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Sequence, Chains, Units

Title CRYSTAL STRUCTURE OF RESTON EBOLAVIRUS VP35 RNA BINDING DOMA COMPLEX WITH 18BP DSRNA
Keywords EBOLAVIRUS, RNA-BINDING PROTEIN, PROTEIN-RNA COMPLEX, INTERF RESTON, HOST CYTOPLASM, INTERFERON ANTIVIRAL SYSTEM EVASION REPLICATION, RNA-BINDING, TRANSCRIPTION, VIRION, VIRAL PROT COMPLEX
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3KS8     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    E 18 404 0
2  RNA    F 18 357 0
3  Protein   POLYMERASE COFACTOR VP35  A 122 952 0
4  Protein   POLYMERASE COFACTOR VP35  B 124 971 0
5  Protein   POLYMERASE COFACTOR VP35  C 122 952 0
6  Protein   POLYMERASE COFACTOR VP35  D 124 971 0
7 Water     150 0 150
total       678 4607 150
Proteins
Unit 3   ILE208 SER209 ALA210 LYS211 ASP212 LEU213 LYS214 GLU215 ILE216 MET217 TYR218 ASP219 HIS220 LEU221 PRO222 GLY223 PHE224 GLY225 THR226 ALA227 PHE228 HIS229 GLN230 LEU231 VAL232 GLN233 VAL234 ILE235 CYS236 LYS237 ILE238 GLY239 LYS240 ASP241 ASN242 ASN243 LEU244 LEU245 ASP246 THR247 ILE248 HIS249 ALA250 GLU251 PHE252 GLN253 ALA254 SER255 LEU256 ALA257 ASP258 GLY259 ASP260 SER261 PRO262 GLN263 CYS264 ALA265 LEU266 ILE267 GLN268 ILE269 THR270 LYS271 ARG272 VAL273 PRO274 ILE275 PHE276 GLN277 ASP278 VAL279 PRO280 PRO281 PRO282 ILE283 ILE284 HIS285 ILE286 ARG287 SER288 ARG289 GLY290 ASP291 ILE292 PRO293 ARG294 ALA295 CYS296 GLN297 LYS298 SER299 LEU300 ARG301 PRO302 ALA303 PRO304 PRO305 SER306 PRO307 LYS308 ILE309 ASP310 ARG311 GLY312 TRP313 VAL314 CYS315 LEU316 PHE317 LYS318 MET319 GLN320 ASP321 GLY322 LYS323 THR324 LEU325 GLY326 LEU327 LYS328 ILE329
Unit 4   PRO206 TYR207 ILE208 SER209 ALA210 LYS211 ASP212 LEU213 LYS214 GLU215 ILE216 MET217 TYR218 ASP219 HIS220 LEU221 PRO222 GLY223 PHE224 GLY225 THR226 ALA227 PHE228 HIS229 GLN230 LEU231 VAL232 GLN233 VAL234 ILE235 CYS236 LYS237 ILE238 GLY239 LYS240 ASP241 ASN242 ASN243 LEU244 LEU245 ASP246 THR247 ILE248 HIS249 ALA250 GLU251 PHE252 GLN253 ALA254 SER255 LEU256 ALA257 ASP258 GLY259 ASP260 SER261 PRO262 GLN263 CYS264 ALA265 LEU266 ILE267 GLN268 ILE269 THR270 LYS271 ARG272 VAL273 PRO274 ILE275 PHE276 GLN277 ASP278 VAL279 PRO280 PRO281 PRO282 ILE283 ILE284 HIS285 ILE286 ARG287 SER288 ARG289 GLY290 ASP291 ILE292 PRO293 ARG294 ALA295 CYS296 GLN297 LYS298 SER299 LEU300 ARG301 PRO302 ALA303 PRO304 PRO305 SER306 PRO307 LYS308 ILE309 ASP310 ARG311 GLY312 TRP313 VAL314 CYS315 LEU316 PHE317 LYS318 MET319 GLN320 ASP321 GLY322 LYS323 THR324 LEU325 GLY326 LEU327 LYS328 ILE329
Unit 5   ILE208 SER209 ALA210 LYS211 ASP212 LEU213 LYS214 GLU215 ILE216 MET217 TYR218 ASP219 HIS220 LEU221 PRO222 GLY223 PHE224 GLY225 THR226 ALA227 PHE228 HIS229 GLN230 LEU231 VAL232 GLN233 VAL234 ILE235 CYS236 LYS237 ILE238 GLY239 LYS240 ASP241 ASN242 ASN243 LEU244 LEU245 ASP246 THR247 ILE248 HIS249 ALA250 GLU251 PHE252 GLN253 ALA254 SER255 LEU256 ALA257 ASP258 GLY259 ASP260 SER261 PRO262 GLN263 CYS264 ALA265 LEU266 ILE267 GLN268 ILE269 THR270 LYS271 ARG272 VAL273 PRO274 ILE275 PHE276 GLN277 ASP278 VAL279 PRO280 PRO281 PRO282 ILE283 ILE284 HIS285 ILE286 ARG287 SER288 ARG289 GLY290 ASP291 ILE292 PRO293 ARG294 ALA295 CYS296 GLN297 LYS298 SER299 LEU300 ARG301 PRO302 ALA303 PRO304 PRO305 SER306 PRO307 LYS308 ILE309 ASP310 ARG311 GLY312 TRP313 VAL314 CYS315 LEU316 PHE317 LYS318 MET319 GLN320 ASP321 GLY322 LYS323 THR324 LEU325 GLY326 LEU327 LYS328 ILE329
Unit 6   PRO206 TYR207 ILE208 SER209 ALA210 LYS211 ASP212 LEU213 LYS214 GLU215 ILE216 MET217 TYR218 ASP219 HIS220 LEU221 PRO222 GLY223 PHE224 GLY225 THR226 ALA227 PHE228 HIS229 GLN230 LEU231 VAL232 GLN233 VAL234 ILE235 CYS236 LYS237 ILE238 GLY239 LYS240 ASP241 ASN242 ASN243 LEU244 LEU245 ASP246 THR247 ILE248 HIS249 ALA250 GLU251 PHE252 GLN253 ALA254 SER255 LEU256 ALA257 ASP258 GLY259 ASP260 SER261 PRO262 GLN263 CYS264 ALA265 LEU266 ILE267 GLN268 ILE269 THR270 LYS271 ARG272 VAL273 PRO274 ILE275 PHE276 GLN277 ASP278 VAL279 PRO280 PRO281 PRO282 ILE283 ILE284 HIS285 ILE286 ARG287 SER288 ARG289 GLY290 ASP291 ILE292 PRO293 ARG294 ALA295 CYS296 GLN297 LYS298 SER299 LEU300 ARG301 PRO302 ALA303 PRO304 PRO305 SER306 PRO307 LYS308 ILE309 ASP310 ARG311 GLY312 TRP313 VAL314 CYS315 LEU316 PHE317 LYS318 MET319 GLN320 ASP321 GLY322 LYS323 THR324 LEU325 GLY326 LEU327 LYS328 ILE329
Nucleic acids
Unit 1   A1 G2 A3 A4 G5 G6 A7 G8 G9 G10 A11 G12 G13 G14 A15 G16 G17 A18
Unit 2   U1 C2 C3 U4 C5 C6 C7 U8 C9 C10 C11 U12 C13 C14 U15 U16 C17 U18
Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany