JenaLib Home    
[Image Library Home]     [Helix Analysis Home]     [Image Library Entry]     [Helix Analysis Entry]   

Sequence, Chains, Units

Title LINEAR DIMER OF STEMLOOP SL1 FROM HIV-1
Keywords LINEAR DIMER, A-RICH INTERNAL LOOP, G-RICH INTERNAL LOOP
Experiment NMR
Number of Models  10

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   2GM0     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 35 1136 0
2  RNA    B 35 1136 0
total       70 2272 0
Nucleic acids
Unit 1   G1 A2 C3 G4 G5 C6 U7 U8 G9 C10 U11 G12 A13 A14 G15 C16 G17 C18 G19 C20 A21 C22 G23 G24 C25 A26 A27 G28 A29 G30 G31 C32 G33 U34 C35
Unit 2   G36 A37 C38 G39 G40 C41 U42 U43 G44 C45 U46 G47 A48 A49 G50 C51 G52 C53 G54 C55 A56 C57 G58 G59 C60 A61 A62 G63 A64 G65 G66 C67 G68 U69 C70
Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.

Go to    [Image Library Home]    [Helix Analysis Home]    [Image Library Entry]    [Helix Analysis Entry]   
Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany