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Sequence, Chains, Units

Title SOLUTION RNA STRUCTURE MODEL OF THE HIV-1 DIMERIZATION INITIATION SITE IN THE EXTENDED-DUPLEX DIMER
Keywords DIS, HIV-1, RNA, STRUCTURE, NMR
Experiment NMR
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   2D1A     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 39 1263 0
2  RNA    B 39 1263 0
total       78 2526 0
Nucleic acids
Unit 1   G1 G2 G3 U4 C5 G6 G7 C8 U9 U10 G11 C12 U13 G14 A15 A16 G17 U18 G19 C20 A21 C22 A23 C24 G25 G26 C27 A28 A29 G30 A31 G32 G33 C34 G35 A36 C37 C38 C39
Unit 2   G1 G2 G3 U4 C5 G6 G7 C8 U9 U10 G11 C12 U13 G14 A15 A16 G17 U18 G19 C20 A21 C22 A23 C24 G25 G26 C27 A28 A29 G30 A31 G32 G33 C34 G35 A36 C37 C38 C39
Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany