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Sequence, Chains, Units

Title SOLUTION RNA STRUCTURE OF LOOP REGION OF THE HIV-1 DIMERIZATION INITIATION SITE IN THE KISSING-LOOP DIMER
Keywords DIS, HIV-1, RNA, STRUCTURE, NMR
Experiment NMR
Number of Models  11


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2D19     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 17 549 0
2  RNA    B 17 549 0
total       34 1098 0

Nucleic acids
Unit 1   G1 C2 U3 G4 A5 A6 G7 U8 G9 C10 A11 C12 A13 C14 G15 G16 C17
Unit 2   G1 C2 U3 G4 A5 A6 G7 U8 G9 C10 A11 C12 A13 C14 G15 G16 C17

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany