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Sequence, Chains, Units

Title THE STRUCTURE OF RNA INTERNAL LOOPS WITH TANDEM AG PAIRS: 5'GAGC/3'CGAG
Keywords TANDEM AG PAIRS, THERMODYNAMICS, IMINO AG PAIR, DUAL SYN GG EXTRAHELICAL U, RNA
Experiment NMR
Number of Models  10


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2KY0     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 11 357 0
2  RNA    B 11 357 0
total       22 714 0

Nucleic acids
Unit 1   G1 A2 C3 G4 A5 G6 C7 G8 U9 C10 A11
Unit 2   G12 A13 C14 G15 A16 G17 C18 G19 U20 C21 A22

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany