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Sequence, Chains, Units

Title HIV-1 DIS(MAL) DUPLEX CO HEXAMINE-SOAKED
Keywords HIV-1, RNA, METAL IONS
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1Y6T     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 23 490 0
2  RNA    B 23 490 0
3  Ligand   5'- R(*CP*UP*UP*GP*CP*UP*GP*AP*GP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP *CP*AP*AP*G)-3'  A 2 0 2
4  Ligand   5'- R(*CP*UP*UP*GP*CP*UP*GP*AP*GP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP *CP*AP*AP*G)-3'  B 5 0 5
5 Water     33 0 33
total       86 980 40
Nucleic acids
Unit 1   C1 U2 U3 G4 C5 U6 G7 A8 G9 G10 U11 G12 C13 A14 C15 A16 C17 A18 G19 C20 A21 A22 G23
Unit 2   C1 U2 U3 G4 C5 U6 G7 A8 G9 G10 U11 G12 C13 A14 C15 A16 C17 A18 G19 C20 A21 A22 G23
Ligands
Unit 3   3CO901 3CO902
Unit 4   NA120 NA130 3CO900 3CO906 3CO909
Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany