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Sequence, Chains, Units

Title CRYSTAL STRUCTURE OF MANGANESE BOUND M-BOX RNA
Keywords MANGANESE-RNA COMPLEX, RNA
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3PDR     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    X 161 3431 0
2  RNA    A 161 3431 0
3  Ligand   M-BOX RIBOSWITCH RNA  X 15 0 15
4  Ligand   M-BOX RIBOSWITCH RNA  A 16 0 16
5 Water     548 0 548
total       901 6862 579
Nucleic acids
Unit 1   G15 G16 G17 C18 U19 U20 C21 G22 U23 U24 A25 G26 G27 U28 G29 A30 G31 G32 C33 U34 C35 C36 U37 G38 U39 A40 U41 G42 G43 A44 G45 A46 U47 A48 C49 G50 C51 U52 G53 C54 U55 G56 C57 C58 C59 A60 A61 A62 A63 A64 U65 G66 U67 C68 C69 A70 A71 A72 G73 A74 C75 G76 C77 C78 A79 A80 U81 G82 G83 G84 U85 C86 A87 A88 C89 A90 G91 A92 A93 A94 U95 C96 A97 U98 C99 G100 A101 C102 A103 U104 A105 A106 G107 G108 U109 G110 A111 U112 U113 U114 U115 U116 A117 A118 U119 G120 C121 A122 G123 C124 U125 G126 G127 A128 U129 G130 C131 U132 U133 G134 U135 C136 C137 U138 A139 U140 G141 C142 C143 A144 U145 A146 C147 A148 G149 U150 G151 C152 U153 A154 A155 A156 G157 C158 U159 C160 U161 A162 C163 G164 A165 U166 U167 G168 A169 A170 G171 C172 C173 C174 A175
Unit 2   G15 G16 G17 C18 U19 U20 C21 G22 U23 U24 A25 G26 G27 U28 G29 A30 G31 G32 C33 U34 C35 C36 U37 G38 U39 A40 U41 G42 G43 A44 G45 A46 U47 A48 C49 G50 C51 U52 G53 C54 U55 G56 C57 C58 C59 A60 A61 A62 A63 A64 U65 G66 U67 C68 C69 A70 A71 A72 G73 A74 C75 G76 C77 C78 A79 A80 U81 G82 G83 G84 U85 C86 A87 A88 C89 A90 G91 A92 A93 A94 U95 C96 A97 U98 C99 G100 A101 C102 A103 U104 A105 A106 G107 G108 U109 G110 A111 U112 U113 U114 U115 U116 A117 A118 U119 G120 C121 A122 G123 C124 U125 G126 G127 A128 U129 G130 C131 U132 U133 G134 U135 C136 C137 U138 A139 U140 G141 C142 C143 A144 U145 A146 C147 A148 G149 U150 G151 C152 U153 A154 A155 A156 G157 C158 U159 C160 U161 A162 C163 G164 A165 U166 U167 G168 A169 A170 G171 C172 C173 C174 A175
Ligands
Unit 3   K1 K2 K3 MN4 MN7 MN9 MN10 MN12 MN13 MN14 MN176 MN177 MN178 MN179 MN180
Unit 4   K1 K2 K3 MN4 MN5 MN6 MN7 MN9 MN10 MN11 MN12 MN13 MN176 MN177 MN178 MN179
Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany