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| Title | CRYSTAL STRUCTURE OF THE HOMO SAPIENS CYTOPLASMIC RIBOSOMAL DECODING SITE COMPLEXED WITH APRAMYCIN | |
| Keywords | AMINOGLYCOSIDE, ANTIBIOTICS, APRAMYCIN, RIBOSOME, DECODING SITE, HOMO SAPIENS, CYTOPLASM, RNA | |
| Experiment | X-ray diffraction | |
| Number of Models | 1 |
| Database | ID code | Status | Coordinate files | ||
| Header | Asymmetric unit | Biological unit | |||
| PDB | 2G5K | released | available | available | Quaternary Structure Server |
| Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
|---|---|---|---|---|---|---|
| 1 | RNA | A | 22 | 469 | 0 | |
| 2 | RNA | B | 22 | 469 | 0 | |
| 3 | Ligand | 5'- R(*UP*UP*GP*CP*GP*UP*CP*GP*CP*UP*CP*CP*GP*GP*AP*AP*AP*AP*GP *UP*CP*GP*C)-3' | A | 3 | 0 | 45 |
| 4 | Ligand | 5'- R(*UP*UP*GP*CP*GP*UP*CP*GP*CP*UP*CP*CP*GP*GP*AP*AP*AP*AP*GP *UP*CP*GP*C)-3' | B | 3 | 0 | 45 |
| 5 | Water | 27 | 0 | 27 | ||
| total | 77 | 938 | 117 |
| Unit 1 | U2 | G3 | C4 | G5 | U6 | C7 | G8 | C9 | U10 | C11 | C12 | G13 | G14 | A15 | A16 | A17 | A18 | G19 | U20 | C21 | G22 | C23 |
| Unit 2 | U25 | G26 | C27 | G28 | U29 | C30 | G31 | C32 | U33 | C34 | C35 | G36 | G37 | A38 | A39 | A40 | A41 | G42 | U43 | C44 | G45 | C46 |
| Unit 3 | AM2102 | NCO202 | MG301 |
| Unit 4 | AM2101 | NCO201 | MG302 |
Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.
| Go to | [Image Library Home] [Helix Analysis Home] [Image Library Entry] [Helix Analysis Entry] |
| Perl script: | PDBscan.pl (15 Sep 2016) |
| Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |