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Sequence, Chains, Units

Title CRYSTAL STRUCTURE OF 16 BASE PAIR RNA DUPLEX CONTAINING A C-
Keywords RNA, DUPLEX, MISMATCH
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1Z7F     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 16 336 0
2  RNA    B 16 336 0
3  RNA    C 16 336 0
4  Ligand    A 1 0 1
5  Ligand    C 1 0 1
6 Water     67 0 67
total       117 1008 69

Nucleic acids
Unit 1   G1 C2 A3 G4 A5 C6 U7 U8 A9 A10 A11 U12 C13 U14 G15 C16
Unit 2   G1 C2 A3 G4 A5 C6 U7 U8 A9 A10 A11 U12 C13 U14 G15 C16
Unit 3   G17 C18 A19 G20 A21 C22 U23 U24 A25 A26 A27 U28 C29 U30 G31 C32

Ligands
Unit 4   SR17
Unit 5   SR2

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany