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| Title | CRYSTAL STRUCTURE OF THE BACTERIAL RIBOSOMAL DECODING SITE I WITH 4'-DEOXY-4'-FLUORO NEOMYCIN ANALOG | |
| Keywords | RIBOSOME, AMINOGLYCOSIDE, RNA-ANTIBIOTIC COMPLEX | |
| Experiment | X-ray diffraction | |
| Number of Models | 1 |
| Database | ID code | Status | Coordinate files | ||
| Header | Asymmetric unit | Biological unit | |||
| PDB | 4PDQ | released | available | available | Quaternary Structure Server |
| Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
|---|---|---|---|---|---|---|
| 1 | RNA | A | 23 | 487 | 0 | |
| 2 | RNA | B | 23 | 487 | 0 | |
| 3 | Ligand | RNA (5'- *UP*UP*GP*CP*GP*UP*CP*AP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP*U 3') | A | 1 | 0 | 1 |
| 4 | Ligand | RNA (5'- *UP*UP*GP*CP*GP*UP*CP*AP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP*U 3') | B | 2 | 0 | 50 |
| 5 | Water | 1 | 0 | 1 | ||
| total | 50 | 974 | 52 |
| Unit 1 | U1 | U2 | G3 | C4 | G5 | U6 | C7 | A8 | C9 | G10 | C11 | C12 | G13 | G14 | C15 | G16 | A17 | A18 | G19 | U20 | C21 | G22 | C23 |
| Unit 2 | U24 | U25 | G26 | C27 | G28 | U29 | C30 | A31 | C32 | G33 | C34 | C35 | G36 | G37 | C38 | G39 | A40 | A41 | G42 | U43 | C44 | G45 | C46 |
| Unit 3 | MG101 | |
| Unit 4 | NMZ101 | MG102 |
Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.
| Go to | [Image Library Home] [Helix Analysis Home] [Image Library Entry] [Helix Analysis Entry] |
| Perl script: | PDBscan.pl (15 Sep 2016) |
| Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |