 1812 6
Nucleic acids
Unit 1   U8 A9 U10 U11 C12 U13 A14 U15 C16 G17 G18 C19 U20 A21 A22 G23 G24 A25 U26 G27 A28 A29 A30 G31 U32 C33 U34 A35 U36 G37 C38 C39 G40 A41 U42 U43 C44 U45 A46 U47 U48 C49 U50
Unit 2   U8 A9 U10 U11 C12 U13 A14 U15 C16 G17 G18 C19 U20 A21 A22 G23 G24 A25 U26 G27 A28 A29 A30 G31 U32 C33 U34 A35 U36 G37 C38 C39 G40 A41 U42 U43 C44 U45 A46 U47 U48 C49 U50
Ligands
Unit 3   MG101 NA102
Unit 4   MG101 MG102 NA103
Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.

Go to    [Image Library Home]    [Helix Analysis Home]    [Image Library Entry]    [Helix Analysis Entry]   
Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany