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Title | CRYSTAL STRUCTURE OF DOUBLE-STRANDED RNA WITH FOUR TERMINAL BASE PAIRS | |
Keywords | GU WOBBLE BASE PAIR MOTIF, RNA | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 4PCO | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | RNA | A | 10 | 320 | 0 | |
2 | RNA | B | 10 | 320 | 0 | |
3 | RNA | C | 10 | 309 | 0 | |
4 | RNA | D | 10 | 319 | 0 | |
5 | RNA | E | 10 | 320 | 0 | |
6 | Ligand | RNA (5'-D(*GP*GP*UP*GP*GP*CP*UP*GP*UP*U)-3') | A | 5 | 0 | 23 |
7 | Ligand | RNA (5'-D(*GP*GP*UP*GP*GP*CP*UP*GP*UP*U)-3') | B | 4 | 0 | 22 |
8 | Ligand | RNA (5'-D(*GP*GP*UP*GP*GP*CP*UP*GP*UP*U)-3') | C | 3 | 0 | 21 |
9 | Ligand | RNA (5'-D(*GP*GP*UP*GP*GP*CP*UP*GP*UP*U)-3') | D | 1 | 0 | 7 |
10 | Ligand | RNA (5'-D(*GP*GP*UP*GP*GP*CP*UP*GP*UP*U)-3') | E | 2 | 0 | 14 |
11 | Water | 190 | 0 | 190 | ||
total | 255 | 1588 | 277 |
Unit 1 | G1 | G2 | U3 | G4 | G5 | C6 | U7 | G8 | U9 | U10 |
Unit 2 | G1 | G2 | U3 | G4 | G5 | C6 | U7 | G8 | U9 | U10 |
Unit 3 | G1 | G2 | U3 | G4 | G5 | C6 | U7 | G8 | U9 | U10 |
Unit 4 | G1 | G2 | U3 | G4 | G5 | C6 | U7 | G8 | U9 | U10 |
Unit 5 | G1 | G2 | U3 | G4 | G5 | C6 | U7 | G8 | U9 | U10 |
Unit 6 | NCO101 | NCO102 | NCO103 | CL104 | CL105 |
Unit 7 | NCO101 | NCO102 | NCO103 | CL104 | |
Unit 8 | NCO101 | NCO102 | NCO103 | ||
Unit 9 | NCO101 | ||||
Unit 10 | NCO101 | NCO102 |
Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.
Go to | [Image Library Home] [Helix Analysis Home] [Image Library Entry] [Helix Analysis Entry] |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |